Personal tools

FFCP PHASE1:Mm9::chr12:72117645..72117677,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=238247
|EntrezGene=238247
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8BY40,Q05CI2
|UniProt=Q8BY40,Q05CI2
|association_with_transcript=-17bp_to_ENSMUST00000125125,uc007nue.1_5end
|association_with_transcript=-17bp_to_ENSMUST00000125125,uc007nue.1_5end
|cluster_id=chr12:72117645..72117677,+
|description=CAGE_peak_3_at_Arid4a_5end
|description=CAGE_peak_3_at_Arid4a_5end
|id=chr12:72117645..72117677,+
|id=chr12:72117645..72117677,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!5.17e-10!193;UBERON:0004120!5.17e-10!193;UBERON:0006603!5.17e-10!193
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.13e-09,120;UBERON:0004120,1.13e-09,120;UBERON:0006603,1.13e-09,120
|phase1_expression=3.36312578920067,0.697950815278722,0.454999239389536,0,0,1.00727563147134,1.63528848416868,5.93967287831251,2.111830832275,2.80877431586392,0.171217968225505,0.239316476986009,3.25281386869291,6.11942816932982,2.33176833270964,1.82227740650843,2.09868563438444,5.36285681109004,4.11343300817216,5.51706547337439,1.36069264241712,2.6808556824239,1.04479915655574,1.75991665072747,0.91763712426868,0.57423196411502,0.86152399231815,1.29282739611533,0.190023419456374,0.756090389279792,0.665191531965914,0,0,0,0.577703239502549,0.166234645358492,0.816677425049476,3.34825304589526,0.7813353445238,2.61761871986899,2.35292595212406,2.04913645487534,2.42755176515577,0.629484089877886,0.811015449756117,1.28482726513177,1.56478268869608,0,0,0.194429899074283,0,0,3.6912173332702,4.35217285206807,9.07453257684653,0.514518872071894,0.573066879877513,3.6097046459421,0,0,0.633831403506179,0.338844532069132,0,0.449949858640699,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,0,0,0.0958454710182364,0.919218786610021,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0,0,0.30559649555362,0.589257170947335,0.427115042397309,0.186399445825301,0.302904773332736,0.0755715601067855,5.50742528533188,1.72084775396277,0.679971333707751,0,0,1.34408066129201,0.561777680527007,0.681721290312231,0.519572009205738,1.06001872353102,2.11265129665021,2.56652954828636,0,0,0.216491041011214,0,0,1.1418387971906,9.32176381129818,2.67195850316685,0.693941307064543,0.913396434936424,1.38369298353635,0.452167921657868,4.46837087115678,1.50799909595611,2.71914464507811,2.16899035379867,3.5384422077995,2.10296904931632,2.20841518460394,0.969750506270444,0,0.292780797011547,0.209446706813455,0.255457055208591,3.95389910869537,1.19980546198682,3.04968544975355,0.299581278809645,0.915001205637253,0.125654352112864,0,0.255715457330331,0.62336413367868,0.162241263067758,2.44414473240759,1.36847667671102,1.26361379216837,0.420883711772948,0.520481771850815,0.459804208866946,1.44049703844279,0.90422890701429,1.76894897793452,0.768682321709099,0.468508622798644,0.776110112217047,0,0.567318240503458,1.40760899331159,0.43839146485515,3.33656699070717,1.74126083261083,2.88094990971121,1.59227413454795,0.702213187313235,2.57347907114715,0.852490498186778,0.621377317606506,1.40715635988658,0.720248245844059,2.13070262026689,1.37734962223183,0.925602677324269,1.86027155800326,1.87791380979733,2.6856028744449,1.81015834904829,3.447516745661,3.08061476274252,2.33919979880532,1.97595103761946,1.47627060636409,0.210289948564127,0.308713837137853,0,1.05780226665418,2.13288250535234,0.928946687441754,1.15980715189884,1.00841762311671,1.11189021922435,0.760902504450237,0.474529061544512,0.164698954724011,2.76468729680296,2.98434708061726,2.72949721966768,0,1.29682829924817,1.59313018603494,0.569003702859245,1.25673363870702,0,1.4255592949172,2.13347735884388,2.59502533594179,4.11037491307672,2.80459281161244,1.8839847340965,1.72756029490521,0.592905254174298,0.166845105716094,0.196558995113203,0.899448449539415,0.405720242777006,0.964708639009667,1.2731292589071,0.863088412352432,0.972811360650212,1.92192989231657,2.87536413054709,2.60498663367952,0.936113019343682,1.01031551178845,0.717589654087649,2.41221760681684,4.43407656399851,0.37898282354097,0.977789858652155,1.35796068620151,0.469380496577004,0.837531287209079,1.42826184531608,3.70753930929818,2.83743259391144,1.10732344824387,4.30527875375215,3.76885623846197,3.45369963731791,2.4590339958857,3.01582567878545,1.63171705145613,1.96705709207614,5.51873492609465,0.481651769963376,0.820481806145422,0.327869890753351,0.757412781613119,0.631016438832513,0,0.215423397732799,0.238968797952552,0.445597348164788,1.69845918473299,0.404810701674894,0,0.395287777946524,0.642642632843614,3.26462195979018,1.6025904330053,2.93196526836437,2.96946221350564,0,0,0.604647113929502,0.565815239267694,0,2.45948118355142,1.03371317267288,2.90826983582004,0.712994756769443,1.58018378967908,3.16255825724996,0,1.02131881726136,0.540183282093931,0.517434735131018,1.71469628025274,1.06404140185364,1.07021290561242,2.79733335023606,0.304464949114599,1.40803024838226,0.63549621259146,0.220528398054962,2.80306630000516,5.48979050766079,1.74907482291652,1.43246812803764,2.62625439592098,2.33184669303881,1.48340241608408,2.05045056957423,1.65109494370578,1.11116716421827,2.44878994106098,3.14396723758358,2.51655990527175,8.49892149969276,10.4963589242744,10.2267980615274,1.90934123603023,0.632671987162271,0.813277868507395,1.18805874903981,1.46361807210128,1.52853794622324,2.15782954215713,1.81837602595739,0.26175594198403,0.777689839750757,0.621339313086926,1.69107881605257,0.747582730219894,0,0.388902376688095,0.258319646955462,1.85851738039856,3.0512882047896,3.51551839078665,4.92838918800841,4.1069300540421,2.01621004380506,3.16011120628178,1.01362607645082,1.84879722896689,1.55904987573354,0.895133478337407,0.39736270956253,1.80293174279953,1.47689527174577,1.41353029927407,1.82896335972,3.02478555410522,2.92373642219257,2.69393156592922,3.50630706544707,1.13365191807606,0.221985953374065,0.448569283047378,0.167884616364078,2.51146472241848,2.064507229963,3.6630324853453,1.50057865355346,1.50471631210609,0,0,0.572895513439397,0,0,0,0.675022500231806,0,0,1.03552062350364,0.207574695168353,0.798049746802062,0.682934423016537,1.70174701947806,1.25767897576789,1.10306105070008,1.11123363900808,1.23621034343337,1.60459604795908,1.26348605881899,2.02783439912192,0.377252682772152,1.68554713445788,1.40855335290712,1.09127391015665,0.952587382566147,2.0859178670074,1.73618298417335,0.824171801606613,0.883193520806384,0.685738504770831,1.59728225543404,1.43061713968393,1.45346416632329,0.941093804153306,1.18460451048347,1.64635175585495,1.31534855718921,0.814824683075171,1.12228454331548,1.54225523561426,1.87158516513571,2.04615521584845,0.77468420592983,1.15743966588685,0.249810577937946,2.10538447600868,3.00819475667618,2.10417165275728,1.10295709559758,0.695603506861264
|phase1_expression=3.36312578920067,0.697950815278722,0.454999239389536,0,0,1.00727563147134,1.63528848416868,5.93967287831251,2.111830832275,2.80877431586392,0.171217968225505,0.239316476986009,3.25281386869291,6.11942816932982,2.33176833270964,1.82227740650843,2.09868563438444,5.36285681109004,4.11343300817216,5.51706547337439,1.36069264241712,2.6808556824239,1.04479915655574,1.75991665072747,0.91763712426868,0.57423196411502,0.86152399231815,1.29282739611533,0.190023419456374,0.756090389279792,0.665191531965914,0,0,0,0.577703239502549,0.166234645358492,0.816677425049476,3.34825304589526,0.7813353445238,2.61761871986899,2.35292595212406,2.04913645487534,2.42755176515577,0.629484089877886,0.811015449756117,1.28482726513177,1.56478268869608,0,0,0.194429899074283,0,0,3.6912173332702,4.35217285206807,9.07453257684653,0.514518872071894,0.573066879877513,3.6097046459421,0,0,0.633831403506179,0.338844532069132,0,0.449949858640699,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,0,0,0.0958454710182364,0.919218786610021,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0,0,0.30559649555362,0.589257170947335,0.427115042397309,0.186399445825301,0.302904773332736,0.0755715601067855,5.50742528533188,1.72084775396277,0.679971333707751,0,0,1.34408066129201,0.561777680527007,0.681721290312231,0.519572009205738,1.06001872353102,2.11265129665021,2.56652954828636,0,0,0.216491041011214,0,0,1.1418387971906,9.32176381129818,2.67195850316685,0.693941307064543,0.913396434936424,1.38369298353635,0.452167921657868,4.46837087115678,1.50799909595611,2.71914464507811,2.16899035379867,3.5384422077995,2.10296904931632,2.20841518460394,0.969750506270444,0,0.292780797011547,0.209446706813455,0.255457055208591,3.95389910869537,1.19980546198682,3.04968544975355,0.299581278809645,0.915001205637253,0.125654352112864,0,0.255715457330331,0.62336413367868,0.162241263067758,2.44414473240759,1.36847667671102,1.26361379216837,0.420883711772948,0.520481771850815,0.459804208866946,1.44049703844279,0.90422890701429,1.76894897793452,0.768682321709099,0.468508622798644,0.776110112217047,0,0.567318240503458,1.40760899331159,0.43839146485515,3.33656699070717,1.74126083261083,2.88094990971121,1.59227413454795,0.702213187313235,2.57347907114715,0.852490498186778,0.621377317606506,1.40715635988658,0.720248245844059,2.13070262026689,1.37734962223183,0.925602677324269,1.86027155800326,1.87791380979733,2.6856028744449,1.81015834904829,3.447516745661,3.08061476274252,2.33919979880532,1.97595103761946,1.47627060636409,0.210289948564127,0.308713837137853,0,1.05780226665418,2.13288250535234,0.928946687441754,1.15980715189884,1.00841762311671,1.11189021922435,0.760902504450237,0.474529061544512,0.164698954724011,2.76468729680296,2.98434708061726,2.72949721966768,0,1.29682829924817,1.59313018603494,0.569003702859245,1.25673363870702,0,1.4255592949172,2.13347735884388,2.59502533594179,4.11037491307672,2.80459281161244,1.8839847340965,1.72756029490521,0.592905254174298,0.166845105716094,0.196558995113203,0.899448449539415,0.405720242777006,0.964708639009667,1.2731292589071,0.863088412352432,0.972811360650212,1.92192989231657,2.87536413054709,2.60498663367952,0.936113019343682,1.01031551178845,0.717589654087649,2.41221760681684,4.43407656399851,0.37898282354097,0.977789858652155,1.35796068620151,0.469380496577004,0.837531287209079,1.42826184531608,3.70753930929818,2.83743259391144,1.10732344824387,4.30527875375215,3.76885623846197,3.45369963731791,2.4590339958857,3.01582567878545,1.63171705145613,1.96705709207614,5.51873492609465,0.481651769963376,0.820481806145422,0.327869890753351,0.757412781613119,0.631016438832513,0,0.215423397732799,0.238968797952552,0.445597348164788,1.69845918473299,0.404810701674894,0,0.395287777946524,0.642642632843614,3.26462195979018,1.6025904330053,2.93196526836437,2.96946221350564,0,0,0.604647113929502,0.565815239267694,0,2.45948118355142,1.03371317267288,2.90826983582004,0.712994756769443,1.58018378967908,3.16255825724996,0,1.02131881726136,0.540183282093931,0.517434735131018,1.71469628025274,1.06404140185364,1.07021290561242,2.79733335023606,0.304464949114599,1.40803024838226,0.63549621259146,0.220528398054962,2.80306630000516,5.48979050766079,1.74907482291652,1.43246812803764,2.62625439592098,2.33184669303881,1.48340241608408,2.05045056957423,1.65109494370578,1.11116716421827,2.44878994106098,3.14396723758358,2.51655990527175,8.49892149969276,10.4963589242744,10.2267980615274,1.90934123603023,0.632671987162271,0.813277868507395,1.18805874903981,1.46361807210128,1.52853794622324,2.15782954215713,1.81837602595739,0.26175594198403,0.777689839750757,0.621339313086926,1.69107881605257,0.747582730219894,0,0.388902376688095,0.258319646955462,1.85851738039856,3.0512882047896,3.51551839078665,4.92838918800841,4.1069300540421,2.01621004380506,3.16011120628178,1.01362607645082,1.84879722896689,1.55904987573354,0.895133478337407,0.39736270956253,1.80293174279953,1.47689527174577,1.41353029927407,1.82896335972,3.02478555410522,2.92373642219257,2.69393156592922,3.50630706544707,1.13365191807606,0.221985953374065,0.448569283047378,0.167884616364078,2.51146472241848,2.064507229963,3.6630324853453,1.50057865355346,1.50471631210609,0,0,0.572895513439397,0,0,0,0.675022500231806,0,0,1.03552062350364,0.207574695168353,0.798049746802062,0.682934423016537,1.70174701947806,1.25767897576789,1.10306105070008,1.11123363900808,1.23621034343337,1.60459604795908,1.26348605881899,2.02783439912192,0.377252682772152,1.68554713445788,1.40855335290712,1.09127391015665,0.952587382566147,2.0859178670074,1.73618298417335,0.824171801606613,0.883193520806384,0.685738504770831,1.59728225543404,1.43061713968393,1.45346416632329,0.941093804153306,1.18460451048347,1.64635175585495,1.31534855718921,0.814824683075171,1.12228454331548,1.54225523561426,1.87158516513571,2.04615521584845,0.77468420592983,1.15743966588685,0.249810577937946,2.10538447600868,3.00819475667618,2.10417165275728,1.10295709559758,0.695603506861264
|short_description=p3@Arid4a
|short_description=p3@Arid4a
}}
}}

Latest revision as of 18:01, 26 September 2015

Short description:p3@Arid4a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Arid4a_5end
Coexpression cluster:NA
Association with transcript: -17bp_to_ENSMUST00000125125, uc007nue.1_5end
EntrezGene:Arid4a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Arid4a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.12
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.36
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.69
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H99.32
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C14.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.77
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E32.69
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G13.45
heart, neonate N16.CNhs11209.782-15G13.08
heart, neonate N20.CNhs11127.821-26I62.34
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A52.73
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G72.60
kidney, neonate N10.CNhs11206.758-6D54.11
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E64.31
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H25.52
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I73.26
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G45.49
skin, neonate N03.CNhs11215.662-22H31.75
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H13.14
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.23
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I43.52
testis, neonate N10.CNhs11204.763-44D94.93
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.85
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D31.83
thymus, neonate N10.CNhs11194.748-24E43.02
thymus, neonate N20.CNhs11186.820-7A22.92
thymus, neonate N25.CNhs11125.1362-25G72.69
thymus, neonate N30.CNhs11132.1393-42G23.51
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E53.66
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
mesoderm1.13e-09120
mesoderm-derived structure1.13e-09120
presumptive mesoderm1.13e-09120
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:72117645..72117677,%2B&oldid=4266815"