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FFCP PHASE1:Mm9::chr11:100599428..100599454,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19345
|EntrezGene=19345
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=P35278,Q3TJ39,Q8C458
|UniProt=P35278,Q3TJ39,Q8C458
|association_with_transcript=0bp_to_NM_024456,uc007lme.1,uc011yff.1_5end
|association_with_transcript=0bp_to_NM_024456,uc007lme.1,uc011yff.1_5end
|cluster_id=chr11:100599428..100599454,-
|description=CAGE_peak_2_at_Rab5c_5end
|description=CAGE_peak_2_at_Rab5c_5end
|id=chr11:100599428..100599454,-
|id=chr11:100599428..100599454,-
|ontology_enrichment_celltype=CL:0000055!4.06e-09!50;CL:0000221!8.09e-08!44;CL:0000133!8.09e-08!44;CL:0002319!8.83e-08!43
|ontology_enrichment_celltype=CL:0000055!4.06e-09!50;CL:0000221!8.09e-08!44;CL:0000133!8.09e-08!44;CL:0002319!8.83e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000221,8.09e-08,44;CL:0000133,8.09e-08,44;CL:0002319,8.83e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.27e-12!73;UBERON:0005743!1.27e-12!73;UBERON:0000073!1.54e-12!75;UBERON:0001016!1.54e-12!75;UBERON:0001049!1.18e-10!52;UBERON:0005068!1.18e-10!52;UBERON:0006241!1.18e-10!52;UBERON:0007135!1.18e-10!52;UBERON:0000955!3.46e-09!50;UBERON:0006238!3.46e-09!50;UBERON:0002616!6.22e-09!49;UBERON:0002346!8.84e-09!71;UBERON:0003075!8.84e-09!71;UBERON:0007284!8.84e-09!71;UBERON:0002020!4.00e-08!34;UBERON:0004121!4.78e-08!102;UBERON:0000924!4.78e-08!102;UBERON:0006601!4.78e-08!102;UBERON:0003080!2.83e-07!40;UBERON:0002780!7.01e-07!39;UBERON:0001890!7.01e-07!39;UBERON:0006240!7.01e-07!39;UBERON:0000033!9.13e-07!63
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.27e-12,73;UBERON:0001016,1.54e-12,75;UBERON:0000073,3.57e-11,54;UBERON:0001049,1.18e-10,52;UBERON:0005068,1.18e-10,52;UBERON:0006241,1.18e-10,52;UBERON:0007135,1.18e-10,52;UBERON:0002346,4.19e-09,64;UBERON:0003075,4.19e-09,64;UBERON:0007284,4.19e-09,64;UBERON:0000955,1.12e-08,47;UBERON:0006238,1.12e-08,47;UBERON:0002616,2.01e-08,46;UBERON:0004121,3.98e-08,95;UBERON:0000924,3.98e-08,95;UBERON:0006601,3.98e-08,95;UBERON:0002020,4.00e-08,34;UBERON:0003080,2.83e-07,40;UBERON:0002780,7.01e-07,39;UBERON:0001890,7.01e-07,39;UBERON:0006240,7.01e-07,39
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5.64538399239065,6.98760203987768,5.66430254816247,8.43065248398426,7.85267825952089,5.4438288782553,2.4853572523477,3.94585057078933,5.98066184175915,6.783798108741,6.80579159204167,6.84547064431975,8.78571852552046,6.10257640957921,10.54655517236,7.54987279865118,6.28118714147616,3.74439008135225,6.95224465381992,10.1362607645082,8.83314231617514,8.96453678546786,7.16106782669926,9.33802367471945,6.73094517311826,8.27061352177632,7.87538309595551,8.91619637863498,9.78013995827353,8.77120926657772,5.09922760693746,7.12949103307571,4.53460767230423,3.99574716073316,2.51198798506532,2.85403847818933,5.21611903886914,6.94425159169373,5.31139710375069,3.21552568618599,1.00314420807073,14.6835479080437,12.4287813856938,11.4579102687879,7.90524638780963,3.42541259885321,8.3093328712867,10.1253375034771,9.00642406448441,7.25027854374727,11.9084871702919,6.74617759297148,4.78829848081237,8.02447947044431,8.0225216632537,9.64220548088719,6.43452279575049,5.33392146723877,7.2112270033613,6.73930340142812,5.81203587056734,4.56262739802432,5.84741658296836,4.68207537349412,6.14641463086745,6.37533705407307,5.71552429539688,5.91010062318763,7.7163688185482,4.12085900803307,4.85756436443511,5.14303878578123,5.32427418478012,5.48403236878838,4.21504608233753,6.49354724865781,5.753793336634,5.48783918618318,5.78753365163254,7.33342214767654,7.85599180320834,7.11810108745045,5.91026894253381,4.50154147486658,6.04253680625267,6.36591816237767,9.74261253957989,7.01794825336225,8.37997110788363,7.26895661861605,8.82365676478062,8.11537424671475
|phase1_expression=6.40595388419176,9.77131141390211,9.09998478779072,3.0246421130683,4.00716583957078,3.18970616632591,3.27057696833736,5.03580961422147,15.9091256031383,20.1295492636914,4.62288514208863,4.46724090373884,2.9104124088305,4.89554253546385,2.99798785634096,3.84703008040669,6.29605690315332,4.57420139769445,3.97631857456642,3.39511721438424,9.09963204616447,7.34753038886551,5.22399578277871,4.47978783821539,3.67054849707472,10.9104073181854,8.18447792702242,6.89507944594845,7.22088993934221,7.05684363327806,5.32153225572731,5.71527606113668,1.84519436275371,15.8481681015439,3.75507105676657,2.99222361645286,2.45003227514843,15.0671387065287,12.5013655123808,11.5175223674236,12.3528612486513,12.9778642142105,11.6522484727477,8.68688044031483,8.71841608487825,11.7469921383476,43.8139152834902,17.6600376668162,20.4308149943059,13.9989527333484,8.81914456239784,11.5002051491977,4.86569557567435,6.5282592781021,8.4023449785616,7.20326420900652,7.73640287834643,15.4701627683233,16.1853168687678,14.2827564403449,10.1413024560989,18.9752937958714,11.5608323494448,42.7452365708665,45.4878526780808,42.628806896766,35.0532129306534,56.095872576947,7.56934169851887,8.10035629990144,7.36137364729837,14.568200204594,15.2399293256613,8.45186514583183,8.24271050756833,6.43453150627015,7.70811166995721,10.214987046815,9.98442466165583,12.1335384711778,16.5592634920361,15.6274011167028,12.0048689570594,7.87867654044352,8.09830713217094,13.8475435172624,14.0947963991112,13.7935589910722,6.81535739998656,8.16172849153284,17.971598299504,13.7667820317022,2.719885334831,2.15881276655127,3.24888208723835,1.34408066129201,5.33688796500657,6.30592193538814,6.75443611967459,5.65343319216544,8.02807492727079,1.28326477414318,2.54805239706646,0,2.16491041011214,2.78695852022608,2.02209778005913,7.30776830201984,6.47344709117929,8.01587550950054,6.07198643681475,6.69824052286711,8.99400439298628,7.83757730873637,7.17291113527799,7.03732911446183,9.64060374164058,6.65157041831594,8.84610551949874,6.79420769779119,6.62524555381181,3.39412677194655,7.45567044872489,5.85561594023094,6.91174132484402,9.45191104271788,5.27186547826049,5.39912457894067,7.49714339731082,13.6309481858389,13.2675174817402,10.0523481690292,11.6462294528825,14.8314965251592,10.389402227978,8.27430441645564,8.24898847187562,5.97153458928446,3.53811861807145,4.8401626853889,7.80722657776222,7.12696523743766,5.94205028357652,7.9873553452929,6.93972291343544,7.17436833595159,8.33945348581587,6.20888089773638,6.03590380211958,6.99692496620931,7.2139960907219,6.79506770525482,6.39508673218875,9.4028084960985,7.20237477427802,4.97585667046233,5.61770549850588,5.91900186363845,7.38825098428541,6.62802472113606,5.8631514995274,5.58192390529146,4.97163944728941,3.54175617145327,5.39934895105824,3.95307706075693,5.90201483079162,2.6856028744449,4.27855609775049,7.38753588355929,5.18840381093477,3.50879969820798,4.39100230582101,2.28150911892632,7.99101804543684,10.496270462687,13.5471701023357,6.34681359992506,6.18535926552179,6.50262681209228,6.44337306610467,4.63872106633688,7.11609740303585,13.1255682017666,12.8122846617018,16.4698954724011,20.8608223304224,18.502951899827,18.1316601020782,12.5834717211591,10.1584883441106,9.75792238946399,7.39704813717019,5.1411830674378,7.88954149711563,5.49858585182348,7.5641469995374,12.1334968410251,20.3621649540108,19.1893192373483,17.7408562460754,19.7435462274881,5.33614728756868,5.83957870006329,10.614185736113,5.8464149220062,8.92584534109413,9.16473207059184,8.65727896056827,5.4662266115654,7.7824908852017,7.68771956926628,28.7536413054709,11.9085103253921,9.67316786655138,8.08252409430758,5.56131981917928,8.20153986317724,7.57488079683079,5.11626811780309,6.02970412835496,4.75286240170527,4.22442446919304,5.19269398069629,5.47500374037832,8.97614780145875,10.4039195110086,11.5161638617363,8.77001227616179,6.882259218061,7.25276923836761,6.36455857758651,12.0633027151418,21.7562273527484,2.95058563811422,3.03530420935206,12.36239542906,10.9006868530749,8.6885521049638,5.55436039849621,10.4117712407365,8.58965237452605,4.30846795465598,5.4962823529087,5.34716817797746,6.79383673893198,7.2865926301481,9.05993159525067,6.32460444714438,9.96096080907602,6.10342366395555,11.0400674273698,6.67836533349662,3.29940245945071,1.32745138339963,6.79785781233948,5.74414758233027,5.09233715340925,5.02013217897314,3.68922177532713,8.78656196771952,7.63420831902762,5.34746067577082,3.47640433729398,1.05418608574999,0,4.42571487479924,8.28281032544027,9.18446654857557,9.43082954139006,9.22169214939823,8.91844088010353,8.39200005070817,10.3518082698964,5.86679270159276,5.71946591332314,1.54369878638473,3.79238381765404,9.04200789497071,5.72972786817481,5.252383136138,4.10352249362653,8.45294426226567,7.97328798645192,6.4930934703184,6.60437977482312,9.4449208958553,11.8672127912955,4.78429797023588,6.17701067657611,8.15896463970505,10.636310376598,10.9177979305495,11.4560474161814,9.49007980743406,5.28630614529807,5.29226170026826,5.64538399239065,6.98760203987768,5.66430254816247,8.43065248398426,7.85267825952089,5.4438288782553,2.4853572523477,3.94585057078933,5.98066184175915,6.783798108741,6.80579159204167,6.84547064431975,8.78571852552046,6.10257640957921,10.54655517236,7.54987279865118,6.28118714147616,3.74439008135225,6.95224465381992,10.1362607645082,8.83314231617514,8.96453678546786,7.16106782669926,9.33802367471945,6.73094517311826,8.27061352177632,7.87538309595551,8.91619637863498,9.78013995827353,8.77120926657772,5.09922760693746,7.12949103307571,4.53460767230423,3.99574716073316,2.51198798506532,2.85403847818933,5.21611903886914,6.94425159169373,5.31139710375069,3.21552568618599,1.00314420807073,14.6835479080437,12.4287813856938,11.4579102687879,7.90524638780963,3.42541259885321,8.3093328712867,10.1253375034771,9.00642406448441,7.25027854374727,11.9084871702919,6.74617759297148,4.78829848081237,8.02447947044431,8.0225216632537,9.64220548088719,6.43452279575049,5.33392146723877,7.2112270033613,6.73930340142812,5.81203587056734,4.56262739802432,5.84741658296836,4.68207537349412,6.14641463086745,6.37533705407307,5.71552429539688,5.91010062318763,7.7163688185482,4.12085900803307,4.85756436443511,5.14303878578123,5.32427418478012,5.48403236878838,4.21504608233753,6.49354724865781,5.753793336634,5.48783918618318,5.78753365163254,7.33342214767654,7.85599180320834,7.11810108745045,5.91026894253381,4.50154147486658,6.04253680625267,6.36591816237767,9.74261253957989,7.01794825336225,8.37997110788363,7.26895661861605,8.82365676478062,8.11537424671475
|short_description=p2@Rab5c
|short_description=p2@Rab5c
}}
}}

Latest revision as of 16:42, 26 September 2015

Short description:p2@Rab5c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rab5c_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_024456, uc007lme.1, uc011yff.1_5end
EntrezGene:Rab5c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rab5c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E715.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F220.13
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.47
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.90
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.57
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.98
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.22
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.67
GP2+ M cell, pool1.CNhs13228.11845-124H910.91
GP2+ M cell, pool2.CNhs13231.11846-124I18.18
GP2+ M cell, pool3.CNhs13240.11847-124I26.90
Ileum epithelium, pool1.CNhs13199.10252-104B97.22
Ileum epithelium, pool2.CNhs13232.10253-104C17.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G815.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H112.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H311.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.69
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B743.81
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C217.66
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B820.43
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.40
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.20
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C515.47
Mouse Granule cells, donor1.CNhs12131.11713-123C316.19
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C618.98
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C742.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E745.49
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D242.63
Mouse Microglia, donor1.CNhs12629.11718-123C835.05
Mouse Microglia, donor2.CNhs12634.11736-123E856.10
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.57
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.10
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.24
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.24
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.63
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.85
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.79
Mouse Schwann, donor1.CNhs12507.11728-123D96.82
Mouse Schwann, donor2.CNhs12573.11746-123F98.16
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.97
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F713.77
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.65
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.03
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.31
accessory axillary lymph node, adult.CNhs10475.1063-29H96.47
adrenal gland, adult.CNhs10508.49-24D78.02
adrenal gland, embryo E14.CNhs11038.406-44C56.07
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I18.99
adrenal gland, embryo E18.CNhs11026.1262-18F57.84
adrenal gland, neonate N00.CNhs11191.1311-23C17.17
adrenal gland, neonate N25.CNhs11223.1377-27I37.04
amnion, adult pregnant day17.5.CNhs10488.583-22A89.64
aorta, adult.CNhs10498.46-23H16.65
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F56.79
bone (os femoris), neonate N16.CNhs11225.1525-43A66.63
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I26.91
colon, adult.CNhs10468.36-18H79.45
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.27
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.50
corpora quadrigemina, adult.CNhs10501.16-22A413.63
corpus striatum, adult.CNhs10487.19-21D813.27
corpus striatum, neonate N00.CNhs11226.630-43F110.05
cortex, adult.CNhs10473.12-14D511.65
cortex, neonate N30.CNhs11107.1392-42F214.83
diencephalon, adult.CNhs10482.20-12F210.39
diencephalon, neonate N30.CNhs11201.1388-42B28.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.25
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.97
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G44.84
eyeball, embryo E12.CNhs11016.345-16C67.81
eyeball, embryo E14.CNhs10521.399-16E27.13
eyeball, embryo E15.CNhs10593.426-16C95.94
eyeball, embryo E17.CNhs11023.1261-18D47.99
eyeball, neonate N00.CNhs11207.633-15C66.94
eyeball, neonate N01.CNhs11140.1532-43E77.17
eyeball, neonate N02.CNhs11205.1551-44G88.34
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E26.04
forelimb, embryo E12.CNhs10600.359-14H27.00
forelimb, embryo E13.CNhs10589.384-1E27.21
forelimb, embryo E14.CNhs10577.413-26A86.80
forelimb, embryo E15.CNhs11007.437-20E76.40
forelimb, embryo E17.CNhs10598.1517-43C49.40
forelimb, embryo E18.CNhs11008.1520-43B57.20
gonad, embryo E13.CNhs11044.1564-45I64.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.92
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.39
heart, embryo E11.CNhs10586.331-24E96.63
heart, embryo E12.CNhs11015.353-12F55.86
heart, embryo E13.CNhs11013.376-3I95.58
heart, embryo E14.CNhs10597.403-26D44.97
heart, embryo E15.CNhs11017.431-16C83.54
heart, embryo E16.CNhs11021.457-17C65.40
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G35.90
heart, neonate N00.CNhs11213.639-21E32.69
heart, neonate N03.CNhs11221.1349-25I24.28
heart, neonate N10.CNhs11118.749-24G17.39
heart, neonate N16.CNhs11209.782-15G15.19
heart, neonate N20.CNhs11127.821-26I63.51
heart, neonate N25.CNhs11196.1351-25D34.39
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E87.99
hippocampus, neonate N00.CNhs11228.627-43G110.50
intestinal mucosa, adult.CNhs10506.860-29I313.55
intestine, adult.CNhs10496.178-9A36.35
intestine, embryo E12.CNhs11019.1251-16I56.19
intestine, embryo E13.CNhs11010.381-16D56.50
intestine, embryo E15.CNhs10602.976-16D86.44
intestine, embryo E16.CNhs10585.463-22H44.64
intestine, embryo E17.CNhs10582.482-18D37.12
intestine, embryo E18.CNhs10526.1289-20F713.13
intestine, neonate N00.CNhs11126.644-26D112.81
intestine, neonate N01.CNhs11192.1322-23E916.47
intestine, neonate N06.CNhs11102.688-20B820.86
intestine, neonate N07.CNhs11095.720-20F218.50
intestine, neonate N10.CNhs11098.755-23A518.13
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E310.16
intestine, neonate N30.CNhs11131.1384-42G19.76
kidney, embryo E14.CNhs10606.411-4I97.40
kidney, embryo E15.CNhs10997.434-16F85.14
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I25.50
kidney, embryo E18.CNhs11001.1288-20C77.56
kidney, neonate N00.CNhs11214.646-21G712.13
kidney, neonate N10.CNhs11206.758-6D520.36
kidney, neonate N20.CNhs11113.832-19I119.19
kidney, neonate N25.CNhs11122.1353-25F317.74
kidney, neonate N30.CNhs11203.1385-42H119.74
liver, adult pregnant day01.CNhs10466.508-5B25.34
liver, embryo E12.CNhs10601.355-15F85.84
liver, embryo E13.CNhs10524.378-3H610.61
liver, embryo E14.CNhs10594.409-16E15.85
liver, embryo E15.CNhs10520.433-16D78.93
liver, embryo E16.CNhs10523.462-17F59.16
liver, embryo E17.CNhs10510.481-18A38.66
liver, embryo E18.CNhs10579.499-43G45.47
liver, neonate N00.CNhs11117.641-24F47.78
liver, neonate N03.CNhs11123.1345-25G27.69
liver, neonate N06.CNhs11101.684-20A828.75
liver, neonate N07.CNhs11103.716-20H211.91
liver, neonate N10.CNhs11115.751-24B99.67
liver, neonate N20.CNhs11220.823-25A38.08
liver, neonate N25.CNhs11198.1368-26H15.56
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B17.57
lung, embryo E12.CNhs10522.354-16G25.12
lung, embryo E14.CNhs10604.404-26F86.03
lung, embryo E15.CNhs11020.432-17C54.75
lung, embryo E16.CNhs10998.458-17B64.22
lung, embryo E17.CNhs10605.480-44A65.19
lung, embryo E18.CNhs10583.1287-20I65.48
lung, neonate N00.CNhs11224.640-42C68.98
lung, neonate N06.CNhs11212.683-20E510.40
lung, neonate N07.CNhs11111.715-19A311.52
lung, neonate N10.CNhs11219.750-23E68.77
lung, neonate N20.CNhs11109.822-18A46.88
lung, neonate N25.CNhs11119.1359-25C77.25
lung, neonate N30.CNhs11133.1394-42H26.36
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A121.76
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C212.36
medulla oblongata, neonate N30.CNhs11200.1396-42A310.90
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.69
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.55
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.41
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.59
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.79
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.06
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I99.96
ovary, adult.CNhs10507.91-2I76.10
ovary, embryo E18.CNhs11040.505-44H711.04
ovary, neonate N00.CNhs11217.1299-22I46.68
oviduct, adult pregnant day01.CNhs10500.988-6G63.30
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F46.80
pancreas, embryo E15.CNhs11042.1556-45F25.74
pancreas, embryo E16.CNhs11003.460-26E55.09
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G98.79
pancreas, neonate N01.CNhs11138.1531-43D77.63
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E68.28
pituitary gland, embryo E13.CNhs11009.370-44C79.18
pituitary gland, embryo E14.CNhs11037.398-44A59.43
pituitary gland, embryo E15.CNhs10592.427-16B99.22
pituitary gland, embryo E16.CNhs11036.449-43F68.92
pituitary gland, embryo E17.CNhs11039.1265-44F58.39
pituitary gland, neonate N00.CNhs11190.1308-22E910.35
placenta, adult pregnant day10.CNhs10472.539-13I75.87
placenta, adult pregnant day17.CNhs10464.577-18G35.72
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G49.04
skin, neonate N03.CNhs11215.662-22H35.73
skin, neonate N06.CNhs11097.693-20I55.25
skin, neonate N10.CNhs11108.762-6C44.10
small intestine, neonate N16.CNhs11114.790-21I18.45
spinal cord, adult.CNhs10505.24-13C97.97
spleen, adult.CNhs10465.25-2G26.49
spleen, embryo E16.CNhs11035.461-43C16.60
spleen, embryo E18.CNhs11011.1271-21F29.44
spleen, neonate N10.CNhs11116.752-24D111.87
spleen, neonate N20.CNhs11112.824-19H14.78
spleen, neonate N25.CNhs11099.1354-25G36.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.92
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E39.49
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D45.29
stomach, embryo E17.CNhs11006.1035-18D55.65
stomach, embryo E18.CNhs10999.1286-20C66.99
stomach, neonate N03.CNhs11193.1340-24B85.66
stomach, neonate N07.CNhs11210.718-18A98.43
stomach, neonate N25.CNhs11104.1355-25E47.85
stomach, neonate N30.CNhs11134.1386-42I15.44
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F55.98
testis, embryo E15.CNhs11034.443-27C56.78
testis, embryo E16.CNhs11033.470-26G56.81
testis, embryo E17.CNhs11029.486-18I56.85
testis, embryo E18.CNhs11027.503-18G58.79
testis, neonate N00.CNhs11189.1300-22B76.10
testis, neonate N07.CNhs11222.726-26I410.55
testis, neonate N10.CNhs11204.763-44D97.55
testis, neonate N20.CNhs11110.839-18H36.28
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B56.95
thymus, embryo E14.CNhs11041.402-44I410.14
thymus, embryo E15.CNhs11005.430-45I28.83
thymus, embryo E16.CNhs11002.456-26C58.96
thymus, embryo E17.CNhs10581.478-18C17.16
thymus, embryo E18.CNhs10595.1273-19G49.34
thymus, neonate N02.CNhs11181.1541-43F86.73
thymus, neonate N03.CNhs11137.2104-43C78.27
thymus, neonate N06.CNhs11197.681-26C47.88
thymus, neonate N07.CNhs11211.713-19D38.92
thymus, neonate N10.CNhs11194.748-24E49.78
thymus, neonate N20.CNhs11186.820-7A28.77
thymus, neonate N25.CNhs11125.1362-25G75.10
thymus, neonate N30.CNhs11132.1393-42G27.13
tongue, adult.CNhs10499.32-1B44.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.51
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E45.22
uterus, adult pregnant day19.CNhs10497.590-15F56.94
uterus, adult.CNhs10509.92-27E55.31
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.91
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I86.75
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H28.02
whole body, embryo E14.5.CNhs10578.420-27D28.02
whole body, embryo E14.CNhs10519.395-14B19.64
whole body, embryo E16.CNhs10514.453-14F26.43
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.91
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.91
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.04
whole body, embryo E17.5.CNhs10513.490-9F96.37
whole body, embryo E17.CNhs10517.475-3I59.74
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C28.38
whole body, neonate N01.CNhs10576.659-23C67.27
whole body, neonate N06.CNhs10515.692-21D18.82
whole body, neonate N10.CNhs10518.761-6B48.12





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell8.09e-0844
neurectodermal cell8.09e-0844
neural cell8.83e-0843

Uber anatomy
Ontology termp-valuen
central nervous system1.27e-1273
nervous system1.54e-1275
regional part of nervous system3.57e-1154
neural tube1.18e-1052
neural rod1.18e-1052
future spinal cord1.18e-1052
neural keel1.18e-1052
neurectoderm4.19e-0964
neural plate4.19e-0964
presumptive neural plate4.19e-0964
brain1.12e-0847
future brain1.12e-0847
regional part of brain2.01e-0846
ectoderm-derived structure3.98e-0895
ectoderm3.98e-0895
presumptive ectoderm3.98e-0895
gray matter4.00e-0834
anterior neural tube2.83e-0740
regional part of forebrain7.01e-0739
forebrain7.01e-0739
future forebrain7.01e-0739
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