FFCP PHASE1:Mm9::chr13:105413398..105413412,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=29 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:105413398..105413412,- | |||
|description=CAGE_peak_at_chr13:105413398..105413412,- | |description=CAGE_peak_at_chr13:105413398..105413412,- | ||
|id=chr13:105413398..105413412,- | |id=chr13:105413398..105413412,- | ||
|ontology_enrichment_celltype=CL:0000624!5.74e-29!8;CL:0000084!1.06e-25!11;CL:0000827!1.06e-25!11;CL:0000791!1.29e-25!9;CL:0000789!1.29e-25!9;CL:0002420!1.29e-25!9;CL:0002419!1.29e-25!9;CL:0000790!1.29e-25!9;CL:0000838!1.94e-23!12;CL:0000893!8.52e-22!6;CL:0002489!8.52e-22!6;CL:0000898!8.52e-22!6;CL:0000809!8.52e-22!6;CL:0000810!8.52e-22!6;CL:0000895!8.52e-22!6;CL:0000808!8.52e-22!6;CL:0000894!8.52e-22!6;CL:0000806!8.52e-22!6;CL:0000807!8.52e-22!6;CL:0000805!8.52e-22!6;CL:0002425!8.52e-22!6;CL:0002436!8.52e-22!6;CL:0002427!8.52e-22!6;CL:0002428!8.52e-22!6;CL:0002429!8.52e-22!6;CL:0002433!8.52e-22!6;CL:0002431!8.52e-22!6;CL:0002432!8.52e-22!6;CL:0000542!1.61e-21!13;CL:0000051!1.61e-21!13;CL:0000738!4.21e-16!17;CL:0002087!4.21e-16!17;CL:0002031!5.52e-13!25;CL:0000988!7.60e-12!32;CL:0002032!7.60e-12!32;CL:0000037!7.60e-12!32;CL:0000566!7.60e-12!32;CL:0000837!7.60e-12!32;CL:0002320!1.28e-07!46;CL:0000134!1.28e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.89e-25,8;CL:0000815,3.06e-23,1;CL:0000792,3.06e-23,1;CL:0000791,1.40e-22,9;CL:0000789,1.40e-22,9;CL:0002420,1.40e-22,9;CL:0002419,1.40e-22,9;CL:0000790,1.40e-22,9;CL:0000084,1.15e-18,11;CL:0000827,1.15e-18,11;CL:0000838,3.40e-17,12;CL:0000542,5.98e-16,13;CL:0000051,5.98e-16,13;CL:0000738,2.01e-12,17;CL:0002087,2.01e-12,17;CL:0002031,9.87e-09,25;CL:0000988,5.32e-07,32;CL:0002032,5.32e-07,32;CL:0000037,5.32e-07,32;CL:0000837,5.32e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!6.78e-40!23;UBERON:0000974!6.78e-40!23;UBERON:0004807!6.78e-40!23;UBERON:0005058!6.78e-40!23;UBERON:0003351!6.78e-40!23;UBERON:0009113!6.78e-40!23;UBERON:0003295!6.78e-40!23;UBERON:0009722!6.78e-40!23;UBERON:0005562!6.78e-40!23;UBERON:0007690!6.78e-40!23;UBERON:0004177!2.76e-39!29;UBERON:0006562!4.23e-38!24;UBERON:0003408!4.23e-38!24;UBERON:0001557!4.23e-38!24;UBERON:0001042!4.23e-38!24;UBERON:0008814!4.23e-38!24;UBERON:0009145!4.23e-38!24;UBERON:0000072!1.64e-33!27;UBERON:0002193!4.09e-28!48;UBERON:0002390!5.10e-27!45;UBERON:0003061!5.10e-27!45;UBERON:0000063!4.10e-25!35;UBERON:0000065!1.09e-23!41;UBERON:0001004!4.82e-23!42;UBERON:0005057!8.35e-21!51;UBERON:0002405!4.61e-18!70;UBERON:0003929!8.62e-15!55;UBERON:0003081!1.46e-13!88;UBERON:0002368!2.77e-13!60;UBERON:0005911!1.13e-12!69;UBERON:0002530!5.23e-12!65;UBERON:0000490!8.91e-12!66;UBERON:0001041!3.26e-11!92;UBERON:0000949!1.61e-10!72;UBERON:0000077!1.94e-10!97;UBERON:0000064!3.01e-10!99;UBERON:0000153!1.82e-08!94;UBERON:0007811!2.85e-08!86;UBERON:0002384!1.28e-07!46;UBERON:0004921!3.77e-07!126;UBERON:0004185!3.77e-07!126;UBERON:0001007!5.60e-07!128;UBERON:0001555!5.60e-07!128;UBERON:0007026!5.60e-07!128;UBERON:0004119!8.22e-07!130;UBERON:0000925!8.22e-07!130;UBERON:0006595!8.22e-07!130;UBERON:0003104!9.91e-07!131;UBERON:0009142!9.91e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,8.39e-23,1;UBERON:0001097,8.39e-23,1;UBERON:0003968,8.39e-23,1;UBERON:0001467,8.39e-23,1;UBERON:0002465,1.59e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,12.0084690800666,0.703943610758334,0.468129052643987,1.19852577757853,0.717949430958028,0.342401459862411,0.34968160967599,0,0,0,0,0,0.42438965179803,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0.384847366561318,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,12.0084690800666,0.703943610758334,0.468129052643987,1.19852577757853,0.717949430958028,0.342401459862411,0.34968160967599,0,0,0,0,0,0.42438965179803,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0.384847366561318,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:105413398..105413412,- | |short_description=p@chr13:105413398..105413412,- | ||
}} | }} |
Latest revision as of 13:42, 5 August 2015
Short description: | p@chr13:105413398..105413412, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:105413398..105413412, - |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.89e-25 | 8 |
regulatory T cell | 3.06e-23 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.06e-23 | 1 |
mature alpha-beta T cell | 1.40e-22 | 9 |
alpha-beta T cell | 1.40e-22 | 9 |
immature T cell | 1.40e-22 | 9 |
mature T cell | 1.40e-22 | 9 |
immature alpha-beta T cell | 1.40e-22 | 9 |
T cell | 1.15e-18 | 11 |
pro-T cell | 1.15e-18 | 11 |
lymphoid lineage restricted progenitor cell | 3.40e-17 | 12 |
lymphocyte | 5.98e-16 | 13 |
common lymphoid progenitor | 5.98e-16 | 13 |
leukocyte | 2.01e-12 | 17 |
nongranular leukocyte | 2.01e-12 | 17 |
hematopoietic lineage restricted progenitor cell | 9.87e-09 | 25 |
hematopoietic cell | 5.32e-07 | 32 |
hematopoietic oligopotent progenitor cell | 5.32e-07 | 32 |
hematopoietic stem cell | 5.32e-07 | 32 |
hematopoietic multipotent progenitor cell | 5.32e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lymph node | 8.39e-23 | 1 |
axillary lymph node | 8.39e-23 | 1 |
peripheral lymph node | 8.39e-23 | 1 |
shoulder | 8.39e-23 | 1 |
lymphoid system | 1.59e-08 | 3 |