Personal tools

FFCP PHASE1:Mm9::chr10:102698914..102698961,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74978
|EntrezGene=74978
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=Q0P5X1,D3Z1J9
|UniProt=Q0P5X1,D3Z1J9
|association_with_transcript=0bp_to_ENSMUST00000020043,ENSMUST00000123364,ENSMUST00000166240,NM_001163559,NM_029134,uc007gyi.1,uc011xmu.1_5end
|association_with_transcript=0bp_to_ENSMUST00000020043,ENSMUST00000123364,ENSMUST00000166240,NM_001163559,NM_029134,uc007gyi.1,uc011xmu.1_5end
|cluster_id=chr10:102698914..102698961,-
|description=CAGE_peak_1_at_Lrriq1_5end
|description=CAGE_peak_1_at_Lrriq1_5end
|id=chr10:102698914..102698961,-
|id=chr10:102698914..102698961,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.90e-17!73;UBERON:0005743!3.90e-17!73;UBERON:0000073!7.19e-17!75;UBERON:0001016!7.19e-17!75;UBERON:0000033!1.23e-14!63;UBERON:0004121!1.23e-13!102;UBERON:0000924!1.23e-13!102;UBERON:0006601!1.23e-13!102;UBERON:0000955!2.30e-13!50;UBERON:0006238!2.30e-13!50;UBERON:0003056!2.98e-13!49;UBERON:0002346!5.50e-13!71;UBERON:0003075!5.50e-13!71;UBERON:0007284!5.50e-13!71;UBERON:0002616!5.68e-13!49;UBERON:0001049!5.73e-13!52;UBERON:0005068!5.73e-13!52;UBERON:0006241!5.73e-13!52;UBERON:0007135!5.73e-13!52;UBERON:0003080!1.74e-11!40;UBERON:0002780!4.23e-11!39;UBERON:0001890!4.23e-11!39;UBERON:0006240!4.23e-11!39;UBERON:0002020!1.32e-09!34;UBERON:0002791!3.61e-09!29;UBERON:0003528!3.61e-09!29;UBERON:0001893!3.61e-09!29;UBERON:0002619!7.37e-08!17;UBERON:0002021!2.43e-07!10;UBERON:0000411!2.43e-07!10;UBERON:0001950!2.43e-07!10;UBERON:0000956!9.35e-07!21;UBERON:0001869!9.35e-07!21;UBERON:0000203!9.35e-07!21;UBERON:0007811!9.51e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.77e-14,54;UBERON:0001017,5.68e-14,73;UBERON:0000955,8.15e-14,47;UBERON:0006238,8.15e-14,47;UBERON:0001049,1.10e-13,52;UBERON:0005068,1.10e-13,52;UBERON:0006241,1.10e-13,52;UBERON:0007135,1.10e-13,52;UBERON:0003056,1.21e-13,49;UBERON:0002346,1.87e-13,64;UBERON:0003075,1.87e-13,64;UBERON:0007284,1.87e-13,64;UBERON:0002616,2.75e-13,46;UBERON:0001016,3.19e-13,75;UBERON:0003080,9.03e-13,40;UBERON:0002780,3.07e-12,39;UBERON:0001890,3.07e-12,39;UBERON:0006240,3.07e-12,39;UBERON:0004121,9.24e-12,95;UBERON:0000924,9.24e-12,95;UBERON:0006601,9.24e-12,95;UBERON:0010371,1.08e-11,73;UBERON:0002619,4.13e-10,17;UBERON:0002021,5.06e-10,10;UBERON:0000411,5.06e-10,10;UBERON:0001950,5.06e-10,10;UBERON:0003528,5.13e-10,29;UBERON:0002791,5.13e-10,29;UBERON:0001893,5.13e-10,29;UBERON:0002020,1.58e-09,34;UBERON:0000956,1.22e-08,21;UBERON:0001869,1.22e-08,21;UBERON:0000203,1.22e-08,21;UBERON:0000025,4.96e-08,114;UBERON:0002048,1.10e-07,14;UBERON:0000117,1.10e-07,14;UBERON:0000171,1.10e-07,14;UBERON:0000170,1.10e-07,14;UBERON:0005597,1.10e-07,14;UBERON:0000118,1.10e-07,14;UBERON:0004111,1.51e-07,122;UBERON:0010314,8.74e-07,92
|phase1_expression=1.60148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9001298953503,0,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.75748946187577,3.30530828426282,0.979904951377538,4.31257693094915,0,0,0,0,0.286533439938757,0,0.606949382578793,1.05798195854407,1.26766280701236,0,0,0,0,0,1.49800055259202,3.45796474789399,0.518448061542388,0,0,0.285650984403804,0.220868540951614,0.244981598429908,0.287536413054709,0,2.20231761998777,2.042997409363,1.38245879930619,0.395658863190582,0.548925861614458,2.08365348222704,0.837548997004143,2.8138130501584,4.27835093775068,2.94628585473668,1.70846016958924,0.372798891650601,0.151452386666368,0.302286240427142,1.44932244350839,0,0,0,0,0,2.66844398250329,0.170430322578058,0,0,1.54927761754349,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,2.39786147410026,0,0.29688427812965,0.173485326766136,0,0,0.150722640552623,0.705532242814229,0.251333182659351,0,0,0,0,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,1.9472783122627,3.20250421973039,1.7591609295801,3.47648640384553,4.34716277461562,2.28566849015516,2.43361894601636,0.916554274652847,1.36847667671102,2.0217820674694,0.631325567659422,0.910843100738926,0.459804208866946,2.34080768746954,2.41127708537144,3.40182495756639,2.8185018462667,1.3118241438362,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0.308534225774757,0,0.536546802799238,0,0.493679549740441,0,0,0,0,0,6.72927835405207,7.51203670368776,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,1.62921062276251,0.387904974335251,0.701358198903186,1.7706230394792,1.03327103585722,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0,0,0.372140947668503,0,0,0,0,8.68339993783042,0,0.651859905768103,0.169745085775188,2.34690248288502,4.85768146581266,3.09456733151818,5.46374214001837,2.99506773801763,2.87904096543407,2.07291199254733,4.42430949732493,3.7990696010497,6.50920763616802,0,0,0,0.275936746304732,1.28440471990234,1.52375192569864,0,0,0,0.780877488593277,0.646270193198397,0.238968797952552,0.668396022247182,0.849229592366497,0.809621403349789,0.292255857911312,0.395287777946524,1.92792789853084,5.10984306749767,0.178065603667255,0.325773918707152,8.74341651754438,0,0,1.209294227859,0.377210159511796,0,0,1.29214146584111,0.363533729477506,1.06949213515416,0,0,1.03135543248187,1.70219802876894,0.720244376125241,0.129358683782755,1.50035924522115,4.07882537377229,1.07021290561242,3.45552943264454,0,0,0,0,0,0,0.120625849856312,0,0,0,3.8939313422207,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.540026704109006,0.209088296014469,0.218362563746178,0,0.165306911450672,0.26175594198403,0.129614973291793,0,76.6622396610499,0.149516546043979,0.496375471371293,0.583353565032143,0.258319646955462,0.337912250981556,0.704143431874524,0.651021924219751,0.629156066554265,44.9346464736371,74.887801627045,0.316011120628178,0.202725215290164,0.102710957164827,0.25984164595559,0,0.39736270956253,0,0,0,0,0,0,0,0.233753804363138,0,0,0,0,0.386379188064381,0,0.915758121336325,0.214368379079066,0,7.90652579663893,2.76195141904306,2.86447756719698,3.09335728218638,3.42541259885321,6.0431511791176,2.70009000092722,4.05289082901798,4.07828168085784,5.69536342927002,0.31136204275253,0.798049746802062,0.512200817262403,0.729320151204882,0.209613162627982,0.919217542250071,2.22246727801615,1.44224540067226,2.24643446714271,0.758091635291392,3.04175159868288,1.13175804831646,1.96647165686753,1.72867911493147,1.26358031702349,0.952587382566147,1.97003354106254,1.35036454324594,0.824171801606613,1.17759136107518,1.02860775715625,1.24233064311536,1.1921809497366,1.59881058295561,1.88218760830661,0.761531471025089,2.0122077016005,3.15683653725411,1.35804113845862,3.36685362994643,1.18635018124174,1.57607171800902,1.63692417267876,1.54936841185966,2.12197272079256,0.749431733813838,0.701794825336225,1.50409737833809,0,0.220591419119515,0.231867835620421
|phase1_expression=1.60148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9001298953503,0,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.75748946187577,3.30530828426282,0.979904951377538,4.31257693094915,0,0,0,0,0.286533439938757,0,0.606949382578793,1.05798195854407,1.26766280701236,0,0,0,0,0,1.49800055259202,3.45796474789399,0.518448061542388,0,0,0.285650984403804,0.220868540951614,0.244981598429908,0.287536413054709,0,2.20231761998777,2.042997409363,1.38245879930619,0.395658863190582,0.548925861614458,2.08365348222704,0.837548997004143,2.8138130501584,4.27835093775068,2.94628585473668,1.70846016958924,0.372798891650601,0.151452386666368,0.302286240427142,1.44932244350839,0,0,0,0,0,2.66844398250329,0.170430322578058,0,0,1.54927761754349,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,2.39786147410026,0,0.29688427812965,0.173485326766136,0,0,0.150722640552623,0.705532242814229,0.251333182659351,0,0,0,0,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,1.9472783122627,3.20250421973039,1.7591609295801,3.47648640384553,4.34716277461562,2.28566849015516,2.43361894601636,0.916554274652847,1.36847667671102,2.0217820674694,0.631325567659422,0.910843100738926,0.459804208866946,2.34080768746954,2.41127708537144,3.40182495756639,2.8185018462667,1.3118241438362,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0.308534225774757,0,0.536546802799238,0,0.493679549740441,0,0,0,0,0,6.72927835405207,7.51203670368776,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,1.62921062276251,0.387904974335251,0.701358198903186,1.7706230394792,1.03327103585722,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0,0,0.372140947668503,0,0,0,0,8.68339993783042,0,0.651859905768103,0.169745085775188,2.34690248288502,4.85768146581266,3.09456733151818,5.46374214001837,2.99506773801763,2.87904096543407,2.07291199254733,4.42430949732493,3.7990696010497,6.50920763616802,0,0,0,0.275936746304732,1.28440471990234,1.52375192569864,0,0,0,0.780877488593277,0.646270193198397,0.238968797952552,0.668396022247182,0.849229592366497,0.809621403349789,0.292255857911312,0.395287777946524,1.92792789853084,5.10984306749767,0.178065603667255,0.325773918707152,8.74341651754438,0,0,1.209294227859,0.377210159511796,0,0,1.29214146584111,0.363533729477506,1.06949213515416,0,0,1.03135543248187,1.70219802876894,0.720244376125241,0.129358683782755,1.50035924522115,4.07882537377229,1.07021290561242,3.45552943264454,0,0,0,0,0,0,0.120625849856312,0,0,0,3.8939313422207,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.540026704109006,0.209088296014469,0.218362563746178,0,0.165306911450672,0.26175594198403,0.129614973291793,0,76.6622396610499,0.149516546043979,0.496375471371293,0.583353565032143,0.258319646955462,0.337912250981556,0.704143431874524,0.651021924219751,0.629156066554265,44.9346464736371,74.887801627045,0.316011120628178,0.202725215290164,0.102710957164827,0.25984164595559,0,0.39736270956253,0,0,0,0,0,0,0,0.233753804363138,0,0,0,0,0.386379188064381,0,0.915758121336325,0.214368379079066,0,7.90652579663893,2.76195141904306,2.86447756719698,3.09335728218638,3.42541259885321,6.0431511791176,2.70009000092722,4.05289082901798,4.07828168085784,5.69536342927002,0.31136204275253,0.798049746802062,0.512200817262403,0.729320151204882,0.209613162627982,0.919217542250071,2.22246727801615,1.44224540067226,2.24643446714271,0.758091635291392,3.04175159868288,1.13175804831646,1.96647165686753,1.72867911493147,1.26358031702349,0.952587382566147,1.97003354106254,1.35036454324594,0.824171801606613,1.17759136107518,1.02860775715625,1.24233064311536,1.1921809497366,1.59881058295561,1.88218760830661,0.761531471025089,2.0122077016005,3.15683653725411,1.35804113845862,3.36685362994643,1.18635018124174,1.57607171800902,1.63692417267876,1.54936841185966,2.12197272079256,0.749431733813838,0.701794825336225,1.50409737833809,0,0.220591419119515,0.231867835620421
|short_description=p1@Lrriq1
|short_description=p1@Lrriq1
}}
}}

Latest revision as of 13:37, 25 September 2015

Short description:p1@Lrriq1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lrriq1_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 0bp_to_ENSMUST00000020043, ENSMUST00000123364, ENSMUST00000166240, NM_001163559, NM_029134, uc007gyi.1, uc011xmu.1_5end
EntrezGene:Lrriq1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lrriq1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.90
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.40
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C63.40
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G17.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D51.77
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B18.68
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A64.86
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C65.46
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A44.42
lung, neonate N25.CNhs11119.1359-25C73.80
lung, neonate N30.CNhs11133.1394-42H26.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I75.11
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G68.74
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B94.08
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G576.66
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H344.93
testis, neonate N30.CNhs11130.1391-42E274.89
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.77e-1454
central nervous system5.68e-1473
brain8.15e-1447
future brain8.15e-1447
neural tube1.10e-1352
neural rod1.10e-1352
future spinal cord1.10e-1352
neural keel1.10e-1352
pre-chordal neural plate1.21e-1349
neurectoderm1.87e-1364
neural plate1.87e-1364
presumptive neural plate1.87e-1364
regional part of brain2.75e-1346
nervous system3.19e-1375
anterior neural tube9.03e-1340
regional part of forebrain3.07e-1239
forebrain3.07e-1239
future forebrain3.07e-1239
ectoderm-derived structure9.24e-1295
ectoderm9.24e-1295
presumptive ectoderm9.24e-1295
ecto-epithelium1.08e-1173
regional part of cerebral cortex4.13e-1017
occipital lobe5.06e-1010
visual cortex5.06e-1010
neocortex5.06e-1010
brain grey matter5.13e-1029
regional part of telencephalon5.13e-1029
telencephalon5.13e-1029
gray matter1.58e-0934
cerebral cortex1.22e-0821
cerebral hemisphere1.22e-0821
pallium1.22e-0821
tube4.96e-08114
lung1.10e-0714
respiratory tube1.10e-0714
respiration organ1.10e-0714
pair of lungs1.10e-0714
lung primordium1.10e-0714
lung bud1.10e-0714
anatomical conduit1.51e-07122
structure with developmental contribution from neural crest8.74e-0792
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:102698914..102698961,-&oldid=4194047"