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FFCP PHASE1:Mm9::chr12:101437771..101437788,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12313
|EntrezGene=12313
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=P62204
|UniProt=P62204
|association_with_transcript=20bp_to_NM_009790,uc007osq.1_5end
|association_with_transcript=20bp_to_NM_009790,uc007osq.1_5end
|cluster_id=chr12:101437771..101437788,+
|description=CAGE_peak_3_at_Calm1_5end
|description=CAGE_peak_3_at_Calm1_5end
|id=chr12:101437771..101437788,+
|id=chr12:101437771..101437788,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.45e-11,75;UBERON:0000073,4.03e-11,54;UBERON:0001017,1.95e-10,73;UBERON:0001049,4.24e-10,52;UBERON:0005068,4.24e-10,52;UBERON:0006241,4.24e-10,52;UBERON:0007135,4.24e-10,52;UBERON:0002020,6.54e-10,34;UBERON:0004121,9.72e-09,95;UBERON:0000924,9.72e-09,95;UBERON:0006601,9.72e-09,95;UBERON:0002346,2.34e-08,64;UBERON:0003075,2.34e-08,64;UBERON:0007284,2.34e-08,64;UBERON:0000955,5.29e-08,47;UBERON:0006238,5.29e-08,47;UBERON:0002021,5.58e-08,10;UBERON:0000411,5.58e-08,10;UBERON:0001950,5.58e-08,10;UBERON:0010371,9.54e-08,73;UBERON:0003528,1.01e-07,29;UBERON:0002791,1.01e-07,29;UBERON:0001893,1.01e-07,29;UBERON:0002616,1.34e-07,46;UBERON:0003080,2.33e-07,40;UBERON:0002780,6.50e-07,39;UBERON:0001890,6.50e-07,39;UBERON:0006240,6.50e-07,39
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|short_description=p3@Calm1
|short_description=p3@Calm1
}}
}}

Latest revision as of 04:41, 26 September 2015

Short description:p3@Calm1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Calm1_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 20bp_to_NM_009790, uc007osq.1_5end
EntrezGene:Calm1
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p3@Calm1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G730.43
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I538.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I639.13
CD326+ enterocyte, pool1.CNhs13542.11848-124I326.92
CD326+ enterocyte, pool2.CNhs13197.11849-124I423.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.25
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I820.56
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E713.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.95
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.56
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.49
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.05
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.21
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3211.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.01
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D137.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D237.85
GP2+ M cell, pool1.CNhs13228.11845-124H934.45
GP2+ M cell, pool2.CNhs13231.11846-124I132.74
GP2+ M cell, pool3.CNhs13240.11847-124I229.30
Ileum epithelium, pool1.CNhs13199.10252-104B971.64
Ileum epithelium, pool2.CNhs13232.10253-104C146.88
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C839.25
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G813.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H113.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H314.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H415.05
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.55
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.18
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.71
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.13
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.30
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.53
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.88
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C137.82
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E133.52
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C522.17
Mouse Granule cells, donor1.CNhs12131.11713-123C314.57
Mouse Granule cells, donor2.CNhs12357.11731-123E319.57
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.10
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F175.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D579.07
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.57
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3168.48
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3168.93
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7141.01
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.27
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.19
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4123.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E584.98
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I695.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D686.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F683.86
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E127.77
Mouse Schwann, donor1.CNhs12507.11728-123D931.81
Mouse Schwann, donor2.CNhs12573.11746-123F948.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A734.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I732.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E331.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I827.21
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G620.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G134.64
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G237.75
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G335.89
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B641.22
accessory axillary lymph node, adult.CNhs10475.1063-29H912.17
adrenal gland, adult.CNhs10508.49-24D79.80
adrenal gland, embryo E14.CNhs11038.406-44C59.54
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F58.14
adrenal gland, neonate N00.CNhs11191.1311-23C16.11
adrenal gland, neonate N25.CNhs11223.1377-27I36.03
amnion, adult pregnant day17.5.CNhs10488.583-22A826.20
aorta, adult.CNhs10498.46-23H16.07
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F59.06
bone (os femoris), neonate N16.CNhs11225.1525-43A66.40
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B264.70
cerebellum, neonate N30.CNhs11135.1395-42I258.65
colon, adult.CNhs10468.36-18H740.36
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.59
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.45
corpora quadrigemina, adult.CNhs10501.16-22A4136.16
corpus striatum, adult.CNhs10487.19-21D8176.14
corpus striatum, neonate N00.CNhs11226.630-43F131.66
cortex, adult.CNhs10473.12-14D5183.91
cortex, neonate N30.CNhs11107.1392-42F2165.96
diencephalon, adult.CNhs10482.20-12F2117.61
diencephalon, neonate N30.CNhs11201.1388-42B2121.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.99
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.34
epididymis, adult.CNhs10490.58-23B212.13
eyeball, adult.CNhs10484.31-12G413.47
eyeball, embryo E12.CNhs11016.345-16C64.03
eyeball, embryo E14.CNhs10521.399-16E26.21
eyeball, embryo E15.CNhs10593.426-16C99.36
eyeball, embryo E17.CNhs11023.1261-18D48.29
eyeball, neonate N00.CNhs11207.633-15C65.72
eyeball, neonate N01.CNhs11140.1532-43E710.25
eyeball, neonate N02.CNhs11205.1551-44G87.12
eyeball, neonate N16.CNhs11188.777-19A230.01
forelimb, embryo E11.CNhs10596.335-25E26.90
forelimb, embryo E12.CNhs10600.359-14H27.94
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A88.55
forelimb, embryo E15.CNhs11007.437-20E79.45
forelimb, embryo E17.CNhs10598.1517-43C413.93
forelimb, embryo E18.CNhs11008.1520-43B513.99
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.66
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.68
heart, embryo E11.CNhs10586.331-24E96.84
heart, embryo E12.CNhs11015.353-12F56.80
heart, embryo E13.CNhs11013.376-3I97.38
heart, embryo E14.CNhs10597.403-26D46.16
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C64.94
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G35.90
heart, neonate N00.CNhs11213.639-21E33.50
heart, neonate N03.CNhs11221.1349-25I24.11
heart, neonate N10.CNhs11118.749-24G15.58
heart, neonate N16.CNhs11209.782-15G14.86
heart, neonate N20.CNhs11127.821-26I64.09
heart, neonate N25.CNhs11196.1351-25D35.71
heart, neonate N30.CNhs11202.1390-42D23.22
hippocampus, adult.CNhs10478.13-16E8154.98
hippocampus, neonate N00.CNhs11228.627-43G131.28
intestinal mucosa, adult.CNhs10506.860-29I342.29
intestine, adult.CNhs10496.178-9A342.58
intestine, embryo E12.CNhs11019.1251-16I55.55
intestine, embryo E13.CNhs11010.381-16D56.73
intestine, embryo E15.CNhs10602.976-16D813.02
intestine, embryo E16.CNhs10585.463-22H416.94
intestine, embryo E17.CNhs10582.482-18D322.24
intestine, embryo E18.CNhs10526.1289-20F724.73
intestine, neonate N00.CNhs11126.644-26D135.12
intestine, neonate N01.CNhs11192.1322-23E924.87
intestine, neonate N06.CNhs11102.688-20B818.85
intestine, neonate N07.CNhs11095.720-20F229.25
intestine, neonate N10.CNhs11098.755-23A517.16
intestine, neonate N20.CNhs11187.827-18D129.66
intestine, neonate N25.CNhs11121.1352-25E328.31
intestine, neonate N30.CNhs11131.1384-42G125.89
kidney, embryo E14.CNhs10606.411-4I97.02
kidney, embryo E15.CNhs10997.434-16F85.71
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I25.70
kidney, embryo E18.CNhs11001.1288-20C75.24
kidney, neonate N00.CNhs11214.646-21G73.86
kidney, neonate N10.CNhs11206.758-6D54.81
kidney, neonate N20.CNhs11113.832-19I17.38
kidney, neonate N25.CNhs11122.1353-25F35.49
kidney, neonate N30.CNhs11203.1385-42H12.71
liver, adult pregnant day01.CNhs10466.508-5B26.52
liver, embryo E12.CNhs10601.355-15F86.51
liver, embryo E13.CNhs10524.378-3H67.47
liver, embryo E14.CNhs10594.409-16E14.72
liver, embryo E15.CNhs10520.433-16D74.46
liver, embryo E16.CNhs10523.462-17F55.55
liver, embryo E17.CNhs10510.481-18A35.86
liver, embryo E18.CNhs10579.499-43G45.47
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G26.86
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H14.48
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B116.44
lung, embryo E12.CNhs10522.354-16G26.63
lung, embryo E14.CNhs10604.404-26F88.47
lung, embryo E15.CNhs11020.432-17C59.85
lung, embryo E16.CNhs10998.458-17B67.98
lung, embryo E17.CNhs10605.480-44A66.87
lung, embryo E18.CNhs10583.1287-20I614.52
lung, neonate N00.CNhs11224.640-42C610.54
lung, neonate N06.CNhs11212.683-20E510.09
lung, neonate N07.CNhs11111.715-19A39.97
lung, neonate N10.CNhs11219.750-23E68.29
lung, neonate N20.CNhs11109.822-18A48.36
lung, neonate N25.CNhs11119.1359-25C711.74
lung, neonate N30.CNhs11133.1394-42H27.67
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A121.11
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A151.67
mammary gland, adult lactating day02.CNhs10480.595-22B67.38
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C2143.37
medulla oblongata, neonate N30.CNhs11200.1396-42A3121.55
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.56
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.31
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.78
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.88
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.34
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.08
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.69
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.21
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.76
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.66
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.18
olfactory brain, adult.CNhs10489.18-22I958.80
ovary, adult.CNhs10507.91-2I74.68
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G610.72
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F48.50
pancreas, embryo E15.CNhs11042.1556-45F28.16
pancreas, embryo E16.CNhs11003.460-26E57.92
pancreas, embryo E17.CNhs10599.1558-45G38.27
pancreas, embryo E18.CNhs10580.1535-43I77.69
pancreas, neonate N00.CNhs11105.645-26G912.15
pancreas, neonate N01.CNhs11138.1531-43D712.36
pancreas, neonate N02.CNhs11139.1539-43D810.69
pancreas, neonate N16.CNhs11136.787-43B67.58
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G89.19
pituitary gland, embryo E12.CNhs11018.346-16E67.38
pituitary gland, embryo E13.CNhs11009.370-44C75.17
pituitary gland, embryo E14.CNhs11037.398-44A57.29
pituitary gland, embryo E15.CNhs10592.427-16B98.87
pituitary gland, embryo E16.CNhs11036.449-43F610.88
pituitary gland, embryo E17.CNhs11039.1265-44F512.83
pituitary gland, neonate N00.CNhs11190.1308-22E910.66
placenta, adult pregnant day10.CNhs10472.539-13I731.45
placenta, adult pregnant day17.CNhs10464.577-18G347.03
prostate, adult.CNhs10470.859-1F816.76
skin, adult.CNhs10492.30-1C38.08
skin, neonate N00.CNhs11124.650-25G49.36
skin, neonate N03.CNhs11215.662-22H39.23
skin, neonate N06.CNhs11097.693-20I510.98
skin, neonate N10.CNhs11108.762-6C48.70
small intestine, neonate N16.CNhs11114.790-21I124.48
spinal cord, adult.CNhs10505.24-13C9148.15
spleen, adult.CNhs10465.25-2G27.01
spleen, embryo E16.CNhs11035.461-43C19.49
spleen, embryo E18.CNhs11011.1271-21F29.63
spleen, neonate N10.CNhs11116.752-24D15.27
spleen, neonate N20.CNhs11112.824-19H15.74
spleen, neonate N25.CNhs11099.1354-25G36.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.98
stomach, adult.CNhs10503.33-1H625.78
stomach, embryo E12.CNhs10588.356-43E37.43
stomach, embryo E15.CNhs10603.1252-16G89.35
stomach, embryo E16.CNhs11022.459-17D49.83
stomach, embryo E17.CNhs11006.1035-18D512.75
stomach, embryo E18.CNhs10999.1286-20C613.32
stomach, neonate N03.CNhs11193.1340-24B815.10
stomach, neonate N07.CNhs11210.718-18A912.32
stomach, neonate N25.CNhs11104.1355-25E418.58
stomach, neonate N30.CNhs11134.1386-42I125.15
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G51357.94
testis, embryo E13.CNhs11031.389-23F55.68
testis, embryo E15.CNhs11034.443-27C54.63
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I54.91
testis, embryo E18.CNhs11027.503-18G53.72
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I44.69
testis, neonate N10.CNhs11204.763-44D98.70
testis, neonate N20.CNhs11110.839-18H3460.94
testis, neonate N30.CNhs11130.1391-42E2610.05
thymus, adult.CNhs10471.38-12B59.16
thymus, embryo E14.CNhs11041.402-44I48.31
thymus, embryo E15.CNhs11005.430-45I24.42
thymus, embryo E16.CNhs11002.456-26C56.24
thymus, embryo E17.CNhs10581.478-18C15.01
thymus, embryo E18.CNhs10595.1273-19G46.16
thymus, neonate N02.CNhs11181.1541-43F84.09
thymus, neonate N03.CNhs11137.2104-43C76.94
thymus, neonate N06.CNhs11197.681-26C46.26
thymus, neonate N07.CNhs11211.713-19D35.72
thymus, neonate N10.CNhs11194.748-24E45.24
thymus, neonate N20.CNhs11186.820-7A27.31
thymus, neonate N25.CNhs11125.1362-25G75.97
thymus, neonate N30.CNhs11132.1393-42G25.38
tongue, adult.CNhs10499.32-1B46.12
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H317.31
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F717.85
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G528.04
urinary bladder, adult.CNhs10481.879-12E48.89
uterus, adult pregnant day19.CNhs10497.590-15F513.33
uterus, adult.CNhs10509.92-27E57.14
vagina, adult.CNhs10502.89-27D58.57
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1251.88
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2248.58
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3250.36
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7219.63
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4206.89
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5234.17
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6205.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7219.76
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8242.43
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9222.64
whole body, embryo E11.CNhs11014.324-5I89.24
whole body, embryo E12.CNhs10587.857-27C98.78
whole body, embryo E13.CNhs10512.372-23H27.17
whole body, embryo E14.5.CNhs10578.420-27D211.67
whole body, embryo E14.CNhs10519.395-14B115.09
whole body, embryo E16.CNhs10514.453-14F214.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.69
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.67
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.54
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.17
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.15
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.62
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.62
whole body, embryo E17.5.CNhs10513.490-9F912.92
whole body, embryo E17.CNhs10517.475-3I515.99
whole body, embryo E18.CNhs10516.493-3B313.57
whole body, neonate N00.CNhs10525.657-19C213.97
whole body, neonate N01.CNhs10576.659-23C69.76
whole body, neonate N06.CNhs10515.692-21D111.25
whole body, neonate N10.CNhs10518.761-6B416.69





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system3.45e-1175
regional part of nervous system4.03e-1154
central nervous system1.95e-1073
neural tube4.24e-1052
neural rod4.24e-1052
future spinal cord4.24e-1052
neural keel4.24e-1052
gray matter6.54e-1034
ectoderm-derived structure9.72e-0995
ectoderm9.72e-0995
presumptive ectoderm9.72e-0995
neurectoderm2.34e-0864
neural plate2.34e-0864
presumptive neural plate2.34e-0864
brain5.29e-0847
future brain5.29e-0847
occipital lobe5.58e-0810
visual cortex5.58e-0810
neocortex5.58e-0810
ecto-epithelium9.54e-0873
brain grey matter1.01e-0729
regional part of telencephalon1.01e-0729
telencephalon1.01e-0729
regional part of brain1.34e-0746
anterior neural tube2.33e-0740
regional part of forebrain6.50e-0739
forebrain6.50e-0739
future forebrain6.50e-0739
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