FFCP PHASE1:Mm9::chr12:81564152..81564166,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=97827 | |EntrezGene=97827 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=F8WID1,Q3TPJ5,Q3TS84 | |UniProt=F8WID1,Q3TPJ5,Q3TS84 | ||
|association_with_transcript=70bp_to_ENSMUST00000038185,NM_133798,uc007oas.2_5end | |association_with_transcript=70bp_to_ENSMUST00000038185,NM_133798,uc007oas.2_5end | ||
|cluster_id=chr12:81564152..81564166,+ | |||
|description=CAGE_peak_3_at_Exd2_5end | |description=CAGE_peak_3_at_Exd2_5end | ||
|id=chr12:81564152..81564166,+ | |id=chr12:81564152..81564166,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!7.78e-10!49;UBERON:0000033!1.12e-09!63;UBERON:0000153!1.16e-09!94;UBERON:0007811!4.35e-09!86;UBERON:0002791!5.00e-09!29;UBERON:0003528!5.00e-09!29;UBERON:0001893!5.00e-09!29;UBERON:0000956!6.78e-09!21;UBERON:0001869!6.78e-09!21;UBERON:0000203!6.78e-09!21;UBERON:0003080!4.27e-08!40;UBERON:0002780!7.65e-08!39;UBERON:0001890!7.65e-08!39;UBERON:0006240!7.65e-08!39;UBERON:0002020!1.14e-07!34;UBERON:0002619!1.63e-07!17;UBERON:0000955!2.06e-07!50;UBERON:0006238!2.06e-07!50;UBERON:0002021!4.93e-07!10;UBERON:0000411!4.93e-07!10;UBERON:0001950!4.93e-07!10;UBERON:0002616!5.08e-07!49;UBERON:0002050!5.55e-07!317;UBERON:0005423!5.55e-07!317;UBERON:0002346!9.98e-07!71;UBERON:0003075!9.98e-07!71;UBERON:0007284!9.98e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.02e-10,49;UBERON:0000956,1.76e-09,21;UBERON:0001869,1.76e-09,21;UBERON:0000203,1.76e-09,21;UBERON:0003528,1.79e-09,29;UBERON:0002791,1.79e-09,29;UBERON:0001893,1.79e-09,29;UBERON:0000955,4.93e-09,47;UBERON:0006238,4.93e-09,47;UBERON:0003080,9.46e-09,40;UBERON:0002346,1.36e-08,64;UBERON:0003075,1.36e-08,64;UBERON:0007284,1.36e-08,64;UBERON:0002616,1.48e-08,46;UBERON:0002780,1.85e-08,39;UBERON:0001890,1.85e-08,39;UBERON:0006240,1.85e-08,39;UBERON:0010371,3.27e-08,73;UBERON:0002020,3.58e-08,34;UBERON:0004121,5.54e-08,95;UBERON:0000924,5.54e-08,95;UBERON:0006601,5.54e-08,95;UBERON:0002021,5.90e-08,10;UBERON:0000411,5.90e-08,10;UBERON:0001950,5.90e-08,10;UBERON:0002619,7.09e-08,17;UBERON:0001049,2.29e-07,52;UBERON:0005068,2.29e-07,52;UBERON:0006241,2.29e-07,52;UBERON:0007135,2.29e-07,52;UBERON:0000073,6.02e-07,54 | |||
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| ||
|short_description=p3@Exd2 | |short_description=p3@Exd2 | ||
}} | }} |
Latest revision as of 21:00, 26 September 2015
Short description: | p3@Exd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Exd2_5end |
Coexpression cluster: | NA |
Association with transcript: | 70bp_to_ENSMUST00000038185, NM_133798, uc007oas.2_5end |
EntrezGene: | Exd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 1.02e-10 | 49 |
cerebral cortex | 1.76e-09 | 21 |
cerebral hemisphere | 1.76e-09 | 21 |
pallium | 1.76e-09 | 21 |
brain grey matter | 1.79e-09 | 29 |
regional part of telencephalon | 1.79e-09 | 29 |
telencephalon | 1.79e-09 | 29 |
brain | 4.93e-09 | 47 |
future brain | 4.93e-09 | 47 |
anterior neural tube | 9.46e-09 | 40 |
neurectoderm | 1.36e-08 | 64 |
neural plate | 1.36e-08 | 64 |
presumptive neural plate | 1.36e-08 | 64 |
regional part of brain | 1.48e-08 | 46 |
regional part of forebrain | 1.85e-08 | 39 |
forebrain | 1.85e-08 | 39 |
future forebrain | 1.85e-08 | 39 |
ecto-epithelium | 3.27e-08 | 73 |
gray matter | 3.58e-08 | 34 |
ectoderm-derived structure | 5.54e-08 | 95 |
ectoderm | 5.54e-08 | 95 |
presumptive ectoderm | 5.54e-08 | 95 |
occipital lobe | 5.90e-08 | 10 |
visual cortex | 5.90e-08 | 10 |
neocortex | 5.90e-08 | 10 |
regional part of cerebral cortex | 7.09e-08 | 17 |
neural tube | 2.29e-07 | 52 |
neural rod | 2.29e-07 | 52 |
future spinal cord | 2.29e-07 | 52 |
neural keel | 2.29e-07 | 52 |
regional part of nervous system | 6.02e-07 | 54 |