FFCP PHASE1:Mm9::chr13:54890787..54890858,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74257 | |EntrezGene=74257 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9PWC3 | |UniProt=E9PWC3 | ||
|association_with_transcript=0bp_to_ENSMUST00000163796_5end | |association_with_transcript=0bp_to_ENSMUST00000163796_5end | ||
|cluster_id=chr13:54890787..54890858,+ | |||
|description=CAGE_peak_1_at_Tspan17_5end | |description=CAGE_peak_1_at_Tspan17_5end | ||
|id=chr13:54890787..54890858,+ | |id=chr13:54890787..54890858,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.75e-13!50;CL:0002321!4.14e-12!70;CL:0000220!4.14e-12!70;CL:0000221!4.09e-11!44;CL:0000133!4.09e-11!44;CL:0002319!1.17e-10!43;CL:0000393!3.36e-08!39;CL:0000211!3.36e-08!39;CL:0000333!4.16e-07!10;CL:0000095!4.16e-07!10;CL:0000243!4.16e-07!10;CL:0000123!4.16e-07!10;CL:0000125!4.16e-07!10;CL:0000030!4.16e-07!10;CL:0000339!4.16e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.86e-12,70;CL:0000221,4.05e-11,44;CL:0000133,4.05e-11,44;CL:0002319,1.16e-10,43;CL:0000393,3.34e-08,39;CL:0000211,3.34e-08,39;CL:0000333,4.13e-07,10;CL:0000095,4.13e-07,10;CL:0000243,4.13e-07,10;CL:0000123,4.13e-07,10;CL:0000125,4.13e-07,10;CL:0000030,4.13e-07,10;CL:0000339,4.13e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.75e-20!102;UBERON:0000924!5.75e-20!102;UBERON:0006601!5.75e-20!102;UBERON:0000073!4.50e-18!75;UBERON:0001016!4.50e-18!75;UBERON:0001017!5.63e-17!73;UBERON:0005743!5.63e-17!73;UBERON:0002346!8.76e-11!71;UBERON:0003075!8.76e-11!71;UBERON:0007284!8.76e-11!71;UBERON:0001049!8.55e-10!52;UBERON:0005068!8.55e-10!52;UBERON:0006241!8.55e-10!52;UBERON:0007135!8.55e-10!52;UBERON:0000033!6.41e-09!63;UBERON:0000955!1.58e-08!50;UBERON:0006238!1.58e-08!50;UBERON:0002616!2.67e-08!49;UBERON:0003076!6.65e-08!12;UBERON:0003057!6.65e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.44e-19,95;UBERON:0000924,8.44e-19,95;UBERON:0006601,8.44e-19,95;UBERON:0001016,4.42e-18,75;UBERON:0001017,5.53e-17,73;UBERON:0010371,2.55e-11,73;UBERON:0000073,1.02e-10,54;UBERON:0002346,7.11e-10,64;UBERON:0003075,7.11e-10,64;UBERON:0007284,7.11e-10,64;UBERON:0001049,8.47e-10,52;UBERON:0005068,8.47e-10,52;UBERON:0006241,8.47e-10,52;UBERON:0007135,8.47e-10,52;UBERON:0010314,1.71e-08,92;UBERON:0003076,6.61e-08,12;UBERON:0003057,6.61e-08,12;UBERON:0000955,3.00e-07,47;UBERON:0006238,3.00e-07,47;UBERON:0002616,4.98e-07,46 | |||
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| ||
|short_description=p1@Tspan17 | |short_description=p1@Tspan17 | ||
}} | }} |
Latest revision as of 18:23, 1 October 2015
Short description: | p1@Tspan17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tspan17_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000163796_5end |
EntrezGene: | Tspan17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.86e-12 | 70 |
ectodermal cell | 4.05e-11 | 44 |
neurectodermal cell | 4.05e-11 | 44 |
neural cell | 1.16e-10 | 43 |
electrically responsive cell | 3.34e-08 | 39 |
electrically active cell | 3.34e-08 | 39 |
migratory neural crest cell | 4.13e-07 | 10 |
neuron associated cell | 4.13e-07 | 10 |
glial cell (sensu Vertebrata) | 4.13e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 4.13e-07 | 10 |
glial cell | 4.13e-07 | 10 |
glioblast | 4.13e-07 | 10 |
glioblast (sensu Vertebrata) | 4.13e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 8.44e-19 | 95 |
ectoderm | 8.44e-19 | 95 |
presumptive ectoderm | 8.44e-19 | 95 |
nervous system | 4.42e-18 | 75 |
central nervous system | 5.53e-17 | 73 |
ecto-epithelium | 2.55e-11 | 73 |
regional part of nervous system | 1.02e-10 | 54 |
neurectoderm | 7.11e-10 | 64 |
neural plate | 7.11e-10 | 64 |
presumptive neural plate | 7.11e-10 | 64 |
neural tube | 8.47e-10 | 52 |
neural rod | 8.47e-10 | 52 |
future spinal cord | 8.47e-10 | 52 |
neural keel | 8.47e-10 | 52 |
structure with developmental contribution from neural crest | 1.71e-08 | 92 |
posterior neural tube | 6.61e-08 | 12 |
chordal neural plate | 6.61e-08 | 12 |
brain | 3.00e-07 | 47 |
future brain | 3.00e-07 | 47 |
regional part of brain | 4.98e-07 | 46 |