FFCP PHASE1:Hg19::chr10:135139771..135139785,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50632 | |EntrezGene=50632 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17938 | |HGNC=17938 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000467611_5end | |association_with_transcript=32bp_to_ENST00000467611_5end | ||
|cluster_id=chr10:135139771..135139785,- | |||
|coexpression_cluster_id=C2993 | |||
|description=CAGE_peak_2_at_CALY_5end | |description=CAGE_peak_2_at_CALY_5end | ||
|id=chr10:135139771..135139785,- | |id=chr10:135139771..135139785,- | ||
|ontology_enrichment_celltype=CL:0002322!1.12e-07!5 | |ontology_enrichment_celltype=CL:0002322!1.12e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002321;4.17e-13;15!CL:0000333;2.80e-11;5!CL:0002322;2.38e-10;5!CL:0002553;3.26e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.90e-10,5;CL:0000333,2.90e-07,41;CL:0002553,3.57e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.21e-08;3!UBERON:0006238;1.47e-08;10!UBERON:0003056;1.48e-08;3!UBERON:0005425;9.50e-07;1 | |||
|ontology_enrichment_disease=DOID:3095!2.04e-08!22;DOID:2994!2.04e-08!22;DOID:171!5.71e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.56e-14;10!DOID:3095;6.36e-12;22!DOID:2994;6.36e-12;22!DOID:169;1.79e-09;6!DOID:178;9.50e-07;1!DOID:326;9.50e-07;1!DOID:3978;9.50e-07;1!DOID:3394;9.50e-07;1!DOID:5844;9.50e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.60e-14,10;DOID:3095,7.56e-12,22;DOID:2994,7.56e-12,22;DOID:169,1.74e-09,6;DOID:178,7.15e-07,1;DOID:326,7.15e-07,1;DOID:3978,7.15e-07,1;DOID:3394,7.15e-07,1;DOID:5844,7.15e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.21e-27!94;UBERON:0001016!4.21e-27!94;UBERON:0005743!3.40e-25!86;UBERON:0001017!3.61e-23!82;UBERON:0002346!2.97e-22!90;UBERON:0001049!1.09e-21!57;UBERON:0005068!1.09e-21!57;UBERON:0006241!1.09e-21!57;UBERON:0007135!1.09e-21!57;UBERON:0003075!5.21e-20!86;UBERON:0007284!5.21e-20!86;UBERON:0000955!7.71e-20!69;UBERON:0006238!7.71e-20!69;UBERON:0002616!4.85e-19!59;UBERON:0003056!1.46e-14!61;UBERON:0000924!1.22e-13!173;UBERON:0006601!1.22e-13!173;UBERON:0002780!2.82e-13!41;UBERON:0001890!2.82e-13!41;UBERON:0006240!2.82e-13!41;UBERON:0004732!3.31e-13!13;UBERON:0003080!8.52e-13!42;UBERON:0004121!4.27e-12!169;UBERON:0004733!6.78e-12!12;UBERON:0002028!6.78e-12!12;UBERON:0007277!6.78e-12!12;UBERON:0003076!5.49e-11!15;UBERON:0003057!5.49e-11!15;UBERON:0000033!6.87e-11!123;UBERON:0000153!8.01e-10!129;UBERON:0007811!8.01e-10!129;UBERON:0002020!5.28e-09!34;UBERON:0003528!5.28e-09!34;UBERON:0001893!6.09e-09!34;UBERON:0002680!1.14e-08!9;UBERON:0001895!1.14e-08!9;UBERON:0010092!1.14e-08!9;UBERON:0001869!1.16e-08!32;UBERON:0007023!1.56e-08!115;UBERON:0000956!3.30e-08!25;UBERON:0000203!3.30e-08!25;UBERON:0002791!3.31e-08!33;UBERON:0000025!2.60e-07!194;UBERON:0000483!3.94e-07!309;UBERON:0001950!4.49e-07!20;UBERON:0000119!6.82e-07!312;UBERON:0001894!9.35e-07!7;UBERON:0006222!9.35e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;7.66e-12;2!UBERON:0000013;2.80e-11;5!UBERON:0002410;2.80e-11;5!UBERON:0000010;1.62e-10;8!UBERON:0000922;5.42e-07;49!UBERON:0000941;9.50e-07;1!UBERON:0001785;9.50e-07;1!UBERON:0002464;9.50e-07;1!UBERON:0004904;9.50e-07;1!UBERON:0001021;9.50e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.15e-12,2;UBERON:0000013,2.71e-11,5;UBERON:0002410,2.71e-11,5;UBERON:0001016,9.74e-11,89;UBERON:0000010,1.54e-10,8;UBERON:0000941,8.98e-07,1;UBERON:0001785,8.98e-07,1;UBERON:0002464,8.98e-07,1;UBERON:0004904,8.98e-07,1;UBERON:0001021,8.98e-07,1;UBERON:0003902,8.98e-07,1;UBERON:0005425,8.98e-07,1 | |||
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| ||
|short_description=p2@CALY | |short_description=p2@CALY | ||
}} | }} |
Latest revision as of 05:36, 17 September 2015
Short description: | p2@CALY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CALY_5end |
Coexpression cluster: | C2993_Wilms_rhabdomyosarcoma_neuroblastoma_retinoblastoma_brain_cerebellum_teratocarcinoma |
Association with transcript: | 32bp_to_ENST00000467611_5end |
EntrezGene: | CALY |
HGNC: | 17938 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.90e-10 | 5 |
migratory neural crest cell | 2.90e-07 | 41 |
lung fibroblast | 3.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.15e-12 | 2 |
sympathetic nervous system | 2.71e-11 | 5 |
autonomic nervous system | 2.71e-11 | 5 |
nervous system | 9.74e-11 | 89 |
peripheral nervous system | 1.54e-10 | 8 |
cranial nerve II | 8.98e-07 | 1 |
cranial nerve | 8.98e-07 | 1 |
nerve trunk | 8.98e-07 | 1 |
nerve connecting eye with brain | 8.98e-07 | 1 |
nerve | 8.98e-07 | 1 |
retinal neural layer | 8.98e-07 | 1 |
presumptive neural retina | 8.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.60e-14 | 10 |
germ cell and embryonal cancer | 7.56e-12 | 22 |
germ cell cancer | 7.56e-12 | 22 |
neuroendocrine tumor | 1.74e-09 | 6 |
vascular disease | 7.15e-07 | 1 |
ischemia | 7.15e-07 | 1 |
extrinsic cardiomyopathy | 7.15e-07 | 1 |
myocardial ischemia | 7.15e-07 | 1 |
myocardial infarction | 7.15e-07 | 1 |