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FFCP PHASE1:Mm9::chr14:55735398..55735422,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=319984
|EntrezGene=319984
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000133954_5end
|association_with_transcript=0bp_to_ENSMUST00000133954_5end
|cluster_id=chr14:55735398..55735422,-
|description=CAGE_peak_3_at_Jph4_5end
|description=CAGE_peak_3_at_Jph4_5end
|id=chr14:55735398..55735422,-
|id=chr14:55735398..55735422,-
|ontology_enrichment_celltype=CL:0000117!3.36e-14!23;CL:0000337!3.36e-14!23;CL:0000540!1.92e-13!33;CL:0000047!1.92e-13!33;CL:0000031!1.92e-13!33;CL:0000404!1.92e-13!33;CL:0000393!4.72e-09!39;CL:0000211!4.72e-09!39;CL:0000221!2.55e-08!44;CL:0000133!2.55e-08!44;CL:0002319!2.65e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.07e-18,23;CL:0000337,1.07e-18,23;CL:0000540,5.85e-15,33;CL:0000047,5.85e-15,33;CL:0000031,5.85e-15,33;CL:0000404,5.85e-15,33;CL:0000393,3.81e-11,39;CL:0000211,3.81e-11,39;CL:0002319,3.01e-09,43;CL:0000221,7.79e-09,44;CL:0000133,7.79e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.22e-24!71;UBERON:0003075!6.22e-24!71;UBERON:0007284!6.22e-24!71;UBERON:0001017!8.07e-23!73;UBERON:0005743!8.07e-23!73;UBERON:0000073!1.40e-22!75;UBERON:0001016!1.40e-22!75;UBERON:0004121!9.44e-22!102;UBERON:0000924!9.44e-22!102;UBERON:0006601!9.44e-22!102;UBERON:0001049!6.26e-21!52;UBERON:0005068!6.26e-21!52;UBERON:0006241!6.26e-21!52;UBERON:0007135!6.26e-21!52;UBERON:0000033!1.56e-20!63;UBERON:0002020!1.70e-19!34;UBERON:0000955!2.49e-19!50;UBERON:0006238!2.49e-19!50;UBERON:0002616!9.68e-19!49;UBERON:0003056!3.05e-18!49;UBERON:0003080!1.25e-16!40;UBERON:0002791!2.13e-16!29;UBERON:0003528!2.13e-16!29;UBERON:0001893!2.13e-16!29;UBERON:0002780!4.16e-16!39;UBERON:0001890!4.16e-16!39;UBERON:0006240!4.16e-16!39;UBERON:0000956!1.73e-11!21;UBERON:0001869!1.73e-11!21;UBERON:0000203!1.73e-11!21;UBERON:0002619!4.34e-09!17;UBERON:0007811!1.49e-08!86;UBERON:0000153!2.39e-08!94;UBERON:0002021!2.55e-08!10;UBERON:0000411!2.55e-08!10;UBERON:0001950!2.55e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.05e-28,54;UBERON:0002346,2.35e-28,64;UBERON:0003075,2.35e-28,64;UBERON:0007284,2.35e-28,64;UBERON:0001017,1.04e-27,73;UBERON:0001049,2.15e-27,52;UBERON:0005068,2.15e-27,52;UBERON:0006241,2.15e-27,52;UBERON:0007135,2.15e-27,52;UBERON:0002020,9.94e-27,34;UBERON:0001016,2.08e-26,75;UBERON:0010371,2.66e-23,73;UBERON:0000955,3.18e-23,47;UBERON:0006238,3.18e-23,47;UBERON:0003528,1.68e-22,29;UBERON:0002791,1.68e-22,29;UBERON:0001893,1.68e-22,29;UBERON:0002616,1.93e-22,46;UBERON:0004121,1.72e-21,95;UBERON:0000924,1.72e-21,95;UBERON:0006601,1.72e-21,95;UBERON:0003080,7.25e-21,40;UBERON:0003056,1.01e-20,49;UBERON:0002780,3.66e-20,39;UBERON:0001890,3.66e-20,39;UBERON:0006240,3.66e-20,39;UBERON:0010314,3.51e-18,92;UBERON:0000956,8.43e-16,21;UBERON:0001869,8.43e-16,21;UBERON:0000203,8.43e-16,21;UBERON:0002619,1.59e-12,17;UBERON:0002021,9.97e-11,10;UBERON:0000411,9.97e-11,10;UBERON:0001950,9.97e-11,10;UBERON:0002420,7.58e-08,8;UBERON:0007245,7.58e-08,8;UBERON:0010009,7.58e-08,8;UBERON:0010011,7.58e-08,8;UBERON:0000454,7.58e-08,8;UBERON:0003076,5.21e-07,12;UBERON:0003057,5.21e-07,12
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4339625468194,30.6814767977779,24.719424736741,0.338844532069132,0,0,0,0,0,0.384218305321555,19.7010263386108,26.4611639130114,15.3537221786509,15.7108041422092,20.0990372265968,17.3936934885235,22.6195311603038,26.6573448116906,2.20231761998777,27.5804650264005,17.8183578577242,21.761237475482,31.4717493992289,26.045668527838,12.5632349550621,12.9435400307286,14.9742282821274,26.2219441071564,32.7454865837937,18.0807462450542,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.91347103775248,0,0.445326417194474,1.73485326766136,4.56698217468212,1.15307748628029,1.05505848386836,2.82212897125692,0,0,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,33.9625724533395,34.3492599174066,0,0,0,0,13.6309481858389,39.8025524452205,45.7381841690826,45.7157962105687,35.5444485689159,20.5710164113964,29.2034273521964,0.407357455401265,0,0,0.420883711772948,0.520481771850815,0.919608417733892,1.98068342785884,3.16480117455002,2.85753296435577,4.09963904911519,4.2165776051878,2.06962696591213,0,0.189106080167819,1.23165786914764,1.31517439456545,0.278047249225598,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,56.7782861123144,35.1933774337153,0,0,0.853153002140936,0.928946687441754,2.44848176511977,1.00841762311671,1.55664630691409,0.570676878337677,0,0.494096864172033,0.251335208800269,0.596869416123452,0.38992817423824,0,0.216138049874694,0,0.569003702859245,0.685491075658373,0,0.203651327845314,0.387904974335251,0,0.0632365371242573,0,0,0,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.488894929326078,0,0.234690248288502,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,10.1146871692309,11.2523219128515,0,0.252470927204373,1.89304931649754,1.95219372148319,1.50796378412959,0.238968797952552,0.891194696329576,0.849229592366497,0,1.75353514746787,0.395287777946524,18.315315036043,1.13552068166615,1.78065603667255,0.651547837414304,4.12425307431339,0,0.485561272309963,0,0.565815239267694,0,0.614870295887855,0.516856586336442,0,0.356497378384721,0,0,0,0,0.720244376125241,0.646793418913773,0,0.354680467284547,2.85390108163313,2.46823530903181,2.74018454203139,0,0.21183207086382,1.10264199027481,0.16488625294148,0.161464426695906,0.120625849856312,0,0.164140899745061,0.291480836629851,14.8340241608408,0,0.206386867963223,0,0,0,0,0,0,0,0,0.949007980743406,1.01659733563424,1.08005340821801,0.627264888043406,0.87345025498471,0.809186078308924,0.41326727862668,0.523511883968059,0,0.621339313086926,0.56369293868419,0.598066184175915,0.165458490457098,0,0.129159823477731,0.168956125490778,0.352071715937262,0.39061315453185,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0,0,0,0,0,0.19318959403219,0.187682475451182,1.09890974560359,0.643105137237198,0.501572104035363,50.827665835536,61.2232564554545,59.0082378842579,73.2094556784109,21.2375581128899,27.9495742034189,37.8012600129811,29.7211994127986,23.5634052671786,27.9590568345983,0.415149390336707,1.59609949360412,4.43907374960749,6.07766792670735,6.28839487883947,8.45680138870065,5.778414922842,7.0051919461224,4.81378814387723,6.57012750585873,6.08350319736575,7.35642731405697,6.27398100048212,6.21043978327232,6.43277252302869,4.28664322154766,5.44656331940821,4.05109362973781,5.76920261124629,5.5935589651071,6.17164654293748,5.50174999093946,5.00715998889374,5.66851024866081,4.79957840118186,4.14611578669215,3.65855945745545,5.26139422875686,4.6173398707593,7.2948495315506,4.62676570684279,4.82671963640261,5.72923460437565,7.59190521811233,5.01557188550968,14.7388240983388,3.74290573512653,4.94203424311086,2.48674831689496,0.220591419119515,0.231867835620421
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4339625468194,30.6814767977779,24.719424736741,0.338844532069132,0,0,0,0,0,0.384218305321555,19.7010263386108,26.4611639130114,15.3537221786509,15.7108041422092,20.0990372265968,17.3936934885235,22.6195311603038,26.6573448116906,2.20231761998777,27.5804650264005,17.8183578577242,21.761237475482,31.4717493992289,26.045668527838,12.5632349550621,12.9435400307286,14.9742282821274,26.2219441071564,32.7454865837937,18.0807462450542,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.91347103775248,0,0.445326417194474,1.73485326766136,4.56698217468212,1.15307748628029,1.05505848386836,2.82212897125692,0,0,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,33.9625724533395,34.3492599174066,0,0,0,0,13.6309481858389,39.8025524452205,45.7381841690826,45.7157962105687,35.5444485689159,20.5710164113964,29.2034273521964,0.407357455401265,0,0,0.420883711772948,0.520481771850815,0.919608417733892,1.98068342785884,3.16480117455002,2.85753296435577,4.09963904911519,4.2165776051878,2.06962696591213,0,0.189106080167819,1.23165786914764,1.31517439456545,0.278047249225598,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,56.7782861123144,35.1933774337153,0,0,0.853153002140936,0.928946687441754,2.44848176511977,1.00841762311671,1.55664630691409,0.570676878337677,0,0.494096864172033,0.251335208800269,0.596869416123452,0.38992817423824,0,0.216138049874694,0,0.569003702859245,0.685491075658373,0,0.203651327845314,0.387904974335251,0,0.0632365371242573,0,0,0,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.488894929326078,0,0.234690248288502,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,10.1146871692309,11.2523219128515,0,0.252470927204373,1.89304931649754,1.95219372148319,1.50796378412959,0.238968797952552,0.891194696329576,0.849229592366497,0,1.75353514746787,0.395287777946524,18.315315036043,1.13552068166615,1.78065603667255,0.651547837414304,4.12425307431339,0,0.485561272309963,0,0.565815239267694,0,0.614870295887855,0.516856586336442,0,0.356497378384721,0,0,0,0,0.720244376125241,0.646793418913773,0,0.354680467284547,2.85390108163313,2.46823530903181,2.74018454203139,0,0.21183207086382,1.10264199027481,0.16488625294148,0.161464426695906,0.120625849856312,0,0.164140899745061,0.291480836629851,14.8340241608408,0,0.206386867963223,0,0,0,0,0,0,0,0,0.949007980743406,1.01659733563424,1.08005340821801,0.627264888043406,0.87345025498471,0.809186078308924,0.41326727862668,0.523511883968059,0,0.621339313086926,0.56369293868419,0.598066184175915,0.165458490457098,0,0.129159823477731,0.168956125490778,0.352071715937262,0.39061315453185,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0,0,0,0,0,0.19318959403219,0.187682475451182,1.09890974560359,0.643105137237198,0.501572104035363,50.827665835536,61.2232564554545,59.0082378842579,73.2094556784109,21.2375581128899,27.9495742034189,37.8012600129811,29.7211994127986,23.5634052671786,27.9590568345983,0.415149390336707,1.59609949360412,4.43907374960749,6.07766792670735,6.28839487883947,8.45680138870065,5.778414922842,7.0051919461224,4.81378814387723,6.57012750585873,6.08350319736575,7.35642731405697,6.27398100048212,6.21043978327232,6.43277252302869,4.28664322154766,5.44656331940821,4.05109362973781,5.76920261124629,5.5935589651071,6.17164654293748,5.50174999093946,5.00715998889374,5.66851024866081,4.79957840118186,4.14611578669215,3.65855945745545,5.26139422875686,4.6173398707593,7.2948495315506,4.62676570684279,4.82671963640261,5.72923460437565,7.59190521811233,5.01557188550968,14.7388240983388,3.74290573512653,4.94203424311086,2.48674831689496,0.220591419119515,0.231867835620421
|short_description=p3@Jph4
|short_description=p3@Jph4
}}
}}

Latest revision as of 03:27, 26 September 2015

Short description:p3@Jph4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Jph4_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000133954_5end
EntrezGene:Jph4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Jph4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C320.43
Mouse Granule cells, donor2.CNhs12357.11731-123E330.68
Mouse Granule cells, donor3.CNhs12108.11636-122C724.72
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F526.46
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.35
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F222.62
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D626.66
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F327.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D421.76
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F431.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D826.05
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D626.22
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F632.75
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.08
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B233.96
cerebellum, neonate N30.CNhs11135.1395-42I234.35
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A413.63
corpus striatum, adult.CNhs10487.19-21D839.80
corpus striatum, neonate N00.CNhs11226.630-43F145.74
cortex, adult.CNhs10473.12-14D545.72
cortex, neonate N30.CNhs11107.1392-42F235.54
diencephalon, adult.CNhs10482.20-12F220.57
diencephalon, neonate N30.CNhs11201.1388-42B229.20
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C62.86
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G84.22
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E856.78
hippocampus, neonate N00.CNhs11228.627-43G135.19
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C210.11
medulla oblongata, neonate N30.CNhs11200.1396-42A311.25
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I918.32
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G64.12
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C914.83
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A150.83
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A261.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A359.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D773.21
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.24
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A527.95
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A637.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A729.72
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A823.56
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A927.96
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H24.44
whole body, embryo E14.5.CNhs10578.420-27D26.08
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F28.46
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.27
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.43
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.83
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.59
whole body, embryo E17.5.CNhs10513.490-9F95.02
whole body, embryo E17.CNhs10517.475-3I514.74
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.07e-1823
neuroblast (sensu Vertebrata)1.07e-1823
neuron5.85e-1533
neuronal stem cell5.85e-1533
neuroblast5.85e-1533
electrically signaling cell5.85e-1533
electrically responsive cell3.81e-1139
electrically active cell3.81e-1139
neural cell3.01e-0943
ectodermal cell7.79e-0944
neurectodermal cell7.79e-0944

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.05e-2854
neurectoderm2.35e-2864
neural plate2.35e-2864
presumptive neural plate2.35e-2864
central nervous system1.04e-2773
neural tube2.15e-2752
neural rod2.15e-2752
future spinal cord2.15e-2752
neural keel2.15e-2752
gray matter9.94e-2734
nervous system2.08e-2675
ecto-epithelium2.66e-2373
brain3.18e-2347
future brain3.18e-2347
brain grey matter1.68e-2229
regional part of telencephalon1.68e-2229
telencephalon1.68e-2229
regional part of brain1.93e-2246
ectoderm-derived structure1.72e-2195
ectoderm1.72e-2195
presumptive ectoderm1.72e-2195
anterior neural tube7.25e-2140
pre-chordal neural plate1.01e-2049
regional part of forebrain3.66e-2039
forebrain3.66e-2039
future forebrain3.66e-2039
structure with developmental contribution from neural crest3.51e-1892
cerebral cortex8.43e-1621
cerebral hemisphere8.43e-1621
pallium8.43e-1621
regional part of cerebral cortex1.59e-1217
occipital lobe9.97e-1110
visual cortex9.97e-1110
neocortex9.97e-1110
basal ganglion7.58e-088
nuclear complex of neuraxis7.58e-088
aggregate regional part of brain7.58e-088
collection of basal ganglia7.58e-088
cerebral subcortex7.58e-088
posterior neural tube5.21e-0712
chordal neural plate5.21e-0712
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