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FFCP PHASE1:Mm9::chr14:124026281..124026376,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=338370
|EntrezGene=338370
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=E9QLE4,E9QQ85,Q8BXR5
|UniProt=E9QLE4,E9QQ85,Q8BXR5
|association_with_transcript=0bp_to_ENSMUST00000000201,ENSMUST00000072254,NM_177393,uc007vbq.1,uc007vbr.1,uc007vbs.1,uc007vbt.1,uc011zqp.1_5end
|association_with_transcript=0bp_to_ENSMUST00000000201,ENSMUST00000072254,NM_177393,uc007vbq.1,uc007vbr.1,uc007vbs.1,uc007vbt.1,uc011zqp.1_5end
|cluster_id=chr14:124026281..124026376,-
|description=CAGE_peak_1_at_Nalcn_5end
|description=CAGE_peak_1_at_Nalcn_5end
|id=chr14:124026281..124026376,-
|id=chr14:124026281..124026376,-
|ontology_enrichment_celltype=CL:0000540!2.13e-14!33;CL:0000047!2.13e-14!33;CL:0000031!2.13e-14!33;CL:0000404!2.13e-14!33;CL:0000221!1.14e-12!44;CL:0000133!1.14e-12!44;CL:0002319!2.94e-12!43;CL:0000393!9.43e-10!39;CL:0000211!9.43e-10!39;CL:0000117!1.69e-09!23;CL:0000337!1.69e-09!23;CL:0000055!3.70e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,5.10e-15,33;CL:0000047,5.10e-15,33;CL:0000031,5.10e-15,33;CL:0000404,5.10e-15,33;CL:0000221,8.69e-13,44;CL:0000133,8.69e-13,44;CL:0002319,2.59e-12,43;CL:0000393,9.24e-11,39;CL:0000211,9.24e-11,39;CL:0000117,2.53e-09,23;CL:0000337,2.53e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.30e-32!73;UBERON:0005743!6.30e-32!73;UBERON:0004121!7.36e-32!102;UBERON:0000924!7.36e-32!102;UBERON:0006601!7.36e-32!102;UBERON:0000073!1.23e-31!75;UBERON:0001016!1.23e-31!75;UBERON:0002346!1.16e-29!71;UBERON:0003075!1.16e-29!71;UBERON:0007284!1.16e-29!71;UBERON:0000033!8.29e-26!63;UBERON:0001049!7.25e-24!52;UBERON:0005068!7.25e-24!52;UBERON:0006241!7.25e-24!52;UBERON:0007135!7.25e-24!52;UBERON:0000955!4.53e-23!50;UBERON:0006238!4.53e-23!50;UBERON:0002616!2.62e-22!49;UBERON:0003056!1.19e-19!49;UBERON:0003080!1.12e-17!40;UBERON:0002780!5.46e-17!39;UBERON:0001890!5.46e-17!39;UBERON:0006240!5.46e-17!39;UBERON:0002020!1.34e-15!34;UBERON:0002791!7.38e-13!29;UBERON:0003528!7.38e-13!29;UBERON:0001893!7.38e-13!29;UBERON:0007811!2.53e-11!86;UBERON:0000153!1.82e-10!94;UBERON:0002619!1.09e-08!17;UBERON:0000956!1.24e-08!21;UBERON:0001869!1.24e-08!21;UBERON:0000203!1.24e-08!21;UBERON:0002021!3.99e-08!10;UBERON:0000411!3.99e-08!10;UBERON:0001950!3.99e-08!10;UBERON:0000468!2.38e-07!333;UBERON:0003076!8.23e-07!12;UBERON:0003057!8.23e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.25e-35,73;UBERON:0001016,9.29e-35,75;UBERON:0004121,3.41e-31,95;UBERON:0000924,3.41e-31,95;UBERON:0006601,3.41e-31,95;UBERON:0002346,3.72e-30,64;UBERON:0003075,3.72e-30,64;UBERON:0007284,3.72e-30,64;UBERON:0000073,6.77e-28,54;UBERON:0001049,3.62e-26,52;UBERON:0005068,3.62e-26,52;UBERON:0006241,3.62e-26,52;UBERON:0007135,3.62e-26,52;UBERON:0010371,8.87e-26,73;UBERON:0000955,9.90e-23,47;UBERON:0006238,9.90e-23,47;UBERON:0002616,7.32e-22,46;UBERON:0010314,7.58e-21,92;UBERON:0003056,9.17e-21,49;UBERON:0003080,7.09e-19,40;UBERON:0002780,4.47e-18,39;UBERON:0001890,4.47e-18,39;UBERON:0006240,4.47e-18,39;UBERON:0002020,2.16e-16,34;UBERON:0003528,3.39e-13,29;UBERON:0002791,3.39e-13,29;UBERON:0001893,3.39e-13,29;UBERON:0002021,2.11e-09,10;UBERON:0000411,2.11e-09,10;UBERON:0001950,2.11e-09,10;UBERON:0002619,2.32e-09,17;UBERON:0000956,2.54e-08,21;UBERON:0001869,2.54e-08,21;UBERON:0000203,2.54e-08,21;UBERON:0003076,7.79e-08,12;UBERON:0003057,7.79e-08,12
|phase1_expression=12.4916100741739,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0,0,1.56478268869608,1.30815093828268,1.31811709640683,2.72201858703997,1.1198913730029,0,0,0,0,0,0,0,10.3181395038395,11.1088105647127,6.33831403506179,0.338844532069132,0,0,0,0,0.898800331555214,0,0.933206510776299,0.540023753326763,1.05162480675691,18.2816630018434,16.565140571371,3.55223317723367,1.72521847832825,0.919218786610021,38.540558349786,33.0710205640636,38.5552398473171,12.7929699098288,11.4359554503012,11.9810075228055,24.2889209131201,36.5795696520592,34.6852022453359,30.6413728892614,24.0608140550484,18.0807462450542,0.605809546665472,1.43585964202892,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,8.73229202615419,0,0,0,0,0,0,0.34255163915718,0,8.46120192669501,2.4287945747259,3.04465478312141,3.22861696158482,3.16517545160507,3.52766121407114,2.76466500925286,0,4.77177877835708,0,0.323533699894818,0.220841518460394,0,0,27.814175716097,25.3430515244281,0,0,0,0,37.5974504906105,32.4825428001225,11.5602003943835,39.4581206836468,37.0787413128979,34.492815396887,33.7461827180936,5.09196819251581,1.99051152976149,1.76905930903572,2.94618598241064,0.650602214813519,2.98872735763515,3.24111833649629,2.56198190320716,4.89862793889561,3.71529788826064,5.62210347358373,8.79591460512653,0,0.756424320671277,0.527853372491847,0.657587197282725,0.834141747676794,1.39300866608867,1.85203922767149,1.59227413454795,0,0,0,0.207125772535502,0,0.540186184383045,0.473489471170421,0.393528463494808,0.308534225774757,0,0,0.116765342367169,0,0,0.324275238183423,0.438599962275997,0.439100230582101,0.805238512562231,28.3891430561572,7.10041825417063,0,0,1.49301775374664,0.928946687441754,2.83508414908605,1.4117846723634,0.667134131534611,0.570676878337677,0,1.15289268306808,1.00534083520108,0.795825888164603,0.779856348476481,0,0.648414149624083,0.398282546508734,0.758671603812327,0.571242563048644,1.1270773567308,0.814605311381257,0.193952487167626,0.350679099451593,0.126473074248515,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.554259570499814,0.757965647081939,0.651859905768103,0.678980343100753,0,0.167506257441816,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,41.4220522168503,33.4053306787779,0,0.504941854408746,8.83423014365519,9.37052986311932,16.5876016254255,14.0991590792006,15.5959071857676,18.6830510320629,14.5731852602962,15.7818163272108,22.9266911208984,41.1291285019913,1.27746076687442,0.712262414669021,0.81443479676788,2.3095817216155,5.30980553359851,1.45668381692989,1.51161778482376,0.377210159511796,0,0.614870295887855,1.03371317267288,0.727067458955011,0.356497378384721,5.37262488490887,6.32511651449993,7.21948802737308,26.2138496430417,2.88097750450096,2.32845630808958,6.64444808597936,10.2857335512519,8.91844088010353,9.05019613311665,4.26250928760439,0,0,1.10264199027481,0.49465875882444,0.322928853391811,0.482503399425247,0,0.164140899745061,0.291480836629851,34.6745314759653,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0.954670618015114,1.10717597753397,2.03319467126849,1.29606408986162,1.25452977608681,0.87345025498471,0.404593039154462,0.826534557253359,0.785267825952089,0.129614973291793,1.24267862617385,0.56369293868419,0,0,0.777804753376191,1.16243841129958,0.675824501963113,1.87771581833206,4.4269490846943,4.19437377702843,1.44950472495604,1.44015003128933,0,0.202725215290164,0.205421914329655,0.25984164595559,0,0,0,0.147689527174577,0,0,0,0,0,0,0.453460767230423,0,0,0,0.965947970160952,0.93841237725591,0.36630324853453,0.214368379079066,2.50786052017682,50.827665835536,39.5879703396172,45.2587455617123,31.7928387335822,42.4751162257798,32.4819375877571,41.1763725141402,32.4231266321439,39.4233895816258,36.7609821343792,0.726511433089237,1.59609949360412,2.39027048055788,1.94485373654635,4.19226325255965,2.94149613520023,3.33370091702423,2.26638562962784,3.20919209591815,6.06473308233114,4.30914809813408,1.88626341386076,2.43467919421694,2.81710670581425,2.87177344778066,5.23923060411381,3.1288768005111,2.50781986602817,3.29668720642645,3.82717192349433,2.74295401908332,2.66213709239006,3.33810665926249,3.34296758254356,2.72917203204459,4.14611578669215,3.10977553883713,2.36762740294059,2.98769050460896,2.80571135828869,3.79632057997357,2.85662998889134,4.50154147486658,3.40861050609125,3.08650577569826,4.74640098082097,3.97683734357194,3.22306581072447,0.956441660344217,0.661774257358546,1.85494268496337
|phase1_expression=12.4916100741739,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0,0,1.56478268869608,1.30815093828268,1.31811709640683,2.72201858703997,1.1198913730029,0,0,0,0,0,0,0,10.3181395038395,11.1088105647127,6.33831403506179,0.338844532069132,0,0,0,0,0.898800331555214,0,0.933206510776299,0.540023753326763,1.05162480675691,18.2816630018434,16.565140571371,3.55223317723367,1.72521847832825,0.919218786610021,38.540558349786,33.0710205640636,38.5552398473171,12.7929699098288,11.4359554503012,11.9810075228055,24.2889209131201,36.5795696520592,34.6852022453359,30.6413728892614,24.0608140550484,18.0807462450542,0.605809546665472,1.43585964202892,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,8.73229202615419,0,0,0,0,0,0,0.34255163915718,0,8.46120192669501,2.4287945747259,3.04465478312141,3.22861696158482,3.16517545160507,3.52766121407114,2.76466500925286,0,4.77177877835708,0,0.323533699894818,0.220841518460394,0,0,27.814175716097,25.3430515244281,0,0,0,0,37.5974504906105,32.4825428001225,11.5602003943835,39.4581206836468,37.0787413128979,34.492815396887,33.7461827180936,5.09196819251581,1.99051152976149,1.76905930903572,2.94618598241064,0.650602214813519,2.98872735763515,3.24111833649629,2.56198190320716,4.89862793889561,3.71529788826064,5.62210347358373,8.79591460512653,0,0.756424320671277,0.527853372491847,0.657587197282725,0.834141747676794,1.39300866608867,1.85203922767149,1.59227413454795,0,0,0,0.207125772535502,0,0.540186184383045,0.473489471170421,0.393528463494808,0.308534225774757,0,0,0.116765342367169,0,0,0.324275238183423,0.438599962275997,0.439100230582101,0.805238512562231,28.3891430561572,7.10041825417063,0,0,1.49301775374664,0.928946687441754,2.83508414908605,1.4117846723634,0.667134131534611,0.570676878337677,0,1.15289268306808,1.00534083520108,0.795825888164603,0.779856348476481,0,0.648414149624083,0.398282546508734,0.758671603812327,0.571242563048644,1.1270773567308,0.814605311381257,0.193952487167626,0.350679099451593,0.126473074248515,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.554259570499814,0.757965647081939,0.651859905768103,0.678980343100753,0,0.167506257441816,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,41.4220522168503,33.4053306787779,0,0.504941854408746,8.83423014365519,9.37052986311932,16.5876016254255,14.0991590792006,15.5959071857676,18.6830510320629,14.5731852602962,15.7818163272108,22.9266911208984,41.1291285019913,1.27746076687442,0.712262414669021,0.81443479676788,2.3095817216155,5.30980553359851,1.45668381692989,1.51161778482376,0.377210159511796,0,0.614870295887855,1.03371317267288,0.727067458955011,0.356497378384721,5.37262488490887,6.32511651449993,7.21948802737308,26.2138496430417,2.88097750450096,2.32845630808958,6.64444808597936,10.2857335512519,8.91844088010353,9.05019613311665,4.26250928760439,0,0,1.10264199027481,0.49465875882444,0.322928853391811,0.482503399425247,0,0.164140899745061,0.291480836629851,34.6745314759653,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0.954670618015114,1.10717597753397,2.03319467126849,1.29606408986162,1.25452977608681,0.87345025498471,0.404593039154462,0.826534557253359,0.785267825952089,0.129614973291793,1.24267862617385,0.56369293868419,0,0,0.777804753376191,1.16243841129958,0.675824501963113,1.87771581833206,4.4269490846943,4.19437377702843,1.44950472495604,1.44015003128933,0,0.202725215290164,0.205421914329655,0.25984164595559,0,0,0,0.147689527174577,0,0,0,0,0,0,0.453460767230423,0,0,0,0.965947970160952,0.93841237725591,0.36630324853453,0.214368379079066,2.50786052017682,50.827665835536,39.5879703396172,45.2587455617123,31.7928387335822,42.4751162257798,32.4819375877571,41.1763725141402,32.4231266321439,39.4233895816258,36.7609821343792,0.726511433089237,1.59609949360412,2.39027048055788,1.94485373654635,4.19226325255965,2.94149613520023,3.33370091702423,2.26638562962784,3.20919209591815,6.06473308233114,4.30914809813408,1.88626341386076,2.43467919421694,2.81710670581425,2.87177344778066,5.23923060411381,3.1288768005111,2.50781986602817,3.29668720642645,3.82717192349433,2.74295401908332,2.66213709239006,3.33810665926249,3.34296758254356,2.72917203204459,4.14611578669215,3.10977553883713,2.36762740294059,2.98769050460896,2.80571135828869,3.79632057997357,2.85662998889134,4.50154147486658,3.40861050609125,3.08650577569826,4.74640098082097,3.97683734357194,3.22306581072447,0.956441660344217,0.661774257358546,1.85494268496337
|short_description=p1@Nalcn
|short_description=p1@Nalcn
}}
}}

Latest revision as of 17:28, 25 September 2015

Short description:p1@Nalcn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nalcn_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000000201, ENSMUST00000072254, NM_177393, uc007vbq.1, uc007vbr.1, uc007vbs.1, uc007vbt.1, uc011zqp.1_5end
EntrezGene:Nalcn
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nalcn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C310.32
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.57
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.55
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D338.54
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F333.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D738.56
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.44
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.29
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E536.58
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I634.69
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D630.64
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F624.06
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.08
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.73
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D78.46
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F53.17
adrenal gland, neonate N00.CNhs11191.1311-23C13.53
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H14.77
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B227.81
cerebellum, neonate N30.CNhs11135.1395-42I225.34
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A437.60
corpus striatum, adult.CNhs10487.19-21D832.48
corpus striatum, neonate N00.CNhs11226.630-43F111.56
cortex, adult.CNhs10473.12-14D539.46
cortex, neonate N30.CNhs11107.1392-42F237.08
diencephalon, adult.CNhs10482.20-12F234.49
diencephalon, neonate N30.CNhs11201.1388-42B233.75
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.09
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C93.24
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C64.90
eyeball, neonate N01.CNhs11140.1532-43E73.72
eyeball, neonate N02.CNhs11205.1551-44G85.62
eyeball, neonate N16.CNhs11188.777-19A28.80
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E828.39
hippocampus, neonate N00.CNhs11228.627-43G17.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C241.42
medulla oblongata, neonate N30.CNhs11200.1396-42A333.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.37
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.10
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.60
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.57
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.78
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D622.93
olfactory brain, adult.CNhs10489.18-22I941.13
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G826.21
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A56.64
pituitary gland, embryo E15.CNhs10592.427-16B910.29
pituitary gland, embryo E16.CNhs11036.449-43F68.92
pituitary gland, embryo E17.CNhs11039.1265-44F59.05
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C934.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I44.43
testis, neonate N10.CNhs11204.763-44D94.19
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A150.83
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A239.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A345.26
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D731.79
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A442.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A532.48
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A641.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A732.42
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A839.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A936.76
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.87
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron5.10e-1533
neuronal stem cell5.10e-1533
neuroblast5.10e-1533
electrically signaling cell5.10e-1533
ectodermal cell8.69e-1344
neurectodermal cell8.69e-1344
neural cell2.59e-1243
electrically responsive cell9.24e-1139
electrically active cell9.24e-1139
CNS neuron (sensu Vertebrata)2.53e-0923
neuroblast (sensu Vertebrata)2.53e-0923

Uber anatomy
Ontology termp-valuen
central nervous system1.25e-3573
nervous system9.29e-3575
ectoderm-derived structure3.41e-3195
ectoderm3.41e-3195
presumptive ectoderm3.41e-3195
neurectoderm3.72e-3064
neural plate3.72e-3064
presumptive neural plate3.72e-3064
regional part of nervous system6.77e-2854
neural tube3.62e-2652
neural rod3.62e-2652
future spinal cord3.62e-2652
neural keel3.62e-2652
ecto-epithelium8.87e-2673
brain9.90e-2347
future brain9.90e-2347
regional part of brain7.32e-2246
structure with developmental contribution from neural crest7.58e-2192
pre-chordal neural plate9.17e-2149
anterior neural tube7.09e-1940
regional part of forebrain4.47e-1839
forebrain4.47e-1839
future forebrain4.47e-1839
gray matter2.16e-1634
brain grey matter3.39e-1329
regional part of telencephalon3.39e-1329
telencephalon3.39e-1329
occipital lobe2.11e-0910
visual cortex2.11e-0910
neocortex2.11e-0910
regional part of cerebral cortex2.32e-0917
cerebral cortex2.54e-0821
cerebral hemisphere2.54e-0821
pallium2.54e-0821
posterior neural tube7.79e-0812
chordal neural plate7.79e-0812
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