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FFCP PHASE1:Mm9::chr12:47919736..47919775,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=664883
|EntrezGene=664883
|HGNC=
|HGNC=
|MCL_coexpression_id=87
|TSSclassifier=NA
|UniProt=Q9JKN6
|UniProt=Q9JKN6
|association_with_transcript=0bp_to_ENSMUST00000021438,NM_021361,uc007nmd.2,uc007nme.2_5end
|association_with_transcript=0bp_to_ENSMUST00000021438,NM_021361,uc007nmd.2,uc007nme.2_5end
|cluster_id=chr12:47919736..47919775,-
|description=CAGE_peak_3_at_Nova1_5end
|description=CAGE_peak_3_at_Nova1_5end
|id=chr12:47919736..47919775,-
|id=chr12:47919736..47919775,-
|ontology_enrichment_celltype=CL:0000540!4.54e-13!33;CL:0000047!4.54e-13!33;CL:0000031!4.54e-13!33;CL:0000404!4.54e-13!33;CL:0000117!4.94e-13!23;CL:0000337!4.94e-13!23;CL:0002319!8.84e-12!43;CL:0000221!9.37e-12!44;CL:0000133!9.37e-12!44;CL:0000393!1.63e-08!39;CL:0000211!1.63e-08!39;CL:0000055!1.32e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.88e-15,23;CL:0000337,2.88e-15,23;CL:0000540,1.84e-12,33;CL:0000047,1.84e-12,33;CL:0000031,1.84e-12,33;CL:0000404,1.84e-12,33;CL:0000393,4.02e-09,39;CL:0000211,4.02e-09,39;CL:0002319,6.19e-09,43;CL:0000221,1.60e-08,44;CL:0000133,1.60e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.96e-28!102;UBERON:0000924!3.96e-28!102;UBERON:0006601!3.96e-28!102;UBERON:0001017!8.53e-28!73;UBERON:0005743!8.53e-28!73;UBERON:0000073!6.43e-27!75;UBERON:0001016!6.43e-27!75;UBERON:0002346!8.34e-23!71;UBERON:0003075!8.34e-23!71;UBERON:0007284!8.34e-23!71;UBERON:0001049!1.07e-21!52;UBERON:0005068!1.07e-21!52;UBERON:0006241!1.07e-21!52;UBERON:0007135!1.07e-21!52;UBERON:0000033!1.42e-21!63;UBERON:0000955!7.67e-20!50;UBERON:0006238!7.67e-20!50;UBERON:0002616!2.64e-19!49;UBERON:0003056!1.07e-18!49;UBERON:0002020!6.10e-18!34;UBERON:0003080!2.79e-16!40;UBERON:0002780!1.34e-15!39;UBERON:0001890!1.34e-15!39;UBERON:0006240!1.34e-15!39;UBERON:0002791!2.01e-14!29;UBERON:0003528!2.01e-14!29;UBERON:0001893!2.01e-14!29;UBERON:0000153!9.19e-10!94;UBERON:0000956!2.44e-09!21;UBERON:0001869!2.44e-09!21;UBERON:0000203!2.44e-09!21;UBERON:0007811!3.59e-09!86;UBERON:0002619!7.45e-09!17;UBERON:0000468!3.64e-07!333;UBERON:0002021!3.72e-07!10;UBERON:0000411!3.72e-07!10;UBERON:0001950!3.72e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.35e-27,95;UBERON:0000924,1.35e-27,95;UBERON:0006601,1.35e-27,95;UBERON:0001017,2.63e-25,73;UBERON:0001016,4.61e-24,75;UBERON:0002346,5.49e-24,64;UBERON:0003075,5.49e-24,64;UBERON:0007284,5.49e-24,64;UBERON:0010371,1.76e-23,73;UBERON:0000073,4.75e-23,54;UBERON:0001049,1.67e-21,52;UBERON:0005068,1.67e-21,52;UBERON:0006241,1.67e-21,52;UBERON:0007135,1.67e-21,52;UBERON:0002020,6.67e-20,34;UBERON:0003056,4.71e-18,49;UBERON:0000955,5.20e-17,47;UBERON:0006238,5.20e-17,47;UBERON:0002616,2.33e-16,46;UBERON:0003528,2.48e-15,29;UBERON:0002791,2.48e-15,29;UBERON:0001893,2.48e-15,29;UBERON:0003080,8.90e-15,40;UBERON:0002780,5.90e-14,39;UBERON:0001890,5.90e-14,39;UBERON:0006240,5.90e-14,39;UBERON:0010314,2.85e-12,92;UBERON:0002619,1.48e-09,17;UBERON:0002021,3.54e-09,10;UBERON:0000411,3.54e-09,10;UBERON:0001950,3.54e-09,10;UBERON:0000956,7.39e-09,21;UBERON:0001869,7.39e-09,21;UBERON:0000203,7.39e-09,21;UBERON:0002420,2.29e-08,8;UBERON:0007245,2.29e-08,8;UBERON:0010009,2.29e-08,8;UBERON:0010011,2.29e-08,8;UBERON:0000454,2.29e-08,8;UBERON:0003076,1.41e-07,12;UBERON:0003057,1.41e-07,12;UBERON:0002240,7.12e-07,6;UBERON:0005174,7.12e-07,6;UBERON:0001137,7.12e-07,6
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.878744730937887,0.972149495371417,0.839918529752175,2.87505128729943,0,0,0,0,0,0,30.5497855897993,33.8554226734101,29.7900759647904,0,0.889294796111139,0,0,0,0.299600110518405,2.30530983192933,0.622137673850866,1.08004750665353,0.841299845405528,11.9973413449598,11.2642955885323,3.06226998037385,3.64212789869298,1.83843757322004,5.50579404996943,7.2781782708557,10.9060638611933,23.3438729282443,23.6038120494217,19.2737947106001,9.49222196604695,9.56696437053856,5.95913166329559,18.2669722993674,14.5219114415085,20.5039390407831,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0,0,0.505524445014783,0.45673551887624,0.517875767294343,0.593768556259299,0.173485326766136,0,0.230615497256059,0.452167921657868,1.29347577849275,0.376999773989026,0,0.86759614151947,0,0.970601099684455,0.220841518460394,0.484875253135222,0,7.90508151931177,4.60782754989601,0,0,0,0,12.5824137100051,11.8950156732843,10.178002521142,10.6032835317289,7.16003280524926,10.8049783170971,8.27430441645564,1.2220723662038,1.36847667671102,0,1.05220927943237,2.21204753036596,2.75882525320168,2.88099407688559,1.80845781402858,3.19771546011241,2.3060469651273,1.78033276663485,2.84573707812917,0.431135985865684,0.756424320671277,0.879755620819744,0.219195732427575,2.78047249225598,0.348252166522167,1.4404749548556,0.59710280045548,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0,0.329119699826961,0,0.405344047729279,0.146199987425332,0.878200461164203,0.134206418760372,3.99550902271842,4.83651678182637,0,0,0,1.39342003116263,0.38660238396628,0.201683524623343,0,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.456994050438915,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0.369506380333209,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0,0,0.390267295715598,0.315270288212382,0.664394068946325,0.318909537314974,0.81931657357869,0.345369963731791,0.433947175744535,0,0,0,1.37968373152366,9.47248480927973,10.7834751664827,0,3.02965112645248,0.631016438832513,1.95219372148319,0.861693590931196,1.19484398976276,0.445597348164788,3.11384183867716,2.42886421004937,1.16902343164525,0.395287777946524,4.81981974632711,0.567760340833074,0.178065603667255,0.81443479676788,1.64970122972535,0,0.242780636154981,0,0.377210159511796,0,0.307435147943927,1.03371317267288,0.727067458955011,1.42598951353889,1.26414703174326,0,0,2.04263763452273,2.52085531643834,0.388076051348264,0.857348140126369,0.709360934569094,0.535106452806212,1.31639216481697,0.608929898229199,0.23467170806371,0,0,2.96795255294664,3.55221738730992,1.68876189798836,0.477489376012546,1.64140899745061,0,8.90041449650446,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0.632671987162271,0.406638934253697,0.108005340821801,0.209088296014469,0.436725127492355,0.809186078308924,0.41326727862668,0.523511883968059,0.129614973291793,0,0,0.747582730219894,0.496375471371293,0.388902376688095,0.516639293910924,0.337912250981556,0.704143431874524,0,0.524296722128554,0.241584120826006,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,1.58711268530648,0,0.0897138566094757,0,0.19318959403219,0.375364950902364,1.64836461840539,1.07184189539533,0,11.8597886949584,8.74617949363636,5.72895513439397,5.84300819968538,7.53590771747707,6.7985450765073,6.75022500231806,13.5096360967266,8.60970577069989,12.4262474820437,3.73634451303036,6.78342284781753,3.58540572083682,3.16038732188782,3.14419743941973,2.94149613520023,3.11145418922261,3.5025959730612,4.49286893428541,3.28506375292937,3.04175159868288,2.64076877940507,2.71560371662659,3.07320731543373,2.52716063404698,3.81034953026459,2.31768651889711,3.08654752741928,0.824171801606613,3.23837624295674,3.08582327146874,2.66213709239006,3.09967046931517,2.76158191601424,2.82328141245992,3.46919892355874,2.19513567447327,3.41990624869196,3.12349461845482,3.36685362994643,2.60997039873183,2.06859412988683,2.04615521584845,4.02835787083512,2.12197272079256,5.9954538705107,3.04111090979031,2.36358159453128,2.86932498103265,1.54413993383661,1.39120701372253
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.878744730937887,0.972149495371417,0.839918529752175,2.87505128729943,0,0,0,0,0,0,30.5497855897993,33.8554226734101,29.7900759647904,0,0.889294796111139,0,0,0,0.299600110518405,2.30530983192933,0.622137673850866,1.08004750665353,0.841299845405528,11.9973413449598,11.2642955885323,3.06226998037385,3.64212789869298,1.83843757322004,5.50579404996943,7.2781782708557,10.9060638611933,23.3438729282443,23.6038120494217,19.2737947106001,9.49222196604695,9.56696437053856,5.95913166329559,18.2669722993674,14.5219114415085,20.5039390407831,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0,0,0.505524445014783,0.45673551887624,0.517875767294343,0.593768556259299,0.173485326766136,0,0.230615497256059,0.452167921657868,1.29347577849275,0.376999773989026,0,0.86759614151947,0,0.970601099684455,0.220841518460394,0.484875253135222,0,7.90508151931177,4.60782754989601,0,0,0,0,12.5824137100051,11.8950156732843,10.178002521142,10.6032835317289,7.16003280524926,10.8049783170971,8.27430441645564,1.2220723662038,1.36847667671102,0,1.05220927943237,2.21204753036596,2.75882525320168,2.88099407688559,1.80845781402858,3.19771546011241,2.3060469651273,1.78033276663485,2.84573707812917,0.431135985865684,0.756424320671277,0.879755620819744,0.219195732427575,2.78047249225598,0.348252166522167,1.4404749548556,0.59710280045548,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0,0.329119699826961,0,0.405344047729279,0.146199987425332,0.878200461164203,0.134206418760372,3.99550902271842,4.83651678182637,0,0,0,1.39342003116263,0.38660238396628,0.201683524623343,0,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.456994050438915,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0.369506380333209,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0,0,0.390267295715598,0.315270288212382,0.664394068946325,0.318909537314974,0.81931657357869,0.345369963731791,0.433947175744535,0,0,0,1.37968373152366,9.47248480927973,10.7834751664827,0,3.02965112645248,0.631016438832513,1.95219372148319,0.861693590931196,1.19484398976276,0.445597348164788,3.11384183867716,2.42886421004937,1.16902343164525,0.395287777946524,4.81981974632711,0.567760340833074,0.178065603667255,0.81443479676788,1.64970122972535,0,0.242780636154981,0,0.377210159511796,0,0.307435147943927,1.03371317267288,0.727067458955011,1.42598951353889,1.26414703174326,0,0,2.04263763452273,2.52085531643834,0.388076051348264,0.857348140126369,0.709360934569094,0.535106452806212,1.31639216481697,0.608929898229199,0.23467170806371,0,0,2.96795255294664,3.55221738730992,1.68876189798836,0.477489376012546,1.64140899745061,0,8.90041449650446,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0.632671987162271,0.406638934253697,0.108005340821801,0.209088296014469,0.436725127492355,0.809186078308924,0.41326727862668,0.523511883968059,0.129614973291793,0,0,0.747582730219894,0.496375471371293,0.388902376688095,0.516639293910924,0.337912250981556,0.704143431874524,0,0.524296722128554,0.241584120826006,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,1.58711268530648,0,0.0897138566094757,0,0.19318959403219,0.375364950902364,1.64836461840539,1.07184189539533,0,11.8597886949584,8.74617949363636,5.72895513439397,5.84300819968538,7.53590771747707,6.7985450765073,6.75022500231806,13.5096360967266,8.60970577069989,12.4262474820437,3.73634451303036,6.78342284781753,3.58540572083682,3.16038732188782,3.14419743941973,2.94149613520023,3.11145418922261,3.5025959730612,4.49286893428541,3.28506375292937,3.04175159868288,2.64076877940507,2.71560371662659,3.07320731543373,2.52716063404698,3.81034953026459,2.31768651889711,3.08654752741928,0.824171801606613,3.23837624295674,3.08582327146874,2.66213709239006,3.09967046931517,2.76158191601424,2.82328141245992,3.46919892355874,2.19513567447327,3.41990624869196,3.12349461845482,3.36685362994643,2.60997039873183,2.06859412988683,2.04615521584845,4.02835787083512,2.12197272079256,5.9954538705107,3.04111090979031,2.36358159453128,2.86932498103265,1.54413993383661,1.39120701372253
|short_description=p3@Nova1
|short_description=p3@Nova1
}}
}}

Latest revision as of 15:23, 26 September 2015

Short description:p3@Nova1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nova1_5end
Coexpression cluster:MCL_coexpression_mm9:87
Association with transcript: 0bp_to_ENSMUST00000021438, NM_021361, uc007nmd.2, uc007nme.2_5end
EntrezGene:Nova1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nova1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C330.55
Mouse Granule cells, donor2.CNhs12357.11731-123E333.86
Mouse Granule cells, donor3.CNhs12108.11636-122C729.79
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.26
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D423.34
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F423.60
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D819.27
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.96
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.52
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E120.50
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.91
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A412.58
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F110.18
cortex, adult.CNhs10473.12-14D510.60
cortex, neonate N30.CNhs11107.1392-42F27.16
diencephalon, adult.CNhs10482.20-12F210.80
diencephalon, neonate N30.CNhs11201.1388-42B28.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C63.20
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G14.84
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C29.47
medulla oblongata, neonate N30.CNhs11200.1396-42A310.78
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C32.97
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H31.69
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C98.90
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.51
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I83.74
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.07
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.03
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I56.00
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.88e-1523
neuroblast (sensu Vertebrata)2.88e-1523
neuron1.84e-1233
neuronal stem cell1.84e-1233
neuroblast1.84e-1233
electrically signaling cell1.84e-1233
electrically responsive cell4.02e-0939
electrically active cell4.02e-0939
neural cell6.19e-0943
ectodermal cell1.60e-0844
neurectodermal cell1.60e-0844

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.35e-2795
ectoderm1.35e-2795
presumptive ectoderm1.35e-2795
central nervous system2.63e-2573
nervous system4.61e-2475
neurectoderm5.49e-2464
neural plate5.49e-2464
presumptive neural plate5.49e-2464
ecto-epithelium1.76e-2373
regional part of nervous system4.75e-2354
neural tube1.67e-2152
neural rod1.67e-2152
future spinal cord1.67e-2152
neural keel1.67e-2152
gray matter6.67e-2034
pre-chordal neural plate4.71e-1849
brain5.20e-1747
future brain5.20e-1747
regional part of brain2.33e-1646
brain grey matter2.48e-1529
regional part of telencephalon2.48e-1529
telencephalon2.48e-1529
anterior neural tube8.90e-1540
regional part of forebrain5.90e-1439
forebrain5.90e-1439
future forebrain5.90e-1439
structure with developmental contribution from neural crest2.85e-1292
regional part of cerebral cortex1.48e-0917
occipital lobe3.54e-0910
visual cortex3.54e-0910
neocortex3.54e-0910
cerebral cortex7.39e-0921
cerebral hemisphere7.39e-0921
pallium7.39e-0921
basal ganglion2.29e-088
nuclear complex of neuraxis2.29e-088
aggregate regional part of brain2.29e-088
collection of basal ganglia2.29e-088
cerebral subcortex2.29e-088
posterior neural tube1.41e-0712
chordal neural plate1.41e-0712
spinal cord7.12e-076
dorsal region element7.12e-076
dorsum7.12e-076
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