FFCP PHASE1:Hg19::chr10:30024802..30024871,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6840 | |EntrezGene=6840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11480 | |HGNC=11480 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-69bp_to_ENST00000375400_5end | |association_with_transcript=-69bp_to_ENST00000375400_5end | ||
|cluster_id=chr10:30024802..30024871,- | |||
|coexpression_cluster_id=C612 | |||
|description=CAGE_peak_5_at_SVIL_5end | |description=CAGE_peak_5_at_SVIL_5end | ||
|id=chr10:30024802..30024871,- | |id=chr10:30024802..30024871,- | ||
|ontology_enrichment_celltype=CL:0002057!7.69e-17!42;CL:0000860!1.11e-14!45;CL:0000791!1.11e-08!18;CL:0000789!1.11e-08!18;CL:0002420!1.11e-08!18;CL:0002419!1.11e-08!18;CL:0000790!1.11e-08!18;CL:0000766!5.82e-08!76;CL:0000738!3.58e-07!140 | |ontology_enrichment_celltype=CL:0002057!7.69e-17!42;CL:0000860!1.11e-14!45;CL:0000791!1.11e-08!18;CL:0000789!1.11e-08!18;CL:0002420!1.11e-08!18;CL:0002419!1.11e-08!18;CL:0000790!1.11e-08!18;CL:0000766!5.82e-08!76;CL:0000738!3.58e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.88e-12;33!CL:0002057;4.88e-12;33!CL:0000791;1.05e-08;18!CL:0000789;1.05e-08;18!CL:0002419;1.05e-08;18!CL:0000576;5.68e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.93e-17,42;CL:0002057,5.93e-17,42;CL:0000473,1.25e-11,48;CL:0000234,1.25e-11,48;CL:0000766,1.99e-09,72;CL:0000791,9.79e-09,18;CL:0000789,9.79e-09,18;CL:0002420,9.79e-09,18;CL:0002419,9.79e-09,18;CL:0000790,9.79e-09,18;CL:0000738,1.21e-08,136;CL:0002009,8.36e-08,61;CL:0000557,2.89e-07,67;CL:0002194,4.69e-07,59;CL:0000576,4.69e-07,59;CL:0000040,4.69e-07,59;CL:0000559,4.69e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;2.29e-12;42!CL:0000790;1.05e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.27e-09!112;UBERON:0002390!1.14e-08!102;UBERON:0003061!1.14e-08!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.54e-10,108;UBERON:0002390,4.03e-10,98;UBERON:0003061,4.03e-10,98;UBERON:0002405,9.57e-07,93 | |||
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| ||
|short_description=p5@SVIL | |short_description=p5@SVIL | ||
}} | }} |
Latest revision as of 21:26, 17 September 2015
Short description: | p5@SVIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SVIL_5end |
Coexpression cluster: | C612_Neutrophils_Eosinophils_granulocyte_CD14_CD4_acute_CD19 |
Association with transcript: | -69bp_to_ENST00000375400_5end |
EntrezGene: | SVIL |
HGNC: | 11480 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.93e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.93e-17 | 42 |
defensive cell | 1.25e-11 | 48 |
phagocyte | 1.25e-11 | 48 |
myeloid leukocyte | 1.99e-09 | 72 |
mature alpha-beta T cell | 9.79e-09 | 18 |
alpha-beta T cell | 9.79e-09 | 18 |
immature T cell | 9.79e-09 | 18 |
mature T cell | 9.79e-09 | 18 |
immature alpha-beta T cell | 9.79e-09 | 18 |
leukocyte | 1.21e-08 | 136 |
macrophage dendritic cell progenitor | 8.36e-08 | 61 |
granulocyte monocyte progenitor cell | 2.89e-07 | 67 |
monopoietic cell | 4.69e-07 | 59 |
monocyte | 4.69e-07 | 59 |
monoblast | 4.69e-07 | 59 |
promonocyte | 4.69e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.54e-10 | 108 |
hematopoietic system | 4.03e-10 | 98 |
blood island | 4.03e-10 | 98 |
immune system | 9.57e-07 | 93 |