FFCP PHASE1:Hg19::chr10:17065696..17065705,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:17065696..17065705,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr10:17065696..17065705,+ | |description=CAGE_peak_at_chr10:17065696..17065705,+ | ||
|id=chr10:17065696..17065705,+ | |id=chr10:17065696..17065705,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.75e-22!140;CL:0002057!1.90e-20!42;CL:0000860!1.14e-18!45;CL:0002031!1.91e-18!124;CL:0002087!6.71e-17!119;CL:0000557!3.60e-16!71;CL:0000766!3.61e-16!76;CL:0000037!5.15e-16!172;CL:0000566!5.15e-16!172;CL:0000624!9.38e-15!6;CL:0000988!1.77e-14!182;CL:0002032!3.68e-14!165;CL:0000837!3.68e-14!165;CL:0002009!1.40e-13!65;CL:0000839!1.52e-13!70;CL:0000134!2.53e-13!358;CL:0002320!9.52e-13!365;CL:0002393!5.33e-12!9;CL:0002397!5.33e-12!9;CL:0000219!5.81e-12!390;CL:0002194!2.28e-11!63;CL:0000576!2.28e-11!63;CL:0000040!2.28e-11!63;CL:0000559!2.28e-11!63;CL:0000763!1.51e-10!112;CL:0000049!1.51e-10!112;CL:0000791!8.07e-10!18;CL:0000789!8.07e-10!18;CL:0002420!8.07e-10!18;CL:0002419!8.07e-10!18;CL:0000790!8.07e-10!18;CL:0000623!6.76e-09!3;CL:0000825!6.76e-09!3;CL:0000767!9.58e-09!3;CL:0000034!9.80e-09!444;CL:0000048!2.32e-08!430;CL:0000723!4.99e-08!436;CL:0000842!6.57e-08!3;CL:0000898!7.73e-08!3 | |ontology_enrichment_celltype=CL:0000738!1.75e-22!140;CL:0002057!1.90e-20!42;CL:0000860!1.14e-18!45;CL:0002031!1.91e-18!124;CL:0002087!6.71e-17!119;CL:0000557!3.60e-16!71;CL:0000766!3.61e-16!76;CL:0000037!5.15e-16!172;CL:0000566!5.15e-16!172;CL:0000624!9.38e-15!6;CL:0000988!1.77e-14!182;CL:0002032!3.68e-14!165;CL:0000837!3.68e-14!165;CL:0002009!1.40e-13!65;CL:0000839!1.52e-13!70;CL:0000134!2.53e-13!358;CL:0002320!9.52e-13!365;CL:0002393!5.33e-12!9;CL:0002397!5.33e-12!9;CL:0000219!5.81e-12!390;CL:0002194!2.28e-11!63;CL:0000576!2.28e-11!63;CL:0000040!2.28e-11!63;CL:0000559!2.28e-11!63;CL:0000763!1.51e-10!112;CL:0000049!1.51e-10!112;CL:0000791!8.07e-10!18;CL:0000789!8.07e-10!18;CL:0002420!8.07e-10!18;CL:0002419!8.07e-10!18;CL:0000790!8.07e-10!18;CL:0000623!6.76e-09!3;CL:0000825!6.76e-09!3;CL:0000767!9.58e-09!3;CL:0000034!9.80e-09!444;CL:0000048!2.32e-08!430;CL:0000723!4.99e-08!436;CL:0000842!6.57e-08!3;CL:0000898!7.73e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000623;3.23e-23;3!CL:0000767;7.28e-23;3!CL:0000624;2.09e-19;6!CL:0000791;5.98e-19;18!CL:0000789;5.98e-19;18!CL:0002419;5.98e-19;18!CL:0001014;3.58e-15;2!CL:0001016;3.58e-15;2!CL:0000084;2.02e-13;25!CL:0000097;2.17e-13;5!CL:0002393;3.85e-11;6!CL:0002397;3.85e-11;6!CL:0000094;6.64e-09;8!CL:0000895;2.84e-08;1!CL:0000163;1.17e-07;9!CL:0000542;1.98e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.50e-26,136;CL:0000623,2.69e-23,3;CL:0000825,2.69e-23,3;CL:0000767,7.56e-23,3;CL:0000037,2.47e-20,168;CL:0002031,5.55e-20,120;CL:0002032,2.00e-19,161;CL:0000837,2.00e-19,161;CL:0000624,2.48e-19,6;CL:0000988,4.34e-19,177;CL:0000791,6.95e-19,18;CL:0000789,6.95e-19,18;CL:0002420,6.95e-19,18;CL:0002419,6.95e-19,18;CL:0000790,6.95e-19,18;CL:0001014,2.99e-15,2;CL:0001016,2.99e-15,2;CL:0000097,1.71e-13,5;CL:0002028,1.71e-13,5;CL:0000084,2.25e-13,25;CL:0000827,2.25e-13,25;CL:0002087,8.89e-13,115;CL:0000838,2.21e-12,52;CL:0000542,4.07e-12,53;CL:0000051,4.07e-12,53;CL:0000766,6.38e-10,72;CL:0000094,6.74e-09,8;CL:0000557,9.51e-09,67;CL:0000763,1.18e-08,108;CL:0000049,1.18e-08,108;CL:0000134,2.80e-08,354;CL:0000810,3.53e-08,1;CL:0000895,3.53e-08,1;CL:0002436,3.53e-08,1;CL:0002427,3.53e-08,1;CL:0002428,3.53e-08,1;CL:0002429,3.53e-08,1;CL:0002433,3.53e-08,1;CL:0002431,3.53e-08,1;CL:0002432,3.53e-08,1;CL:0002320,4.97e-08,361;CL:0000163,1.03e-07,9;CL:0002393,1.13e-07,9;CL:0002397,1.13e-07,9;CL:0000034,2.44e-07,441;CL:0000219,3.76e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000790;5.98e-19;18!CL:0002427;2.84e-08;1!CL:0000051;1.98e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.95e-15!80;UBERON:0002390!1.91e-14!102;UBERON:0003061!1.91e-14!102;UBERON:0001474!2.47e-13!86;UBERON:0002193!2.08e-12!112;UBERON:0002384!5.77e-12!375;UBERON:0004765!3.28e-11!101;UBERON:0001434!3.28e-11!101;UBERON:0002405!4.61e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.39e-09,98;UBERON:0003061,1.39e-09,98;UBERON:0002371,3.61e-09,76;UBERON:0002405,1.31e-08,93;UBERON:0002193,1.73e-08,108;UBERON:0001474,2.27e-08,82;UBERON:0002384,1.09e-07,371;UBERON:0004765,1.80e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,4.72037132218685,5.37361157336098,5.41856431606266,0,0,0,0,0,0,1.66198622559563,1.80490002723128,3.90619567288533,0,0,0,0.145398238779565,0,0,0,0,1.23882548358041,0.28769239232215,0,0,0,1.29096936716765,0,0,0,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,0,0,0.426224750532694,0.580418477257168,0,0,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0.628975936525128,0.22465726229299,0.300353785683013,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28685314316103,1.12101712596307,0,5.70458333330116,3.14408610199332,2.2616164889946,0,0.32592226663359,0,0,0.222820913770347,0.589211814949674,0.221533894583621,0.270803863765016,0,0.260118695119756,0.164437904603676,0.276350017785848,0,0.444859689486181,0,0,0,1.14966148080576,0.34362744548263,1.01207876807801,0,0,0,0,0,0,0,0,10.0803371612366,2.13952156626806,4.34473211648397,0,0,0,0,0,0,0.795285947051099,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.506328996723799,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31724984865235,1.8735593944205,2.27236380167484,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2455995305002,7.76259269494262,5.77543663258868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.2942852049117,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,3.86900977278975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,1.25783950876288,0,0.228840068396924,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0.521745061811734,0.300515217994437,0,0,0.363697318405119,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,4.72037132218685,5.37361157336098,5.41856431606266,0,0,0,0,0,0,1.66198622559563,1.80490002723128,3.90619567288533,0,0,0,0.145398238779565,0,0,0,0,1.23882548358041,0.28769239232215,0,0,0,1.29096936716765,0,0,0,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,0,0,0.426224750532694,0.580418477257168,0,0,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0.628975936525128,0.22465726229299,0.300353785683013,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28685314316103,1.12101712596307,0,5.70458333330116,3.14408610199332,2.2616164889946,0,0.32592226663359,0,0,0.222820913770347,0.589211814949674,0.221533894583621,0.270803863765016,0,0.260118695119756,0.164437904603676,0.276350017785848,0,0.444859689486181,0,0,0,1.14966148080576,0.34362744548263,1.01207876807801,0,0,0,0,0,0,0,0,10.0803371612366,2.13952156626806,4.34473211648397,0,0,0,0,0,0,0.795285947051099,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.506328996723799,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31724984865235,1.8735593944205,2.27236380167484,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2455995305002,7.76259269494262,5.77543663258868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.2942852049117,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,3.86900977278975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,1.25783950876288,0,0.228840068396924,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0.521745061811734,0.300515217994437,0,0,0.363697318405119,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:17065696..17065705,+ | |short_description=p@chr10:17065696..17065705,+ | ||
}} | }} |
Latest revision as of 12:10, 23 July 2015
Short description: | p@chr10:17065696..17065705, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17065696..17065705, + |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.39e-09 | 98 |
blood island | 1.39e-09 | 98 |
bone marrow | 3.61e-09 | 76 |
immune system | 1.31e-08 | 93 |
hemolymphoid system | 1.73e-08 | 108 |
bone element | 2.27e-08 | 82 |
connective tissue | 1.09e-07 | 371 |
skeletal element | 1.80e-07 | 90 |