FFCP PHASE1:Hg19::chr10:22994352..22994355,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:22994352..22994355,- | |||
|coexpression_cluster_id=C1307 | |||
|description=CAGE_peak_at_chr10:22994352..22994355,- | |description=CAGE_peak_at_chr10:22994352..22994355,- | ||
|id=chr10:22994352..22994355,- | |id=chr10:22994352..22994355,- | ||
|ontology_enrichment_celltype=CL:0000037!3.18e-28!172;CL:0000566!3.18e-28!172;CL:0002032!2.00e-26!165;CL:0000837!2.00e-26!165;CL:0000988!6.13e-25!182;CL:0000738!5.15e-21!140;CL:0002031!3.39e-18!124;CL:0002087!1.68e-17!119;CL:0000763!6.88e-15!112;CL:0000049!6.88e-15!112;CL:0000838!1.22e-11!52;CL:0000542!2.52e-11!53;CL:0000051!2.52e-11!53;CL:0000766!1.86e-08!76;CL:0002057!3.18e-08!42;CL:0000791!3.96e-08!18;CL:0000789!3.96e-08!18;CL:0002420!3.96e-08!18;CL:0002419!3.96e-08!18;CL:0000790!3.96e-08!18;CL:0000084!4.00e-08!25;CL:0000827!4.00e-08!25;CL:0000839!1.52e-07!70;CL:0000860!7.23e-07!45 | |ontology_enrichment_celltype=CL:0000037!3.18e-28!172;CL:0000566!3.18e-28!172;CL:0002032!2.00e-26!165;CL:0000837!2.00e-26!165;CL:0000988!6.13e-25!182;CL:0000738!5.15e-21!140;CL:0002031!3.39e-18!124;CL:0002087!1.68e-17!119;CL:0000763!6.88e-15!112;CL:0000049!6.88e-15!112;CL:0000838!1.22e-11!52;CL:0000542!2.52e-11!53;CL:0000051!2.52e-11!53;CL:0000766!1.86e-08!76;CL:0002057!3.18e-08!42;CL:0000791!3.96e-08!18;CL:0000789!3.96e-08!18;CL:0002420!3.96e-08!18;CL:0002419!3.96e-08!18;CL:0000790!3.96e-08!18;CL:0000084!4.00e-08!25;CL:0000827!4.00e-08!25;CL:0000839!1.52e-07!70;CL:0000860!7.23e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.93e-09;18!CL:0000789;7.93e-09;18!CL:0002419;7.93e-09;18!CL:0000084;2.57e-08;25!CL:0000542;5.06e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.23e-30,168;CL:0002032,1.21e-28,161;CL:0000837,1.21e-28,161;CL:0000988,1.35e-26,177;CL:0000738,3.68e-22,136;CL:0002031,9.46e-20,120;CL:0002087,1.60e-18,115;CL:0000763,2.45e-16,108;CL:0000049,2.45e-16,108;CL:0000838,1.86e-12,52;CL:0000542,6.85e-12,53;CL:0000051,6.85e-12,53;CL:0000791,3.35e-09,18;CL:0000789,3.35e-09,18;CL:0002420,3.35e-09,18;CL:0002419,3.35e-09,18;CL:0000790,3.35e-09,18;CL:0000766,6.20e-09,72;CL:0000084,1.47e-08,25;CL:0000827,1.47e-08,25;CL:0000839,3.88e-08,66;CL:0000860,1.03e-07,42;CL:0002057,1.03e-07,42;CL:0000557,2.50e-07,67;CL:0002009,9.69e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000790;7.93e-09;18!CL:0000051;5.06e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!2.78e-08!51;DOID:0060083!2.78e-08!51;DOID:1240!6.53e-08!39;DOID:8692!1.43e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.16e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.07e-08,51;DOID:0060083,2.07e-08,51;DOID:8692,2.75e-08,31;DOID:1240,4.09e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-27!115;UBERON:0001049!5.07e-21!57;UBERON:0005068!5.07e-21!57;UBERON:0006241!5.07e-21!57;UBERON:0007135!5.07e-21!57;UBERON:0002780!9.72e-19!41;UBERON:0001890!9.72e-19!41;UBERON:0006240!9.72e-19!41;UBERON:0002616!1.40e-17!59;UBERON:0003080!1.48e-17!42;UBERON:0002020!1.96e-17!34;UBERON:0003528!1.96e-17!34;UBERON:0001893!2.81e-17!34;UBERON:0002791!9.08e-17!33;UBERON:0000955!1.84e-16!69;UBERON:0006238!1.84e-16!69;UBERON:0001869!5.94e-16!32;UBERON:0001017!1.01e-15!82;UBERON:0005743!1.45e-14!86;UBERON:0000073!3.96e-13!94;UBERON:0001016!3.96e-13!94;UBERON:0002619!3.22e-12!22;UBERON:0000956!5.31e-12!25;UBERON:0000203!5.31e-12!25;UBERON:0003075!5.09e-11!86;UBERON:0007284!5.09e-11!86;UBERON:0001950!5.47e-11!20;UBERON:0002390!6.13e-11!102;UBERON:0003061!6.13e-11!102;UBERON:0002346!8.58e-11!90;UBERON:0002193!1.21e-10!112;UBERON:0003056!1.94e-08!61;UBERON:0002308!4.65e-07!9;UBERON:0000125!4.65e-07!9;UBERON:0002420!6.87e-07!9;UBERON:0007245!6.87e-07!9;UBERON:0010009!6.87e-07!9;UBERON:0010011!6.87e-07!9;UBERON:0000454!6.87e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.08e-16;34!UBERON:0002020;1.08e-16;34!UBERON:0001893;1.74e-16;34!UBERON:0002791;2.20e-16;32!UBERON:0001869;2.91e-16;32!UBERON:0002780;7.49e-16;41!UBERON:0001890;7.49e-16;41!UBERON:0002619;8.31e-14;22!UBERON:0000073;1.83e-13;53!UBERON:0002616;1.83e-13;53!UBERON:0000956;2.79e-13;25!UBERON:0000203;2.79e-13;25!UBERON:0001950;2.31e-12;20!UBERON:0007023;5.64e-09;114!UBERON:0000955;5.37e-08;68!UBERON:0000125;5.96e-08;9!UBERON:0002308;5.96e-08;9!UBERON:0002420;9.47e-08;9!UBERON:0007245;9.47e-08;9!UBERON:0010009;9.47e-08;9!UBERON:0010011;9.47e-08;9!UBERON:0000454;9.47e-08;9!UBERON:0001017;1.13e-07;75 | |||
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| ||
|short_description=p@chr10:22994352..22994355,- | |short_description=p@chr10:22994352..22994355,- | ||
}} | }} |
Latest revision as of 12:38, 23 July 2015
Short description: | p@chr10:22994352..22994355, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:22994352..22994355, - |
Coexpression cluster: | C1307_thalamus_globus_substantia_optic_spinal_locus_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.23e-30 | 168 |
hematopoietic oligopotent progenitor cell | 1.21e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-28 | 161 |
hematopoietic cell | 1.35e-26 | 177 |
leukocyte | 3.68e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 9.46e-20 | 120 |
nongranular leukocyte | 1.60e-18 | 115 |
myeloid cell | 2.45e-16 | 108 |
common myeloid progenitor | 2.45e-16 | 108 |
lymphoid lineage restricted progenitor cell | 1.86e-12 | 52 |
lymphocyte | 6.85e-12 | 53 |
common lymphoid progenitor | 6.85e-12 | 53 |
mature alpha-beta T cell | 3.35e-09 | 18 |
alpha-beta T cell | 3.35e-09 | 18 |
immature T cell | 3.35e-09 | 18 |
mature T cell | 3.35e-09 | 18 |
immature alpha-beta T cell | 3.35e-09 | 18 |
myeloid leukocyte | 6.20e-09 | 72 |
T cell | 1.47e-08 | 25 |
pro-T cell | 1.47e-08 | 25 |
myeloid lineage restricted progenitor cell | 3.88e-08 | 66 |
classical monocyte | 1.03e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.03e-07 | 42 |
granulocyte monocyte progenitor cell | 2.50e-07 | 67 |
macrophage dendritic cell progenitor | 9.69e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.07e-08 | 51 |
immune system cancer | 2.07e-08 | 51 |
myeloid leukemia | 2.75e-08 | 31 |
leukemia | 4.09e-08 | 39 |