FFCP PHASE1:Mm9::chr12:71448287..71448347,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=94090 | |EntrezGene=94090 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C7M3,E9QLH4,E9Q524,Q3TR28 | |UniProt=Q8C7M3,E9QLH4,E9Q524,Q3TR28 | ||
|association_with_transcript=253bp_to_ENSMUST00000081485,ENSMUST00000110520,ENSMUST00000110522,ENSMUST00000167755,NM_001110202,NM_001110203,NM_053167,uc007nto.2,uc007ntp.2,uc007ntq.2,uc007ntr.2,uc007nts.2,uc011ynj.1,uc011ynk.1,uc011ynl.1_5end | |association_with_transcript=253bp_to_ENSMUST00000081485,ENSMUST00000110520,ENSMUST00000110522,ENSMUST00000167755,NM_001110202,NM_001110203,NM_053167,uc007nto.2,uc007ntp.2,uc007ntq.2,uc007ntr.2,uc007nts.2,uc011ynj.1,uc011ynk.1,uc011ynl.1_5end | ||
|cluster_id=chr12:71448287..71448347,- | |||
|description=CAGE_peak_1_at_Trim9_5end | |description=CAGE_peak_1_at_Trim9_5end | ||
|id=chr12:71448287..71448347,- | |id=chr12:71448287..71448347,- | ||
|ontology_enrichment_celltype=CL:0000221!1.12e-17!44;CL:0000133!1.12e-17!44;CL:0002319!1.24e-17!43;CL:0000540!2.52e-14!33;CL:0000047!2.52e-14!33;CL:0000031!2.52e-14!33;CL:0000404!2.52e-14!33;CL:0000117!4.97e-13!23;CL:0000337!4.97e-13!23;CL:0000055!2.15e-12!50;CL:0000393!6.75e-10!39;CL:0000211!6.75e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.04e-20,44;CL:0000133,2.04e-20,44;CL:0002319,2.31e-20,43;CL:0000540,1.72e-16,33;CL:0000047,1.72e-16,33;CL:0000031,1.72e-16,33;CL:0000404,1.72e-16,33;CL:0000117,5.63e-15,23;CL:0000337,5.63e-15,23;CL:0000393,8.72e-12,39;CL:0000211,8.72e-12,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!6.78e-36!102;UBERON:0000924!6.78e-36!102;UBERON:0006601!6.78e-36!102;UBERON:0001017!8.32e-36!73;UBERON:0005743!8.32e-36!73;UBERON:0000073!1.00e-35!75;UBERON:0001016!1.00e-35!75;UBERON:0002346!7.34e-30!71;UBERON:0003075!7.34e-30!71;UBERON:0007284!7.34e-30!71;UBERON:0000033!4.59e-27!63;UBERON:0001049!8.87e-27!52;UBERON:0005068!8.87e-27!52;UBERON:0006241!8.87e-27!52;UBERON:0007135!8.87e-27!52;UBERON:0000955!1.91e-25!50;UBERON:0006238!1.91e-25!50;UBERON:0002616!1.17e-24!49;UBERON:0003056!1.22e-22!49;UBERON:0002020!9.73e-21!34;UBERON:0003080!1.26e-19!40;UBERON:0002780!4.54e-19!39;UBERON:0001890!4.54e-19!39;UBERON:0006240!4.54e-19!39;UBERON:0002791!1.98e-17!29;UBERON:0003528!1.98e-17!29;UBERON:0001893!1.98e-17!29;UBERON:0000956!4.34e-13!21;UBERON:0001869!4.34e-13!21;UBERON:0000203!4.34e-13!21;UBERON:0007811!7.99e-12!86;UBERON:0002619!3.07e-11!17;UBERON:0000153!1.62e-10!94;UBERON:0002021!2.12e-08!10;UBERON:0000411!2.12e-08!10;UBERON:0001950!2.12e-08!10;UBERON:0003076!1.18e-07!12;UBERON:0003057!1.18e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.18e-41,73;UBERON:0001016,1.46e-41,75;UBERON:0004121,5.43e-39,95;UBERON:0000924,5.43e-39,95;UBERON:0006601,5.43e-39,95;UBERON:0002346,1.73e-35,64;UBERON:0003075,1.73e-35,64;UBERON:0007284,1.73e-35,64;UBERON:0000073,9.69e-33,54;UBERON:0001049,4.47e-31,52;UBERON:0005068,4.47e-31,52;UBERON:0006241,4.47e-31,52;UBERON:0007135,4.47e-31,52;UBERON:0010371,6.39e-31,73;UBERON:0000955,3.59e-27,47;UBERON:0006238,3.59e-27,47;UBERON:0002616,2.89e-26,46;UBERON:0003056,3.15e-26,49;UBERON:0002020,5.33e-24,34;UBERON:0003080,1.07e-22,40;UBERON:0002780,4.81e-22,39;UBERON:0001890,4.81e-22,39;UBERON:0006240,4.81e-22,39;UBERON:0010314,1.75e-21,92;UBERON:0003528,3.99e-20,29;UBERON:0002791,3.99e-20,29;UBERON:0001893,3.99e-20,29;UBERON:0000956,4.81e-15,21;UBERON:0001869,4.81e-15,21;UBERON:0000203,4.81e-15,21;UBERON:0002619,7.02e-13,17;UBERON:0002021,1.46e-09,10;UBERON:0000411,1.46e-09,10;UBERON:0001950,1.46e-09,10;UBERON:0003076,1.09e-08,12;UBERON:0003057,1.09e-08,12 | |||
|phase1_expression=3.20297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,26.1082900763784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,3.12956537739216,61.7011192556664,30.9757517655605,25.0814569805826,31.0769856008305,73.3138078261355,0.167782606057736,0,0,0,0,0,42.2841403196559,51.3121249893872,50.0726808769882,3.72728985276045,3.55717918444456,0.449949858640699,0.988866362566974,0.7104801149461,23.3688086204356,29.9690278150813,27.1666784248211,27.0011876663381,18.5085965989216,181.102724112011,129.649833538597,20.9459266657571,19.8400125007749,14.7075005857603,103.508928139425,105.980490610706,83.4083475581402,52.8864013798077,46.9331611680362,47.4031167206652,79.2879717163922,69.7825636439283,82.052659056147,149.37669283515,130.697202973577,65.4262054846805,1.06016670666458,3.24957708459178,0,0,0,0.539703191637817,0,0,5.05599912474307,0,0,0,3.52108549441701,0,0,0,0,0,0,2.2836775943812,0,1.33597925158342,1.04091196059682,1.82679286987285,2.7673859670727,1.3565037649736,3.52766121407114,0.376999773989026,0,0.144599356919912,0,0.323533699894818,0.441683036920787,0.484875253135222,0,93.3970742466835,120.64130312455,0,0,0,0,60.6652089589532,87.8401157411763,57.2983845634662,147.40302352305,162.12359994743,89.1410711160513,108.701646255398,2.74966282395854,0.995255764880744,1.76905930903572,10.5220927943237,2.86264974517948,5.0578462975364,10.803727788321,8.89158425230719,25.3776141834453,25.2384028961154,29.6097449608743,26.6464471861186,0.431135985865684,0.189106080167819,0.175951124163949,0.43839146485515,1.11218899690239,0.348252166522167,0.823128545631774,0.59710280045548,0,0,0,0.207125772535502,0.469052119962192,0,0,0,0.154267112887378,0.232533944750408,0.268273401399619,1.05088808130453,0,0,0.405344047729279,0,0,0,124.701939498527,33.1352851861296,0,0.264450566663544,1.2797295032114,0.464473343720877,0.644337306610467,0.605050573870028,0.667134131534611,0.760902504450237,0.474529061544512,1.15289268306808,0.502670417600539,0.994782360205754,0.974820435595601,0,0.648414149624083,0.597423819763102,0.189667900953082,0.799739588268102,0,1.01825663922657,1.16371492300575,1.05203729835478,0.252946148497029,0,0.156998727841375,0,0,0,0,0,0,0,0.50925170356284,0.863088412352432,0.162135226775035,0,0,0,0,0,0,0,0,0.568474235311454,0.651859905768103,0.169745085775188,0.234690248288502,0.502518772325447,0.238043640886014,1.17080188714679,0,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0.491764273019036,0.827810238914197,65.5046407150191,66.5762379843714,0,0.252470927204373,4.73262329124385,3.90438744296638,8.18608911384636,2.86762557543062,5.34716817797746,4.24614796183249,8.09621403349789,14.3205370376543,16.602086673754,215.606603319033,2.2710413633323,0.178065603667255,1.14020871547503,1.31976098378028,0,0.971122544619926,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,1.03135543248187,15.6602218646742,2.70091641046965,2.06973894052407,3.42939256050548,5.67488747655275,3.38900753443934,4.77192159746151,6.69822888052118,0,0,0.661585194164886,0.65954501176592,1.45317984026315,0.784068024066026,1.90995750405018,0.656563598980245,0.582961673259701,67.8656605358465,0,0,0,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0,0,1.73984796469624,1.01659733563424,0.972048067396211,0.209088296014469,0.655087691238533,0.404593039154462,0.330613822901344,0,1.8146096260851,0,0.56369293868419,1.64468200648377,0.66183396182839,4.86127970860119,4.1331143512874,7.09615727061268,6.33729088687071,5.07797100891405,2.9360616439199,1.20792060413003,1.15212002503146,0,0,0.410843828659309,0,0.179026695667481,0.596044064343795,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,6.43759264784788,5.20340368334959,0,0.386379188064381,0.375364950902364,0.73260649706906,0,0,210.087685453549,227.400666834545,222.283459214486,250.561939857097,186.342445377615,213.021079063896,210.607020072323,167.069166396186,175.366112276887,209.692926259487,6.01966615988225,11.1726964552289,6.82934423016537,6.56388136084394,7.33646069197938,10.2952364732008,6.44515510624684,7.82933217507798,10.2694147069381,6.31743029409494,10.1391719956096,8.11093267960128,9.36415074698824,9.34767225111091,8.95993315707567,16.1939855036245,9.618399053423,10.4170979050401,7.82963211526283,10.745521169811,5.82877729055206,7.27650805253284,7.62995807831427,7.26732083161643,6.11710972699649,7.44608549446753,6.76833499629258,7.89209134313529,7.33342214767654,4.48913817326191,8.54172130494054,8.66839444904958,9.82154503607254,11.0005157242036,8.68079749415136,21.9833308585392,8.18760629558929,9.88406848622172,9.75570493551101,3.97064554415128,2.08681052058379 | |phase1_expression=3.20297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,26.1082900763784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,3.12956537739216,61.7011192556664,30.9757517655605,25.0814569805826,31.0769856008305,73.3138078261355,0.167782606057736,0,0,0,0,0,42.2841403196559,51.3121249893872,50.0726808769882,3.72728985276045,3.55717918444456,0.449949858640699,0.988866362566974,0.7104801149461,23.3688086204356,29.9690278150813,27.1666784248211,27.0011876663381,18.5085965989216,181.102724112011,129.649833538597,20.9459266657571,19.8400125007749,14.7075005857603,103.508928139425,105.980490610706,83.4083475581402,52.8864013798077,46.9331611680362,47.4031167206652,79.2879717163922,69.7825636439283,82.052659056147,149.37669283515,130.697202973577,65.4262054846805,1.06016670666458,3.24957708459178,0,0,0,0.539703191637817,0,0,5.05599912474307,0,0,0,3.52108549441701,0,0,0,0,0,0,2.2836775943812,0,1.33597925158342,1.04091196059682,1.82679286987285,2.7673859670727,1.3565037649736,3.52766121407114,0.376999773989026,0,0.144599356919912,0,0.323533699894818,0.441683036920787,0.484875253135222,0,93.3970742466835,120.64130312455,0,0,0,0,60.6652089589532,87.8401157411763,57.2983845634662,147.40302352305,162.12359994743,89.1410711160513,108.701646255398,2.74966282395854,0.995255764880744,1.76905930903572,10.5220927943237,2.86264974517948,5.0578462975364,10.803727788321,8.89158425230719,25.3776141834453,25.2384028961154,29.6097449608743,26.6464471861186,0.431135985865684,0.189106080167819,0.175951124163949,0.43839146485515,1.11218899690239,0.348252166522167,0.823128545631774,0.59710280045548,0,0,0,0.207125772535502,0.469052119962192,0,0,0,0.154267112887378,0.232533944750408,0.268273401399619,1.05088808130453,0,0,0.405344047729279,0,0,0,124.701939498527,33.1352851861296,0,0.264450566663544,1.2797295032114,0.464473343720877,0.644337306610467,0.605050573870028,0.667134131534611,0.760902504450237,0.474529061544512,1.15289268306808,0.502670417600539,0.994782360205754,0.974820435595601,0,0.648414149624083,0.597423819763102,0.189667900953082,0.799739588268102,0,1.01825663922657,1.16371492300575,1.05203729835478,0.252946148497029,0,0.156998727841375,0,0,0,0,0,0,0,0.50925170356284,0.863088412352432,0.162135226775035,0,0,0,0,0,0,0,0,0.568474235311454,0.651859905768103,0.169745085775188,0.234690248288502,0.502518772325447,0.238043640886014,1.17080188714679,0,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0.491764273019036,0.827810238914197,65.5046407150191,66.5762379843714,0,0.252470927204373,4.73262329124385,3.90438744296638,8.18608911384636,2.86762557543062,5.34716817797746,4.24614796183249,8.09621403349789,14.3205370376543,16.602086673754,215.606603319033,2.2710413633323,0.178065603667255,1.14020871547503,1.31976098378028,0,0.971122544619926,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,1.03135543248187,15.6602218646742,2.70091641046965,2.06973894052407,3.42939256050548,5.67488747655275,3.38900753443934,4.77192159746151,6.69822888052118,0,0,0.661585194164886,0.65954501176592,1.45317984026315,0.784068024066026,1.90995750405018,0.656563598980245,0.582961673259701,67.8656605358465,0,0,0,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0,0,1.73984796469624,1.01659733563424,0.972048067396211,0.209088296014469,0.655087691238533,0.404593039154462,0.330613822901344,0,1.8146096260851,0,0.56369293868419,1.64468200648377,0.66183396182839,4.86127970860119,4.1331143512874,7.09615727061268,6.33729088687071,5.07797100891405,2.9360616439199,1.20792060413003,1.15212002503146,0,0,0.410843828659309,0,0.179026695667481,0.596044064343795,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,6.43759264784788,5.20340368334959,0,0.386379188064381,0.375364950902364,0.73260649706906,0,0,210.087685453549,227.400666834545,222.283459214486,250.561939857097,186.342445377615,213.021079063896,210.607020072323,167.069166396186,175.366112276887,209.692926259487,6.01966615988225,11.1726964552289,6.82934423016537,6.56388136084394,7.33646069197938,10.2952364732008,6.44515510624684,7.82933217507798,10.2694147069381,6.31743029409494,10.1391719956096,8.11093267960128,9.36415074698824,9.34767225111091,8.95993315707567,16.1939855036245,9.618399053423,10.4170979050401,7.82963211526283,10.745521169811,5.82877729055206,7.27650805253284,7.62995807831427,7.26732083161643,6.11710972699649,7.44608549446753,6.76833499629258,7.89209134313529,7.33342214767654,4.48913817326191,8.54172130494054,8.66839444904958,9.82154503607254,11.0005157242036,8.68079749415136,21.9833308585392,8.18760629558929,9.88406848622172,9.75570493551101,3.97064554415128,2.08681052058379 | ||
|short_description=p1@Trim9 | |short_description=p1@Trim9 | ||
}} | }} |
Latest revision as of 17:53, 26 September 2015
Short description: | p1@Trim9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trim9_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 253bp_to_ENSMUST00000081485, ENSMUST00000110520, ENSMUST00000110522, ENSMUST00000167755, NM_001110202, NM_001110203, NM_053167, uc007nto.2, uc007ntp.2, uc007ntq.2, uc007ntr.2, uc007nts.2, uc011ynj.1, uc011ynk.1, uc011ynl.1_5end |
EntrezGene: | Trim9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.04e-20 | 44 |
neurectodermal cell | 2.04e-20 | 44 |
neural cell | 2.31e-20 | 43 |
neuron | 1.72e-16 | 33 |
neuronal stem cell | 1.72e-16 | 33 |
neuroblast | 1.72e-16 | 33 |
electrically signaling cell | 1.72e-16 | 33 |
CNS neuron (sensu Vertebrata) | 5.63e-15 | 23 |
neuroblast (sensu Vertebrata) | 5.63e-15 | 23 |
electrically responsive cell | 8.72e-12 | 39 |
electrically active cell | 8.72e-12 | 39 |