FFCP PHASE1:Hg19::chr10:105421477..105421518,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9644 | |EntrezGene=9644 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23664 | |HGNC=23664 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZ35 | |UniProt=F5GZ35 | ||
|association_with_transcript=-15bp_to_ENST00000538130_5end | |association_with_transcript=-15bp_to_ENST00000538130_5end | ||
|cluster_id=chr10:105421477..105421518,- | |||
|description=CAGE_peak_2_at_SH3PXD2A_5end | |description=CAGE_peak_2_at_SH3PXD2A_5end | ||
|id=chr10:105421477..105421518,- | |id=chr10:105421477..105421518,- | ||
|ontology_enrichment_celltype=CL:0000055!1.65e-24!180;CL:0000057!3.18e-18!75;CL:0002620!2.81e-08!23;CL:0000183!4.18e-08!59;CL:0000680!6.72e-08!57;CL:0000056!6.72e-08!57;CL:0000355!6.72e-08!57;CL:0000187!1.23e-07!54;CL:0000136!4.93e-07!15 | |ontology_enrichment_celltype=CL:0000055!1.65e-24!180;CL:0000057!3.18e-18!75;CL:0002620!2.81e-08!23;CL:0000183!4.18e-08!59;CL:0000680!6.72e-08!57;CL:0000056!6.72e-08!57;CL:0000355!6.72e-08!57;CL:0000187!1.23e-07!54;CL:0000136!4.93e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.23e-08;23!CL:0000057;9.12e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.13e-19,76;CL:0000680,2.12e-08,58;CL:0000056,2.12e-08,58;CL:0000355,2.12e-08,58;CL:0002620,2.13e-08,23;CL:0000187,3.94e-08,55;CL:0000136,3.93e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!2.93e-10!70;UBERON:0000914!3.40e-10!83;UBERON:0002329!3.40e-10!83;UBERON:0003077!3.40e-10!83;UBERON:0003059!3.40e-10!83;UBERON:0007282!3.40e-10!83;UBERON:0009618!3.40e-10!83;UBERON:0007285!3.40e-10!83;UBERON:0002385!1.68e-09!63;UBERON:0001015!1.68e-09!63;UBERON:0000383!1.68e-09!63;UBERON:0005256!3.48e-09!143;UBERON:0001134!3.92e-09!61;UBERON:0002036!3.92e-09!61;UBERON:0003082!3.92e-09!61;UBERON:0000486!2.05e-07!82;UBERON:0002199!2.14e-07!45;UBERON:0002416!2.14e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;8.87e-07;31!UBERON:0001015;8.87e-07;31!UBERON:0000383;8.87e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.69e-11,160;UBERON:0009142,1.69e-11,160;UBERON:0007524,5.52e-11,73;UBERON:0002329,8.05e-11,71;UBERON:0003059,8.05e-11,71;UBERON:0007282,8.05e-11,71;UBERON:0004290,8.05e-11,71;UBERON:0009618,8.05e-11,71;UBERON:0003077,1.18e-10,72;UBERON:0007285,1.18e-10,72;UBERON:0002385,4.78e-10,64;UBERON:0001015,4.78e-10,64;UBERON:0000383,4.78e-10,64;UBERON:0001134,1.14e-09,62;UBERON:0002036,1.14e-09,62;UBERON:0003082,1.14e-09,62;UBERON:0007503,1.18e-09,78;UBERON:0005256,3.59e-09,122;UBERON:0002199,7.58e-08,46;UBERON:0002416,7.58e-08,46;UBERON:0000486,9.31e-08,83 | |||
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| ||
|short_description=p2@SH3PXD2A | |short_description=p2@SH3PXD2A | ||
}} | }} |
Latest revision as of 04:05, 16 September 2015
Short description: | p2@SH3PXD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SH3PXD2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000538130_5end |
EntrezGene: | SH3PXD2A |
HGNC: | 23664 |
UniProt: | F5GZ35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.13e-19 | 76 |
muscle precursor cell | 2.12e-08 | 58 |
myoblast | 2.12e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.12e-08 | 58 |
skin fibroblast | 2.13e-08 | 23 |
muscle cell | 3.94e-08 | 55 |
fat cell | 3.93e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.69e-11 | 160 |
entire embryonic mesenchyme | 1.69e-11 | 160 |
dense mesenchyme tissue | 5.52e-11 | 73 |
somite | 8.05e-11 | 71 |
presomitic mesoderm | 8.05e-11 | 71 |
presumptive segmental plate | 8.05e-11 | 71 |
dermomyotome | 8.05e-11 | 71 |
trunk paraxial mesoderm | 8.05e-11 | 71 |
paraxial mesoderm | 1.18e-10 | 72 |
presumptive paraxial mesoderm | 1.18e-10 | 72 |
muscle tissue | 4.78e-10 | 64 |
musculature | 4.78e-10 | 64 |
musculature of body | 4.78e-10 | 64 |
skeletal muscle tissue | 1.14e-09 | 62 |
striated muscle tissue | 1.14e-09 | 62 |
myotome | 1.14e-09 | 62 |
epithelial vesicle | 1.18e-09 | 78 |
trunk mesenchyme | 3.59e-09 | 122 |
integument | 7.58e-08 | 46 |
integumental system | 7.58e-08 | 46 |
multilaminar epithelium | 9.31e-08 | 83 |