FFCP PHASE1:Hg19::chr10:134232503..134232535,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-51bp_to_ENST00000428814_5end | |association_with_transcript=-51bp_to_ENST00000428814_5end | ||
|cluster_id=chr10:134232503..134232535,+ | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_1_at_ENST00000428814_5end | |description=CAGE_peak_1_at_ENST00000428814_5end | ||
|id=chr10:134232503..134232535,+ | |id=chr10:134232503..134232535,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.18e-13!45;CL:0000766!1.10e-12!76;CL:0002057!1.87e-12!42;CL:0002393!6.00e-12!9;CL:0002397!6.00e-12!9;CL:0000839!2.65e-11!70;CL:0000557!4.98e-11!71;CL:0002194!2.12e-10!63;CL:0000576!2.12e-10!63;CL:0000040!2.12e-10!63;CL:0000559!2.12e-10!63;CL:0002009!7.39e-10!65;CL:0000738!9.73e-07!140 | |ontology_enrichment_celltype=CL:0000860!1.18e-13!45;CL:0000766!1.10e-12!76;CL:0002057!1.87e-12!42;CL:0002393!6.00e-12!9;CL:0002397!6.00e-12!9;CL:0000839!2.65e-11!70;CL:0000557!4.98e-11!71;CL:0002194!2.12e-10!63;CL:0000576!2.12e-10!63;CL:0000040!2.12e-10!63;CL:0000559!2.12e-10!63;CL:0002009!7.39e-10!65;CL:0000738!9.73e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000875;6.66e-33;3!CL:0002396;6.66e-33;3!CL:0002393;2.16e-16;6!CL:0002397;2.16e-16;6!CL:0000236;7.82e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,4.43e-42,9;CL:0002397,4.43e-42,9;CL:0000875,6.66e-33,3;CL:0002396,6.66e-33,3;CL:0000860,9.59e-09,42;CL:0002057,9.59e-09,42;CL:0000473,1.35e-07,48;CL:0000234,1.35e-07,48;CL:0000236,2.46e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.63e-12;1!UBERON:0007297;8.93e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!5.16e-14!9;UBERON:0002390!2.16e-09!102;UBERON:0003061!2.16e-09!102;UBERON:0002371!6.72e-09!80;UBERON:0001474!1.90e-08!86;UBERON:0002193!2.63e-08!112;UBERON:0001557!6.02e-08!19;UBERON:0004765!7.34e-08!101;UBERON:0001434!7.34e-08!101;UBERON:0000926!2.24e-07!448;UBERON:0004120!2.24e-07!448;UBERON:0006603!2.24e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.57e-15;3!UBERON:0004054;1.57e-15;3!UBERON:0000998;2.63e-12;1!UBERON:0006868;2.63e-12;1!UBERON:0001000;2.93e-12;1!UBERON:0005352;2.93e-12;1!UBERON:0005904;6.98e-12;4!UBERON:0000058;3.21e-10;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.58e-15,3;UBERON:0004054,1.58e-15,3;UBERON:0000998,2.63e-12,1;UBERON:0006868,2.63e-12,1;UBERON:0001000,2.93e-12,1;UBERON:0005352,2.93e-12,1;UBERON:0005904,6.98e-12,4 | |||
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| ||
|short_description=p1@ENST00000428814 | |short_description=p1@ENST00000428814 | ||
}} | }} |
Latest revision as of 11:46, 23 July 2015
Short description: | p1@ENST00000428814 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000428814_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | -51bp_to_ENST00000428814_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 4.43e-42 | 9 |
CD14-positive, CD16-positive monocyte | 4.43e-42 | 9 |
non-classical monocyte | 6.66e-33 | 3 |
CD14-low, CD16-positive monocyte | 6.66e-33 | 3 |
classical monocyte | 9.59e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.59e-09 | 42 |
defensive cell | 1.35e-07 | 48 |
phagocyte | 1.35e-07 | 48 |
B cell | 2.46e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.58e-15 | 3 |
internal male genitalia | 1.58e-15 | 3 |
seminal vesicle | 2.63e-12 | 1 |
seminal fluid secreting gland | 2.63e-12 | 1 |
vas deferens | 2.93e-12 | 1 |
spermatic cord | 2.93e-12 | 1 |
duct of male reproductive system | 6.98e-12 | 4 |