FFCP PHASE1:Hg19::chr10:120830442..120830466,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:120830442..120830466,- | |||
|description=CAGE_peak_at_chr10:120830442..120830466,- | |description=CAGE_peak_at_chr10:120830442..120830466,- | ||
|id=chr10:120830442..120830466,- | |id=chr10:120830442..120830466,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000785;7.74e-12;1!CL:0000819;7.74e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,7.76e-12,1;CL:0002549,9.96e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;7.74e-12;1!UBERON:0010226;7.74e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;7.74e-12;1!DOID:8675;7.74e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,7.76e-12,1;DOID:8675,7.76e-12,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;7.74e-12;1!UBERON:0001154;7.74e-12;1!UBERON:0001153;7.74e-12;1!UBERON:0009854;7.74e-12;1!UBERON:0002082;7.74e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.62e-12,1;UBERON:0001153,5.62e-12,1;UBERON:0001045,5.62e-12,1;UBERON:0002084,6.26e-12,1;UBERON:0002082,6.26e-12,1;UBERON:0010226,6.26e-12,1;UBERON:0005629,9.96e-07,2;UBERON:0005358,9.96e-07,2;UBERON:0001886,9.96e-07,2;UBERON:0004086,9.96e-07,2;UBERON:0005282,9.96e-07,2;UBERON:0005281,9.96e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0.994192127183747,0.672325146451775,0,0,0.975865597581014,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.229240217243854,0.410502947249729,0,0.393364276848904,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0.822335776043652,0,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.580418477257168,0,0,0.251248665256743,1.0429658368404,0.434377689410233,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.616804496998528,0,0.32592226663359,0,0,0,0,0,0,0,0.260118695119756,0.328875809207352,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0.802320587350522,0.289648807765598,0,0,0.12786256184353,0.722878304769133,0,0,0,0,0.283604451492204,0.221729397462564,0.351339142772504,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.66944122552934,0,0,0.488124115096339,0,0.81014194788176,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,1.72852777344,0,0,0,0.298897361103602,0,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0.336672227908132,0,0.554128230968366,0,0,0,0.226864366320042,0,0,0,0,0,0.515281080091258,0.37223371266318,0.337552664482532,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0.710019185033229,0.201504196455281,0,0.193260853163297,0,0,0.365921118388786,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0.928735856063958,0,0.236613600079688,1.01150814046861,0.241011029883482,0.110293972732394,0,0.474541238222193,0,0.196221465125346,0,0,0,0,1.47008711385542,2.53510069643662,0.982827216677626,0,0,0,0.343135620597051,0.109750285408626,0,0.301586917234893,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0,0,0.12624243342638,0.190493682876507,0,0,0,0,0.300343057843917,0.571652865261156,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0.224170287987055,0,0,0.513372145118994,0,1.30139853857622,0,0,0,0,2.99161459204025,0,0,0,0.271265023699736,0.623912584592421,1.24900292158013,0.630809660135739,0.234282829985426,0,0,0,0,0,0.347534457872331,0,0,0,0.862856803274467,0.213455115606889,0,0,0,0,0.153461973288062,0,0.256278298511402,0.511707249066704,0.321707842287215,0,0.154209693802656,0,0,0.519254429183621,0.232420756919918,0.241718899183244,0,0.184161977871793,0.34444334449382,0.364182336013434,0.131124414959424,0,0.15403067420883,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0,0,0,0,0.261435451024901,0,0.328014645699706,0.650756789328606,0.103041011647722,0.27470839445503,0,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0.340906509664404,0.178064071293475,0.165284915360978,0,0.255225424989168,0.50578890427775,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.371606350251437,0,0.213425530045242,0,0.399158742865633,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0.169291777801603,1.1241165257259,1.61439765752838,0,0.343505344755765,0,0,0.166849141711909,0.390776190804081,0,0,0,0,0,0.18714054040822,0.146508179271894,0.242721043499027,0,0.284136146806413,0,0,0,0.994147647766298,0.140669416410513,0,0.329607748453519,1.05562704063997,0,1.38141957765574,0,0,0.123084805461069,0.311039587661807,0,0.358042349351218,0,1.479651084554,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.227586896570999,0,0.236387681767936,0.344743373241465,0.291604613383254,0.347249989866585,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0.435753854075961,0,0.153900517007594,0.113942055847001,0,0.0897576444097721,0.434589487688032,0,0,0,0,0.156980256395025,0,0,0,0.503464760927528,0,0.158936578980379,0.210998064528027,0.163232808159148,0.282706142867882,0,0,0.265372693510018,0,0,0.123563938946503,0,0.134802265961354,0,0,1.27718352450966,0,0.242780379534093,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0.554698692052555,0.173559738335131,0.0979923974143777,0.0870592065804026,0.17472666824203,0.343972064943233,0.290268993867255,0.146178634172371,0.410577285266046,0.969890164884194,0.0882561266915003,0,0.137041924646751,0.19871461170299,0,0.391102765469606,0,0.213452994739353,0.19980960958213,0.432271251462318,0,0.171594997861965,0.288109595976299,0.248505071130865,0,0.135904206073614,0.104602846312333,0.203996435272644,0,0.600420288709789,0,0,0,0,0,0.687481272035051,0,0,0,0.446342914883745,0.134366944973453,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0.136203406111576,0.321506296930038,0.825236619583403,0.415440338029185,0,0,0,0,0.157611414598396,0,0.211200673038813,0.179287339332845,0,0,1.32418394073086,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.427149650270779,0,0,0.992332043623902,0.395223263795889,0.243585196761792,0,0,0,0,0.327872630709804,0,0,0.610131324509816,0,0,0,0,0.553394539744923,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0.295710299979268,0.159296767163702,0,0,0,0.265841714557995,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0.400027764663154,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0.537266523244462,0,0.219284049578707,0,0.192914038270915,0,0.256241518587947,0,1.21543982470953,0.276516872303462,0,0.132864840313363,0,0.327609848846413,0,0.211312123358627,0.39997479170986,0,0.344429959321631,0,0,0,0,0,0,0,0.54604819096007,0.169732529954025,0.212574920101683,0.371807292777007,0,0,0.0788617450012534,0,0,0.3062454773532,0,1.41696576325585,0,0,0.756215088665154,0,0.161475645631851,0,0.196295437002051,0.235939446695481,0,1.27078232765372,0.381382095467167,0,0.198916222116275,0,0,0,0.523813388962845,0.49131575253029,0,0.0675375846183947,0,0,0,0.546974809018219,0,0.496211178389294,0.703484977438482,0.127762427639595,0,0,0,0,0.0887023701626388,0.460935950223117,0,0.135939465953663,0,0.472775363535873,0.333694205676207,0.078493092850514,0,0.560544326627578,0,0,0,0.0714765441766563,0.47404083519818,0.348724276104376,0.173858272302579,0,1.03608082081518,0.3414369541879,0.691259661814092,0,0.118332000730565,0.255640214277473,0,0,0.62041277132864,0.955538938977433,0.111855431797792,0.098150233615243,0,0,0.615976841137482,0,0,0.233939463462106,0.397901550322736,0,0,0.329821550236287,0,0.154348316215889,0.874238242015829,0.470317296361523,0.490296643507811,0.235676547101626,0.196308467114945,0,0.4226557275834,0.169927114687817,0.0939839179798536,0.128915775947154,0.199882311849858,0.178553938605658,0.352894871715692,0,0.730336388246517,0.917458566809082,0,0.315543124386369,0.0679914901909147,0,0.5290268405154,0,0.462175628631418,0.865253124247578,0.504665699340316,0.218531143927391,0.633492505057185,0.101988829741982,0,0.0918948995348449,0.50141507858475,0.378893491091197,0,0,0.310298987585686,0,0,0.258355639344024,0.0620747142958579,0.224263725161227,0.12729431655633,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0.426909383510862,0,0.269475606319761,0,0.122241444182866,0.406896178315738,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0.994192127183747,0.672325146451775,0,0,0.975865597581014,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.229240217243854,0.410502947249729,0,0.393364276848904,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0.822335776043652,0,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.580418477257168,0,0,0.251248665256743,1.0429658368404,0.434377689410233,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.616804496998528,0,0.32592226663359,0,0,0,0,0,0,0,0.260118695119756,0.328875809207352,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0.802320587350522,0.289648807765598,0,0,0.12786256184353,0.722878304769133,0,0,0,0,0.283604451492204,0.221729397462564,0.351339142772504,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.66944122552934,0,0,0.488124115096339,0,0.81014194788176,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,1.72852777344,0,0,0,0.298897361103602,0,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0.336672227908132,0,0.554128230968366,0,0,0,0.226864366320042,0,0,0,0,0,0.515281080091258,0.37223371266318,0.337552664482532,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0.710019185033229,0.201504196455281,0,0.193260853163297,0,0,0.365921118388786,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0.928735856063958,0,0.236613600079688,1.01150814046861,0.241011029883482,0.110293972732394,0,0.474541238222193,0,0.196221465125346,0,0,0,0,1.47008711385542,2.53510069643662,0.982827216677626,0,0,0,0.343135620597051,0.109750285408626,0,0.301586917234893,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0,0,0.12624243342638,0.190493682876507,0,0,0,0,0.300343057843917,0.571652865261156,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0.224170287987055,0,0,0.513372145118994,0,1.30139853857622,0,0,0,0,2.99161459204025,0,0,0,0.271265023699736,0.623912584592421,1.24900292158013,0.630809660135739,0.234282829985426,0,0,0,0,0,0.347534457872331,0,0,0,0.862856803274467,0.213455115606889,0,0,0,0,0.153461973288062,0,0.256278298511402,0.511707249066704,0.321707842287215,0,0.154209693802656,0,0,0.519254429183621,0.232420756919918,0.241718899183244,0,0.184161977871793,0.34444334449382,0.364182336013434,0.131124414959424,0,0.15403067420883,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0,0,0,0,0.261435451024901,0,0.328014645699706,0.650756789328606,0.103041011647722,0.27470839445503,0,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0.340906509664404,0.178064071293475,0.165284915360978,0,0.255225424989168,0.50578890427775,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.371606350251437,0,0.213425530045242,0,0.399158742865633,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0.169291777801603,1.1241165257259,1.61439765752838,0,0.343505344755765,0,0,0.166849141711909,0.390776190804081,0,0,0,0,0,0.18714054040822,0.146508179271894,0.242721043499027,0,0.284136146806413,0,0,0,0.994147647766298,0.140669416410513,0,0.329607748453519,1.05562704063997,0,1.38141957765574,0,0,0.123084805461069,0.311039587661807,0,0.358042349351218,0,1.479651084554,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.227586896570999,0,0.236387681767936,0.344743373241465,0.291604613383254,0.347249989866585,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0.435753854075961,0,0.153900517007594,0.113942055847001,0,0.0897576444097721,0.434589487688032,0,0,0,0,0.156980256395025,0,0,0,0.503464760927528,0,0.158936578980379,0.210998064528027,0.163232808159148,0.282706142867882,0,0,0.265372693510018,0,0,0.123563938946503,0,0.134802265961354,0,0,1.27718352450966,0,0.242780379534093,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0.554698692052555,0.173559738335131,0.0979923974143777,0.0870592065804026,0.17472666824203,0.343972064943233,0.290268993867255,0.146178634172371,0.410577285266046,0.969890164884194,0.0882561266915003,0,0.137041924646751,0.19871461170299,0,0.391102765469606,0,0.213452994739353,0.19980960958213,0.432271251462318,0,0.171594997861965,0.288109595976299,0.248505071130865,0,0.135904206073614,0.104602846312333,0.203996435272644,0,0.600420288709789,0,0,0,0,0,0.687481272035051,0,0,0,0.446342914883745,0.134366944973453,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0.136203406111576,0.321506296930038,0.825236619583403,0.415440338029185,0,0,0,0,0.157611414598396,0,0.211200673038813,0.179287339332845,0,0,1.32418394073086,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.427149650270779,0,0,0.992332043623902,0.395223263795889,0.243585196761792,0,0,0,0,0.327872630709804,0,0,0.610131324509816,0,0,0,0,0.553394539744923,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0.295710299979268,0.159296767163702,0,0,0,0.265841714557995,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0.400027764663154,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0.537266523244462,0,0.219284049578707,0,0.192914038270915,0,0.256241518587947,0,1.21543982470953,0.276516872303462,0,0.132864840313363,0,0.327609848846413,0,0.211312123358627,0.39997479170986,0,0.344429959321631,0,0,0,0,0,0,0,0.54604819096007,0.169732529954025,0.212574920101683,0.371807292777007,0,0,0.0788617450012534,0,0,0.3062454773532,0,1.41696576325585,0,0,0.756215088665154,0,0.161475645631851,0,0.196295437002051,0.235939446695481,0,1.27078232765372,0.381382095467167,0,0.198916222116275,0,0,0,0.523813388962845,0.49131575253029,0,0.0675375846183947,0,0,0,0.546974809018219,0,0.496211178389294,0.703484977438482,0.127762427639595,0,0,0,0,0.0887023701626388,0.460935950223117,0,0.135939465953663,0,0.472775363535873,0.333694205676207,0.078493092850514,0,0.560544326627578,0,0,0,0.0714765441766563,0.47404083519818,0.348724276104376,0.173858272302579,0,1.03608082081518,0.3414369541879,0.691259661814092,0,0.118332000730565,0.255640214277473,0,0,0.62041277132864,0.955538938977433,0.111855431797792,0.098150233615243,0,0,0.615976841137482,0,0,0.233939463462106,0.397901550322736,0,0,0.329821550236287,0,0.154348316215889,0.874238242015829,0.470317296361523,0.490296643507811,0.235676547101626,0.196308467114945,0,0.4226557275834,0.169927114687817,0.0939839179798536,0.128915775947154,0.199882311849858,0.178553938605658,0.352894871715692,0,0.730336388246517,0.917458566809082,0,0.315543124386369,0.0679914901909147,0,0.5290268405154,0,0.462175628631418,0.865253124247578,0.504665699340316,0.218531143927391,0.633492505057185,0.101988829741982,0,0.0918948995348449,0.50141507858475,0.378893491091197,0,0,0.310298987585686,0,0,0.258355639344024,0.0620747142958579,0.224263725161227,0.12729431655633,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0.426909383510862,0,0.269475606319761,0,0.122241444182866,0.406896178315738,0,0,0.320568492303233 | ||
|short_description=p@chr10:120830442..120830466,- | |short_description=p@chr10:120830442..120830466,- | ||
}} | }} |
Latest revision as of 10:57, 23 July 2015
Short description: | p@chr10:120830442..120830466, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:120830442..120830466, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 7.76e-12 | 1 |
fibroblast of choroid plexus | 9.96e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 5.62e-12 | 1 |
caecum | 5.62e-12 | 1 |
midgut | 5.62e-12 | 1 |
heart left ventricle | 6.26e-12 | 1 |
cardiac ventricle | 6.26e-12 | 1 |
future cardiac ventricle | 6.26e-12 | 1 |
vascular plexus | 9.96e-07 | 2 |
ventricle of nervous system | 9.96e-07 | 2 |
choroid plexus | 9.96e-07 | 2 |
brain ventricle | 9.96e-07 | 2 |
ventricular system of brain | 9.96e-07 | 2 |
ventricular system of central nervous system | 9.96e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 7.76e-12 | 1 |
lymphosarcoma | 7.76e-12 | 1 |