Personal tools

FFCP PHASE1:Mm9::chr13:13876545..13876632,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14706
|EntrezGene=14706
|HGNC=
|HGNC=
|MCL_coexpression_id=93
|TSSclassifier=NA
|UniProt=P50153
|UniProt=P50153
|association_with_transcript=0bp_to_ENSMUST00000021734_5end
|association_with_transcript=0bp_to_ENSMUST00000021734_5end
|cluster_id=chr13:13876545..13876632,+
|description=CAGE_peak_1_at_Gng4_5end
|description=CAGE_peak_1_at_Gng4_5end
|id=chr13:13876545..13876632,+
|id=chr13:13876545..13876632,+
|ontology_enrichment_celltype=CL:0000117!2.36e-10!23;CL:0000337!2.36e-10!23;CL:0000540!3.46e-09!33;CL:0000047!3.46e-09!33;CL:0000031!3.46e-09!33;CL:0000404!3.46e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.59e-10,23;CL:0000337,1.59e-10,23;CL:0000540,2.47e-09,33;CL:0000047,2.47e-09,33;CL:0000031,2.47e-09,33;CL:0000404,2.47e-09,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!8.53e-23!102;UBERON:0000924!8.53e-23!102;UBERON:0006601!8.53e-23!102;UBERON:0001017!5.12e-20!73;UBERON:0005743!5.12e-20!73;UBERON:0002346!8.44e-20!71;UBERON:0003075!8.44e-20!71;UBERON:0007284!8.44e-20!71;UBERON:0000073!1.14e-19!75;UBERON:0001016!1.14e-19!75;UBERON:0001049!2.95e-18!52;UBERON:0005068!2.95e-18!52;UBERON:0006241!2.95e-18!52;UBERON:0007135!2.95e-18!52;UBERON:0000955!1.29e-16!50;UBERON:0006238!1.29e-16!50;UBERON:0002616!6.41e-16!49;UBERON:0000033!1.35e-15!63;UBERON:0003080!3.44e-15!40;UBERON:0003056!4.62e-15!49;UBERON:0002780!1.44e-14!39;UBERON:0001890!1.44e-14!39;UBERON:0006240!1.44e-14!39;UBERON:0002020!9.88e-14!34;UBERON:0002791!1.56e-10!29;UBERON:0003528!1.56e-10!29;UBERON:0001893!1.56e-10!29;UBERON:0002021!1.87e-07!10;UBERON:0000411!1.87e-07!10;UBERON:0001950!1.87e-07!10;UBERON:0000153!6.85e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.95e-23,95;UBERON:0000924,1.95e-23,95;UBERON:0006601,1.95e-23,95;UBERON:0001017,1.71e-22,73;UBERON:0001016,8.03e-22,75;UBERON:0000073,3.27e-21,54;UBERON:0001049,4.50e-20,52;UBERON:0005068,4.50e-20,52;UBERON:0006241,4.50e-20,52;UBERON:0007135,4.50e-20,52;UBERON:0002346,1.60e-19,64;UBERON:0003075,1.60e-19,64;UBERON:0007284,1.60e-19,64;UBERON:0010371,4.22e-19,73;UBERON:0000955,1.62e-16,47;UBERON:0006238,1.62e-16,47;UBERON:0003080,4.48e-16,40;UBERON:0002616,9.36e-16,46;UBERON:0002780,2.21e-15,39;UBERON:0001890,2.21e-15,39;UBERON:0006240,2.21e-15,39;UBERON:0003056,3.54e-15,49;UBERON:0002020,6.89e-15,34;UBERON:0003528,2.59e-11,29;UBERON:0002791,2.59e-11,29;UBERON:0001893,2.59e-11,29;UBERON:0010314,9.24e-11,92;UBERON:0002021,3.29e-08,10;UBERON:0000411,3.29e-08,10;UBERON:0001950,3.29e-08,10;UBERON:0002619,1.06e-07,17;UBERON:0000956,7.67e-07,21;UBERON:0001869,7.67e-07,21;UBERON:0000203,7.67e-07,21
|phase1_expression=0,0,0.909998478779072,0,0,2.35030980676646,1.86890112476421,0,0.281577444303333,0.468129052643987,0.856089841127525,0.159544317990673,0,0,0,0,0,0,0,1.27316895539409,4.08207792725135,0,0,0.319984845586813,0.45881856213434,0,0.430761996159075,0.215471232685889,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0.7813353445238,0,0,0,0,0.629484089877886,0.506884656097573,0.183546752161682,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,12.3413041124355,17.4567023159771,17.747279298173,0,0.889294796111139,0,0,0,2.99600110518405,2.68952813725088,0.622137673850866,2.29510095163874,0.841299845405528,36.2776750192831,36.6641777979678,4.04219637409348,2.58782771749238,13.7882817991503,12.1127469099328,9.83192503255945,18.279177457493,11.6059933202571,14.2720724019759,12.5019208933622,20.3803589271008,25.3243174514256,16.1966142643419,34.4715445004191,38.725097177356,24.791126294765,1.8931548333296,0.377857800533928,0,0,0,0,0,0,2.52799956237153,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,1.01104889002957,1.25602267690966,0,7.42210695324124,1.56136794089522,3.04465478312141,2.7673859670727,3.76806601381556,3.99801604261396,2.89033160058254,12.8541383221874,1.01219549843938,0.884610551949874,0.808834249737046,0,0,1.86391761218122,2.04946557908083,1.8850203613211,1.53274233125155,0.359445373517761,0,0.254140454146129,24.2660835835813,10.5225138648284,35.4345272958278,28.1595398711488,15.8543583544805,18.4931359658008,18.9822277789276,0.712875546952214,1.8661045591514,3.28539585963777,1.47309299120532,0.520481771850815,0.919608417733892,1.0803727788321,2.56198190320716,4.150226448231,2.69038812598185,4.96619140166563,4.9153640440413,0.215567992932842,1.13463648100692,1.93546236580344,3.06874025398605,2.50242524303038,12.1888258282758,6.99659263787008,0.796137067273973,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0.154267112887378,0,0.268273401399619,0.467061369468678,0.658239399653922,0.32833492815819,0.243206428637567,0.292399974850665,0.219550115291051,0.939444931322602,11.3556572224629,11.936935035997,1.65209391491899,0.793351699990633,0.213288250535234,1.16118335930219,1.15980715189884,0.605050573870028,1.77902435075896,2.09248188723815,2.84717436926707,1.4822905925161,1.50801125280162,2.18852119245266,2.53453313254856,0,2.59365659849633,1.59313018603494,0.189667900953082,0.571242563048644,0,0.203651327845314,0.581857461502877,0.701358198903186,0.885311519739602,1.03327103585722,0.627994911365499,0.616985819609003,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0,0.169745085775188,0.234690248288502,1.00503754465089,0.238043640886014,1.56106918286239,0.315270288212382,0.221464689648775,0.318909537314974,0.655453258862952,0.345369963731791,0.144649058581512,0,0,0,0,19.1055202085472,18.8710815413447,0,0.757412781613119,1.57754109708128,1.56175497718655,4.95473814785438,0.477937595905104,1.55959071857676,1.41538265394416,2.02405350837447,3.50707029493574,6.32460444714438,196.327324333724,1.56134093729095,3.02711526234334,1.62886959353576,1.31976098378028,1.32745138339963,3.15614827001476,4.23252979750651,3.20628635585027,5.31543407185391,5.53383266299069,5.42699415653264,7.63420831902762,6.06045543254026,2.84433082142234,1.05418608574999,2.06271086496374,51.7468200745758,0.720244376125241,4.2688365648309,4.50107773566344,12.5911565886014,12.8425548673491,15.9612549984057,32.8822145043767,1.87737366450968,0,2.20528398054962,8.57408515295696,7.10443477461984,6.93598636673792,6.08798954415996,6.40149509005739,2.04036585640896,16.3174265769249,0,0.206386867963223,0.185194527369712,0,0,0,1.35982743995084,1.95932033253121,0.967399816630967,0.954670618015114,0.474503990371703,2.03319467126849,1.18805874903981,1.04544148007234,1.31017538247707,1.88810084938749,4.3806331534428,1.30877970992015,1.42576470620972,8.69875038321696,0,0.149516546043979,0.330916980914195,0.388902376688095,0.516639293910924,0.168956125490778,0.234714477291508,0.651021924219751,0,0,0,0,0.202725215290164,0.513554785824136,0.25984164595559,0.179026695667481,0.39736270956253,0.360586348559907,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,2.26730383615211,0,0,0,1.35232715822533,2.064507229963,2.93042598827624,0.857473516316263,0,41.7916363536629,32.2227665555024,38.956894913879,44.5099742270151,17.1270629942661,16.6186657425734,22.9507650078814,16.2115633160719,15.8599843144472,18.1216109113137,0.415149390336707,1.99512436700516,1.36586884603307,4.132814190161,6.49800804146745,7.90527086335061,3.11145418922261,5.97501665992793,5.45562656306086,4.29585259998456,8.36481689637791,5.47016390019621,6.64854703036165,6.59459069770154,6.20303064720623,6.66811167796303,6.37363792696705,6.17309505483856,7.41754621445952,5.88795680537589,4.4573002810104,4.96932257246145,4.76872379894642,5.66851024866081,6.86998477031913,5.24610568928394,5.67076715905595,2.10455769150274,4.6173398707593,3.92799590160417,5.81311588808453,8.0773675547962,4.09231043169689,6.8172210121825,6.36591816237767,12.2407183189594,7.25187986180766,6.44613162144895,3.25190164517034,2.64709702943419,1.15933917810211
|phase1_expression=0,0,0.909998478779072,0,0,2.35030980676646,1.86890112476421,0,0.281577444303333,0.468129052643987,0.856089841127525,0.159544317990673,0,0,0,0,0,0,0,1.27316895539409,4.08207792725135,0,0,0.319984845586813,0.45881856213434,0,0.430761996159075,0.215471232685889,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0.7813353445238,0,0,0,0,0.629484089877886,0.506884656097573,0.183546752161682,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,12.3413041124355,17.4567023159771,17.747279298173,0,0.889294796111139,0,0,0,2.99600110518405,2.68952813725088,0.622137673850866,2.29510095163874,0.841299845405528,36.2776750192831,36.6641777979678,4.04219637409348,2.58782771749238,13.7882817991503,12.1127469099328,9.83192503255945,18.279177457493,11.6059933202571,14.2720724019759,12.5019208933622,20.3803589271008,25.3243174514256,16.1966142643419,34.4715445004191,38.725097177356,24.791126294765,1.8931548333296,0.377857800533928,0,0,0,0,0,0,2.52799956237153,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,1.01104889002957,1.25602267690966,0,7.42210695324124,1.56136794089522,3.04465478312141,2.7673859670727,3.76806601381556,3.99801604261396,2.89033160058254,12.8541383221874,1.01219549843938,0.884610551949874,0.808834249737046,0,0,1.86391761218122,2.04946557908083,1.8850203613211,1.53274233125155,0.359445373517761,0,0.254140454146129,24.2660835835813,10.5225138648284,35.4345272958278,28.1595398711488,15.8543583544805,18.4931359658008,18.9822277789276,0.712875546952214,1.8661045591514,3.28539585963777,1.47309299120532,0.520481771850815,0.919608417733892,1.0803727788321,2.56198190320716,4.150226448231,2.69038812598185,4.96619140166563,4.9153640440413,0.215567992932842,1.13463648100692,1.93546236580344,3.06874025398605,2.50242524303038,12.1888258282758,6.99659263787008,0.796137067273973,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0.154267112887378,0,0.268273401399619,0.467061369468678,0.658239399653922,0.32833492815819,0.243206428637567,0.292399974850665,0.219550115291051,0.939444931322602,11.3556572224629,11.936935035997,1.65209391491899,0.793351699990633,0.213288250535234,1.16118335930219,1.15980715189884,0.605050573870028,1.77902435075896,2.09248188723815,2.84717436926707,1.4822905925161,1.50801125280162,2.18852119245266,2.53453313254856,0,2.59365659849633,1.59313018603494,0.189667900953082,0.571242563048644,0,0.203651327845314,0.581857461502877,0.701358198903186,0.885311519739602,1.03327103585722,0.627994911365499,0.616985819609003,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0,0.169745085775188,0.234690248288502,1.00503754465089,0.238043640886014,1.56106918286239,0.315270288212382,0.221464689648775,0.318909537314974,0.655453258862952,0.345369963731791,0.144649058581512,0,0,0,0,19.1055202085472,18.8710815413447,0,0.757412781613119,1.57754109708128,1.56175497718655,4.95473814785438,0.477937595905104,1.55959071857676,1.41538265394416,2.02405350837447,3.50707029493574,6.32460444714438,196.327324333724,1.56134093729095,3.02711526234334,1.62886959353576,1.31976098378028,1.32745138339963,3.15614827001476,4.23252979750651,3.20628635585027,5.31543407185391,5.53383266299069,5.42699415653264,7.63420831902762,6.06045543254026,2.84433082142234,1.05418608574999,2.06271086496374,51.7468200745758,0.720244376125241,4.2688365648309,4.50107773566344,12.5911565886014,12.8425548673491,15.9612549984057,32.8822145043767,1.87737366450968,0,2.20528398054962,8.57408515295696,7.10443477461984,6.93598636673792,6.08798954415996,6.40149509005739,2.04036585640896,16.3174265769249,0,0.206386867963223,0.185194527369712,0,0,0,1.35982743995084,1.95932033253121,0.967399816630967,0.954670618015114,0.474503990371703,2.03319467126849,1.18805874903981,1.04544148007234,1.31017538247707,1.88810084938749,4.3806331534428,1.30877970992015,1.42576470620972,8.69875038321696,0,0.149516546043979,0.330916980914195,0.388902376688095,0.516639293910924,0.168956125490778,0.234714477291508,0.651021924219751,0,0,0,0,0.202725215290164,0.513554785824136,0.25984164595559,0.179026695667481,0.39736270956253,0.360586348559907,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,2.26730383615211,0,0,0,1.35232715822533,2.064507229963,2.93042598827624,0.857473516316263,0,41.7916363536629,32.2227665555024,38.956894913879,44.5099742270151,17.1270629942661,16.6186657425734,22.9507650078814,16.2115633160719,15.8599843144472,18.1216109113137,0.415149390336707,1.99512436700516,1.36586884603307,4.132814190161,6.49800804146745,7.90527086335061,3.11145418922261,5.97501665992793,5.45562656306086,4.29585259998456,8.36481689637791,5.47016390019621,6.64854703036165,6.59459069770154,6.20303064720623,6.66811167796303,6.37363792696705,6.17309505483856,7.41754621445952,5.88795680537589,4.4573002810104,4.96932257246145,4.76872379894642,5.66851024866081,6.86998477031913,5.24610568928394,5.67076715905595,2.10455769150274,4.6173398707593,3.92799590160417,5.81311588808453,8.0773675547962,4.09231043169689,6.8172210121825,6.36591816237767,12.2407183189594,7.25187986180766,6.44613162144895,3.25190164517034,2.64709702943419,1.15933917810211
|short_description=p1@Gng4
|short_description=p1@Gng4
}}
}}

Latest revision as of 04:38, 27 September 2015

Short description:p1@Gng4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gng4_5end
Coexpression cluster:MCL_coexpression_mm9:93
Association with transcript: 0bp_to_ENSMUST00000021734_5end
EntrezGene:Gng4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gng4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C312.34
Mouse Granule cells, donor2.CNhs12357.11731-123E317.46
Mouse Granule cells, donor3.CNhs12108.11636-122C717.75
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F136.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D536.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.61
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E525.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D634.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F638.73
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.79
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D77.42
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C14.00
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A812.85
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A424.27
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F135.43
cortex, adult.CNhs10473.12-14D528.16
cortex, neonate N30.CNhs11107.1392-42F215.85
diencephalon, adult.CNhs10482.20-12F218.49
diencephalon, neonate N30.CNhs11201.1388-42B218.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C64.15
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G84.97
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C412.19
forelimb, embryo E18.CNhs11008.1520-43B57.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E811.36
hippocampus, neonate N00.CNhs11228.627-43G111.94
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C219.11
medulla oblongata, neonate N30.CNhs11200.1396-42A318.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I9196.33
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F24.23
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D77.63
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G851.75
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C74.27
pituitary gland, embryo E14.CNhs11037.398-44A54.50
pituitary gland, embryo E15.CNhs10592.427-16B912.59
pituitary gland, embryo E16.CNhs11036.449-43F612.84
pituitary gland, embryo E17.CNhs11039.1265-44F515.96
pituitary gland, neonate N00.CNhs11190.1308-22E932.88
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C38.57
skin, neonate N00.CNhs11124.650-25G47.10
skin, neonate N03.CNhs11215.662-22H36.94
skin, neonate N06.CNhs11097.693-20I56.09
skin, neonate N10.CNhs11108.762-6C46.40
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C916.32
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A94.38
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C18.70
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A141.79
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A232.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A338.96
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D744.51
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A516.62
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.95
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.86
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.12
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B16.50
whole body, embryo E16.CNhs10514.453-14F27.91
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.87
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.82
whole body, embryo E17.5.CNhs10513.490-9F96.37
whole body, embryo E17.CNhs10517.475-3I512.24
whole body, embryo E18.CNhs10516.493-3B37.25
whole body, neonate N00.CNhs10525.657-19C26.45
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.59e-1023
neuroblast (sensu Vertebrata)1.59e-1023
neuron2.47e-0933
neuronal stem cell2.47e-0933
neuroblast2.47e-0933
electrically signaling cell2.47e-0933

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.95e-2395
ectoderm1.95e-2395
presumptive ectoderm1.95e-2395
central nervous system1.71e-2273
nervous system8.03e-2275
regional part of nervous system3.27e-2154
neural tube4.50e-2052
neural rod4.50e-2052
future spinal cord4.50e-2052
neural keel4.50e-2052
neurectoderm1.60e-1964
neural plate1.60e-1964
presumptive neural plate1.60e-1964
ecto-epithelium4.22e-1973
brain1.62e-1647
future brain1.62e-1647
anterior neural tube4.48e-1640
regional part of brain9.36e-1646
regional part of forebrain2.21e-1539
forebrain2.21e-1539
future forebrain2.21e-1539
pre-chordal neural plate3.54e-1549
gray matter6.89e-1534
brain grey matter2.59e-1129
regional part of telencephalon2.59e-1129
telencephalon2.59e-1129
structure with developmental contribution from neural crest9.24e-1192
occipital lobe3.29e-0810
visual cortex3.29e-0810
neocortex3.29e-0810
regional part of cerebral cortex1.06e-0717
cerebral cortex7.67e-0721
cerebral hemisphere7.67e-0721
pallium7.67e-0721
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:13876545..13876632,%2B&oldid=4293042"