FFCP PHASE1:Mm9::chr13:33057192..33057199,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20708 | |EntrezGene=20708 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1641 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_ENSMUST00000110293_5end | |association_with_transcript=10bp_to_ENSMUST00000110293_5end | ||
|cluster_id=chr13:33057192..33057199,+ | |||
|description=CAGE_peak_6_at_Serpinb6b_5end | |description=CAGE_peak_6_at_Serpinb6b_5end | ||
|id=chr13:33057192..33057199,+ | |id=chr13:33057192..33057199,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.37e-07,3;CL:0002202,3.37e-07,3;CL:0000069,3.37e-07,3;CL:0002632,3.37e-07,3;CL:0002368,3.37e-07,3;CL:0000307,3.37e-07,3;CL:0000377,3.37e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!1.55e-11!17;UBERON:0005181!1.55e-11!17;UBERON:0002224!1.55e-11!17;UBERON:0000915!1.55e-11!17;UBERON:0008947!1.55e-11!17;UBERON:0003258!1.55e-11!17;UBERON:0004535!3.12e-11!23;UBERON:0001009!3.12e-11!23;UBERON:0004872!2.55e-10!33;UBERON:0002048!4.42e-09!14;UBERON:0000117!4.42e-09!14;UBERON:0000171!4.42e-09!14;UBERON:0000170!4.42e-09!14;UBERON:0005597!4.42e-09!14;UBERON:0000118!4.42e-09!14;UBERON:0003103!5.25e-09!43;UBERON:0007100!4.47e-08!18;UBERON:0000948!4.47e-08!18;UBERON:0005498!4.47e-08!18;UBERON:0004140!4.47e-08!18;UBERON:0009881!4.47e-08!18;UBERON:0004141!4.47e-08!18;UBERON:0003084!4.47e-08!18;UBERON:0007005!4.47e-08!18;UBERON:0004139!4.47e-08!18;UBERON:0004291!4.47e-08!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,8.32e-27,17;UBERON:0005181,8.32e-27,17;UBERON:0002224,8.32e-27,17;UBERON:0000915,8.32e-27,17;UBERON:0008947,8.32e-27,17;UBERON:0003258,8.32e-27,17;UBERON:0002048,4.11e-21,14;UBERON:0000117,4.11e-21,14;UBERON:0000171,4.11e-21,14;UBERON:0000170,4.11e-21,14;UBERON:0005597,4.11e-21,14;UBERON:0000118,4.11e-21,14;UBERON:0005153,3.22e-17,17;UBERON:0005157,1.73e-14,20;UBERON:0001004,4.55e-12,42;UBERON:0000065,2.88e-10,41;UBERON:0001048,1.06e-07,134;UBERON:0003126,3.37e-07,3;UBERON:0001005,3.37e-07,3;UBERON:0007196,3.37e-07,3;UBERON:0001558,3.37e-07,3;UBERON:0009569,4.22e-07,66;UBERON:0004535,6.75e-07,23;UBERON:0001009,6.75e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.367093504323363,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,1.73918693221007,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,3.68034769719064,1.26679932737549,0.505524445014783,0.22836775943812,0.517875767294343,0.148442139064825,0,0,0,0.301445281105245,0.117588707135705,0.376999773989026,0.741584903203122,0.722996784599558,0,0,0,0,0,0,0,0,0.359445373517761,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.252722758433675,0,0,0.229902104433473,0,0,0.136072998302656,0,0,0.258703370739016,0,0,0,0,0,0,0,0.398068533636986,0.702213187313235,0,0,0,0.234526059981096,0.540186184383045,0.23674473558521,0.787056926989615,0.462801338662135,0.465067889500816,0.804820204198858,1.16765342367169,0.987359099480883,1.97000956894914,2.67527071501324,2.33919979880532,0.658650345873152,2.68412837520744,0,0,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.38992817423824,0,0,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.379419222745544,0.738050739898011,0.941992367048249,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,3.32555742299888,0,0.162964976442026,0,0.469380496577004,0.670025029767263,0.952174563544055,5.65887578787617,3.15270288212382,1.32878813789265,1.43509291791738,2.45794972073607,2.24490476425664,3.90552458170081,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.847328283455281,0,0,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0.185194527369712,0,0,0,0.849892149969277,1.39951452323658,0.552799895217695,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,1.24267862617385,0,0,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0,0,0,1.33191572024439,0.0897138566094757,0.167884616364078,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0.320919209591815,0,0.50695859978048,0.377252682772152,0.187283014939765,0.192075457214608,0,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.25384382367503,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0.859484216193193,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.367093504323363,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,1.73918693221007,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,3.68034769719064,1.26679932737549,0.505524445014783,0.22836775943812,0.517875767294343,0.148442139064825,0,0,0,0.301445281105245,0.117588707135705,0.376999773989026,0.741584903203122,0.722996784599558,0,0,0,0,0,0,0,0,0.359445373517761,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.252722758433675,0,0,0.229902104433473,0,0,0.136072998302656,0,0,0.258703370739016,0,0,0,0,0,0,0,0.398068533636986,0.702213187313235,0,0,0,0.234526059981096,0.540186184383045,0.23674473558521,0.787056926989615,0.462801338662135,0.465067889500816,0.804820204198858,1.16765342367169,0.987359099480883,1.97000956894914,2.67527071501324,2.33919979880532,0.658650345873152,2.68412837520744,0,0,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.38992817423824,0,0,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.379419222745544,0.738050739898011,0.941992367048249,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,3.32555742299888,0,0.162964976442026,0,0.469380496577004,0.670025029767263,0.952174563544055,5.65887578787617,3.15270288212382,1.32878813789265,1.43509291791738,2.45794972073607,2.24490476425664,3.90552458170081,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.847328283455281,0,0,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0.185194527369712,0,0,0,0.849892149969277,1.39951452323658,0.552799895217695,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,1.24267862617385,0,0,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0,0,0,1.33191572024439,0.0897138566094757,0.167884616364078,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0.320919209591815,0,0.50695859978048,0.377252682772152,0.187283014939765,0.192075457214608,0,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.25384382367503,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0.859484216193193,0.191288332068843,0,0.231867835620421 | ||
|short_description=p6@Serpinb6b | |short_description=p6@Serpinb6b | ||
}} | }} |
Latest revision as of 12:43, 1 October 2015
Short description: | p6@Serpinb6b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Serpinb6b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1641 |
Association with transcript: | 10bp_to_ENSMUST00000110293_5end |
EntrezGene: | Serpinb6b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.37e-07 | 3 |
epithelial cell of tracheobronchial tree | 3.37e-07 | 3 |
branched duct epithelial cell | 3.37e-07 | 3 |
epithelial cell of lower respiratory tract | 3.37e-07 | 3 |
respiratory epithelial cell | 3.37e-07 | 3 |
tracheal epithelial cell | 3.37e-07 | 3 |
tracheoblast | 3.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 8.32e-27 | 17 |
thoracic segment organ | 8.32e-27 | 17 |
thoracic cavity | 8.32e-27 | 17 |
thoracic segment of trunk | 8.32e-27 | 17 |
respiratory primordium | 8.32e-27 | 17 |
endoderm of foregut | 8.32e-27 | 17 |
lung | 4.11e-21 | 14 |
respiratory tube | 4.11e-21 | 14 |
respiration organ | 4.11e-21 | 14 |
pair of lungs | 4.11e-21 | 14 |
lung primordium | 4.11e-21 | 14 |
lung bud | 4.11e-21 | 14 |
epithelial bud | 3.22e-17 | 17 |
epithelial fold | 1.73e-14 | 20 |
respiratory system | 4.55e-12 | 42 |
respiratory tract | 2.88e-10 | 41 |
primordium | 1.06e-07 | 134 |
trachea | 3.37e-07 | 3 |
respiratory airway | 3.37e-07 | 3 |
tracheobronchial tree | 3.37e-07 | 3 |
lower respiratory tract | 3.37e-07 | 3 |
subdivision of trunk | 4.22e-07 | 66 |
cardiovascular system | 6.75e-07 | 23 |
circulatory system | 6.75e-07 | 23 |