FFCP PHASE1:Hg19::chr10:103559116..103559178,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10724 | |EntrezGene=10724 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7056 | |HGNC=7056 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_ENST00000482611_5end | |association_with_transcript=-27bp_to_ENST00000482611_5end | ||
|cluster_id=chr10:103559116..103559178,- | |||
|description=CAGE_peak_3_at_MGEA5_5end | |description=CAGE_peak_3_at_MGEA5_5end | ||
|id=chr10:103559116..103559178,- | |id=chr10:103559116..103559178,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!2.76e-12!41;UBERON:0001890!2.76e-12!41;UBERON:0006240!2.76e-12!41;UBERON:0001049!9.83e-12!57;UBERON:0005068!9.83e-12!57;UBERON:0006241!9.83e-12!57;UBERON:0007135!9.83e-12!57;UBERON:0003080!2.28e-11!42;UBERON:0002020!4.41e-11!34;UBERON:0003528!4.41e-11!34;UBERON:0007023!9.03e-11!115;UBERON:0001017!5.41e-10!82;UBERON:0002791!7.15e-10!33;UBERON:0001893!8.01e-10!34;UBERON:0001869!1.09e-09!32;UBERON:0005743!2.05e-09!86;UBERON:0002616!2.56e-09!59;UBERON:0002619!3.34e-08!22;UBERON:0000073!3.57e-08!94;UBERON:0001016!3.57e-08!94;UBERON:0000955!5.04e-08!69;UBERON:0006238!5.04e-08!69;UBERON:0000956!6.55e-08!25;UBERON:0000203!6.55e-08!25;UBERON:0001950!3.95e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.42e-10;32!UBERON:0003528;2.48e-10;34!UBERON:0002020;2.48e-10;34!UBERON:0001869;6.69e-10;32!UBERON:0002780;8.94e-10;41!UBERON:0001890;8.94e-10;41!UBERON:0002619;2.78e-09;22!UBERON:0000956;4.00e-09;25!UBERON:0000203;4.00e-09;25!UBERON:0001893;7.84e-09;34!UBERON:0001950;4.86e-08;20!UBERON:0000073;5.13e-08;53!UBERON:0002616;5.13e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.90e-14,56;UBERON:0005068,2.90e-14,56;UBERON:0006241,2.90e-14,56;UBERON:0007135,2.90e-14,56;UBERON:0002780,2.37e-13,41;UBERON:0001890,2.37e-13,41;UBERON:0003080,2.37e-13,41;UBERON:0006240,2.37e-13,41;UBERON:0000073,4.26e-13,53;UBERON:0002616,4.26e-13,53;UBERON:0003528,2.26e-12,34;UBERON:0002020,2.26e-12,34;UBERON:0001017,7.93e-12,81;UBERON:0002791,2.33e-11,32;UBERON:0001869,8.52e-11,32;UBERON:0001893,1.42e-10,34;UBERON:0001016,3.14e-10,89;UBERON:0007023,5.00e-10,114;UBERON:0000955,2.37e-09,68;UBERON:0006238,2.37e-09,68;UBERON:0002346,3.98e-09,86;UBERON:0002619,4.12e-09,22;UBERON:0000956,8.86e-09,25;UBERON:0000203,8.86e-09,25;UBERON:0003075,4.61e-08,82;UBERON:0007284,4.61e-08,82;UBERON:0001950,6.76e-08,20;UBERON:0003056,3.86e-07,61 | |||
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| ||
|short_description=p3@MGEA5 | |short_description=p3@MGEA5 | ||
}} | }} |
Latest revision as of 23:31, 15 September 2015
Short description: | p3@MGEA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MGEA5_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENST00000482611_5end |
EntrezGene: | MGEA5 |
HGNC: | 7056 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.90e-14 | 56 |
neural rod | 2.90e-14 | 56 |
future spinal cord | 2.90e-14 | 56 |
neural keel | 2.90e-14 | 56 |
regional part of forebrain | 2.37e-13 | 41 |
forebrain | 2.37e-13 | 41 |
anterior neural tube | 2.37e-13 | 41 |
future forebrain | 2.37e-13 | 41 |
regional part of nervous system | 4.26e-13 | 53 |
regional part of brain | 4.26e-13 | 53 |
brain grey matter | 2.26e-12 | 34 |
gray matter | 2.26e-12 | 34 |
central nervous system | 7.93e-12 | 81 |
regional part of telencephalon | 2.33e-11 | 32 |
cerebral hemisphere | 8.52e-11 | 32 |
telencephalon | 1.42e-10 | 34 |
nervous system | 3.14e-10 | 89 |
adult organism | 5.00e-10 | 114 |
brain | 2.37e-09 | 68 |
future brain | 2.37e-09 | 68 |
neurectoderm | 3.98e-09 | 86 |
regional part of cerebral cortex | 4.12e-09 | 22 |
cerebral cortex | 8.86e-09 | 25 |
pallium | 8.86e-09 | 25 |
neural plate | 4.61e-08 | 82 |
presumptive neural plate | 4.61e-08 | 82 |
neocortex | 6.76e-08 | 20 |
pre-chordal neural plate | 3.86e-07 | 61 |