FFCP PHASE1:Hg19::chr10:17270479..17270504,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7431 | |EntrezGene=7431 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12692 | |HGNC=12692 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000478746_5end | |association_with_transcript=-9bp_to_ENST00000478746_5end | ||
|cluster_id=chr10:17270479..17270504,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_13_at_VIM_5end | |description=CAGE_peak_13_at_VIM_5end | ||
|id=chr10:17270479..17270504,+ | |id=chr10:17270479..17270504,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.97e-19!140;CL:0002031!3.17e-17!124;CL:0002087!1.00e-16!119;CL:0000037!8.48e-16!172;CL:0000566!8.48e-16!172;CL:0000988!1.01e-15!182;CL:0002032!1.37e-13!165;CL:0000837!1.37e-13!165;CL:0002057!9.93e-12!42;CL:0000860!2.85e-11!45;CL:0000557!9.82e-10!71;CL:0000766!2.09e-09!76;CL:0000839!2.95e-09!70;CL:0000542!5.43e-09!53;CL:0000051!5.43e-09!53;CL:0000838!2.13e-08!52;CL:0002009!6.09e-08!65;CL:0002194!9.79e-08!63;CL:0000576!9.79e-08!63;CL:0000040!9.79e-08!63;CL:0000559!9.79e-08!63;CL:0000219!4.02e-07!390 | |ontology_enrichment_celltype=CL:0000738!3.97e-19!140;CL:0002031!3.17e-17!124;CL:0002087!1.00e-16!119;CL:0000037!8.48e-16!172;CL:0000566!8.48e-16!172;CL:0000988!1.01e-15!182;CL:0002032!1.37e-13!165;CL:0000837!1.37e-13!165;CL:0002057!9.93e-12!42;CL:0000860!2.85e-11!45;CL:0000557!9.82e-10!71;CL:0000766!2.09e-09!76;CL:0000839!2.95e-09!70;CL:0000542!5.43e-09!53;CL:0000051!5.43e-09!53;CL:0000838!2.13e-08!52;CL:0002009!6.09e-08!65;CL:0002194!9.79e-08!63;CL:0000576!9.79e-08!63;CL:0000040!9.79e-08!63;CL:0000559!9.79e-08!63;CL:0000219!4.02e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.26e-24;5!CL:0000817;7.12e-15;1!CL:0000163;9.36e-14;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.79e-24,5;CL:0002028,1.79e-24,5;CL:0000163,6.74e-14,9;CL:0000738,7.78e-07,136;CL:0000839,8.98e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.09e-10!102;UBERON:0003061!1.09e-10!102;UBERON:0002193!8.87e-10!112;UBERON:0002371!5.95e-09!80;UBERON:0001474!3.55e-08!86;UBERON:0002405!1.90e-07!115;UBERON:0004765!4.75e-07!101;UBERON:0001434!4.75e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.08e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.08e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.502170558379211,0.229240217243854,0.164201178899891,0.550975469195755,0.393364276848904,0,0.77408061658038,0,0,0,0,0.142169232487422,0.293600439334847,0,0.401088894940283,0.651032612147555,0,0,0,0,0.755751887377619,0.242584061187816,0.232429036905685,0,0.619412741790207,0,0.512321413058201,0.236482229888585,1.37898272294647,0.645484683583826,0,0,0.272906150057846,0.224723484445085,0.612167784741805,0,0.639337125799041,0,0,0,0.580418477257168,0.56738522469114,0.622822248995575,0.251248665256743,0.521482918420201,0,1.21079900526674,0.368277635987565,0.632924774881769,0,0.212604299965044,0,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0.853460445133014,0,0,0,0,0.569212969109448,0.587237189370939,0.764546456250458,0,0,0.526768169550154,0.393419540227666,0,0.822405995998037,0,0,0,0,0,0,0.221533894583621,0.541607727530031,0.128091319725675,0,0.164437904603676,0,0,0,0.267540828089713,0,0.339928028092699,0.383220493601921,0,0.506039384039006,0,0,0,0.150575119077773,0,0,0,0,0,1.06976078313403,0.724122019413995,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,5.56661070865279,0,0,0,0,0,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.302714855289863,0,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0.464775771478074,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,1.4512968087854,1.44119953416961,1.76739406796932,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0.205476322550383,0,0,0,0.431255149719035,0.513372145118994,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0.371606350251437,3.60673032441112,0.569134746787313,0.797131363644112,0,0,0.211673582723883,0,0.280797178113459,0.456469358066384,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0.780103689942349,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0.19606253431774,0,0,0,0,0,0,0.865554558968364,0,0,1.22206028986725,0.296521128680622,0,0.104421949505455,0.067401132980677,0,0,0.729819156862664,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0,0,0.225980740780532,0.137041924646751,0,0,0,0,0,0,0,0.229073192331831,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76205998859206,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0.5013797880454,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0,0.276697269872462,0,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.308801447160972,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.255788742607303,0.107824811396682,0,0.54604819096007,0,0.212574920101683,0.371807292777007,0,0,0.94634094001504,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,1.05522746615772,0,0,0,0,0,0,0.576169937778896,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0.316027223465453,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.356760272332706,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.187967835959707,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0.315543124386369,0,0.436350690340377,0,0.371995018166751,0,0,0.252332849670158,0.437062287854782,1.77377901416012,0,0,0,0,11.2910260345177,23.0449151934314,0,0,0,0.476128862927481,0.452122368852043,0.372448285775147,0.112131862580613,0.12729431655633,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 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| ||
|short_description=p13@VIM | |short_description=p13@VIM | ||
}} | }} |
Latest revision as of 10:19, 17 September 2015
Short description: | p13@VIM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_VIM_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -9bp_to_ENST00000478746_5end |
EntrezGene: | VIM |
HGNC: | 12692 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.79e-24 | 5 |
basophil mast progenitor cell | 1.79e-24 | 5 |
endocrine cell | 6.74e-14 | 9 |
leukocyte | 7.78e-07 | 136 |
myeloid lineage restricted progenitor cell | 8.98e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
testis | 9.08e-08 | 8 |