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FFCP PHASE1:Mm9::chr11:96777692..96777720,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=80280
|EntrezGene=80280
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=B0QZI8
|UniProt=B0QZI8
|association_with_transcript=0bp_to_ENSMUST00000127048_5end
|association_with_transcript=0bp_to_ENSMUST00000127048_5end
|cluster_id=chr11:96777692..96777720,-
|description=CAGE_peak_3_at_Cdk5rap3_5end
|description=CAGE_peak_3_at_Cdk5rap3_5end
|id=chr11:96777692..96777720,-
|id=chr11:96777692..96777720,-
|ontology_enrichment_celltype=CL:0000540!7.92e-12!33;CL:0000047!7.92e-12!33;CL:0000031!7.92e-12!33;CL:0000404!7.92e-12!33;CL:0000117!2.66e-10!23;CL:0000337!2.66e-10!23;CL:0000393!3.75e-10!39;CL:0000211!3.75e-10!39;CL:0000221!1.43e-09!44;CL:0000133!1.43e-09!44;CL:0002319!4.02e-09!43;CL:0000055!2.81e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,4.01e-12,33;CL:0000047,4.01e-12,33;CL:0000031,4.01e-12,33;CL:0000404,4.01e-12,33;CL:0000117,1.49e-10,23;CL:0000337,1.49e-10,23;CL:0000393,2.10e-10,39;CL:0000211,2.10e-10,39;CL:0000221,4.05e-10,44;CL:0000133,4.05e-10,44;CL:0002319,1.19e-09,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!7.68e-13!94;UBERON:0001017!6.76e-12!73;UBERON:0005743!6.76e-12!73;UBERON:0007811!9.60e-12!86;UBERON:0000073!1.08e-10!75;UBERON:0001016!1.08e-10!75;UBERON:0003056!1.35e-10!49;UBERON:0001049!2.95e-10!52;UBERON:0005068!2.95e-10!52;UBERON:0006241!2.95e-10!52;UBERON:0007135!2.95e-10!52;UBERON:0002346!3.58e-10!71;UBERON:0003075!3.58e-10!71;UBERON:0007284!3.58e-10!71;UBERON:0002780!1.92e-09!39;UBERON:0001890!1.92e-09!39;UBERON:0006240!1.92e-09!39;UBERON:0003080!2.43e-09!40;UBERON:0002020!1.27e-08!34;UBERON:0004121!1.79e-08!102;UBERON:0000924!1.79e-08!102;UBERON:0006601!1.79e-08!102;UBERON:0000033!2.66e-08!63;UBERON:0000475!2.90e-08!200;UBERON:0002616!8.52e-08!49;UBERON:0000955!1.94e-07!50;UBERON:0006238!1.94e-07!50
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.49e-12,73;UBERON:0002346,4.40e-12,64;UBERON:0003075,4.40e-12,64;UBERON:0007284,4.40e-12,64;UBERON:0003056,4.18e-11,49;UBERON:0001016,4.76e-11,75;UBERON:0001049,1.64e-10,52;UBERON:0005068,1.64e-10,52;UBERON:0006241,1.64e-10,52;UBERON:0007135,1.64e-10,52;UBERON:0000073,1.90e-10,54;UBERON:0010371,2.08e-10,73;UBERON:0002780,8.83e-10,39;UBERON:0001890,8.83e-10,39;UBERON:0006240,8.83e-10,39;UBERON:0003080,1.13e-09,40;UBERON:0004121,1.46e-09,95;UBERON:0000924,1.46e-09,95;UBERON:0006601,1.46e-09,95;UBERON:0002020,6.17e-09,34;UBERON:0002616,2.34e-08,46;UBERON:0000955,8.81e-08,47;UBERON:0006238,8.81e-08,47
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|phase1_expression=4.16387002472464,0.697950815278722,0.454999239389536,0.60492842261366,0,1.34303417529512,0.467225281191051,2.32421982194837,2.67498572088167,0.936258105287974,1.19852577757853,2.47293692885543,3.0816131387617,2.18551006047494,0.666219523631325,0.809901069559304,0,2.05050407482854,1.23402990245165,1.27316895539409,0.935476191661768,2.78014663362479,3.6567970479451,0.639969691173627,0.68822784320151,1.72269589234506,0.430761996159075,0.430942465371778,0.380046838912748,1.26015064879965,0.886922042621219,1.27006134691926,6.1506478758457,0,0.577703239502549,0.166234645358492,0,0.418531630736908,0.7813353445238,1.57057123192139,0,0,1.45653105909346,1.6366586336825,1.62203089951223,2.20256102594018,2.34717403304412,2.8343270329458,3.73466510648602,2.3331587888914,1.39986421625363,0,0.671130424230945,0.725362142011344,2.35265659399725,0.514518872071894,1.43266719969378,2.57836046138721,10.7227724255587,7.40587370980846,9.50747105259269,1.69422266034566,0.889294796111139,0,0,0.7104801149461,2.09720077362883,1.53687322128622,9.43575472007147,8.6403800532282,9.67494822216357,8.2838785477103,9.49734726091938,8.20688354740192,6.99671938433125,11.0306254393203,2.20231761998777,1.91531007127782,1.0752457327937,8.17694983927202,8.59983849862651,9.89735404057844,1.95428099300967,2.25105044012672,2.29197371665215,4.71405736757868,6.69146899755784,7.26957838718672,0.227178579999552,0.529000920747499,0.579728977403356,2.58127163094416,1.3599426674155,1.61910957491345,3.89865850468601,1.34408066129201,0.702222100658759,0.340860645156116,0.259786004602869,0,4.92951969218382,1.28326477414318,0,0,1.29894624606728,1.26679932737549,1.01104889002957,1.48439043634778,1.8125651855302,0.742210695324124,1.90833859442749,2.43572382649713,0.922461989024234,1.20578112442098,2.23418543557839,0.879666139307728,0.741584903203122,0.144599356919912,0.884610551949874,1.61766849947409,0.883366073841574,2.42437626567611,0,0.292780797011547,1.46612694769419,0.510914110417183,0.479260498023681,1.79970819298022,0.889491589511453,1.9472783122627,0.457500602818626,7.28795242254614,2.08589184230732,2.55715457330331,2.0778804455956,2.10913641988085,4.27725328171328,2.61254638281195,2.27450482590307,0.210441855886474,3.77349284591841,3.90833577536904,2.34080768746954,3.31550599238573,5.57899293040888,4.74020765053944,5.90320864726292,1.03481348295606,1.94011193639558,4.16033376369202,3.16712023495108,2.41115305670332,3.61461423993277,2.089512999133,2.05782136407943,3.38358253591438,0.702213187313235,0.257347907114715,1.70498099637356,3.31401236056803,0.703578179943289,2.16074473753218,1.42046841351126,1.37734962223183,1.85120535464854,0.697601834251224,0.804820204198858,1.63471479314037,1.31647879930784,0.985004784474571,0.324275238183423,0.438599962275997,0.219550115291051,0.536825675041487,1.47202963994889,6.17427674275707,0.991256348951394,0.264450566663544,2.13288250535234,3.71578674976702,1.41754207454303,1.21010114774006,0.889512175379481,0.380451252225118,0.474529061544512,0.823494773620054,0.502670417600539,0.795825888164603,0.19496408711912,0.898819408654221,0.216138049874694,0.398282546508734,2.0863469104839,2.39921876480431,2.25415471346161,1.83286195060783,2.71533482034676,3.43665517462561,2.15004226222475,1.47610147979602,0.941992367048249,1.1105744752962,0.889357881261447,0.166845105716094,1.76903095601883,0.224862112384854,0.608580364165509,1.4470629585145,0.763877555344259,0,1.45921704097532,1.37280706594041,4.31304619582064,2.97712758134803,2.18426371180192,0.757736633841335,0.717589654087649,1.4473305640901,0.739012760666419,3.41084541186873,2.44447464663039,2.37643120085263,1.64283173801951,1.00503754465089,0.714130922658041,2.14647012643579,0.472905432318573,1.99318220683897,2.07291199254733,1.14704320301017,0.345369963731791,0.578596234326046,0,1.08781136763742,0.983528546038072,2.20749397043786,0.963303539926752,1.99259867206745,0.327869890753351,1.00988370881749,1.89304931649754,2.34263246577983,2.15423397732799,2.62865677747807,3.34198011123591,2.83076530788832,5.26253912177363,3.21481443702443,2.37172666767914,0.963963949265421,0.567760340833074,3.38324646967785,4.72372182125371,1.48473110675282,3.98235415019888,2.18502572539483,3.32555912661226,2.26326095707078,2.36241514304618,1.84461088766356,2.84271122485043,3.63533729477506,2.49548164869305,4.42451461110142,4.21674434299995,7.21948802737308,3.40439605753788,4.14140516272013,5.17434735131018,4.50107773566344,4.61084607469911,5.52943334566419,5.75921572107423,7.00269382963578,1.40803024838226,3.81297727554876,1.32317038832977,0.49465875882444,2.26050197374268,0.965006798850494,1.07435109602823,0.656563598980245,0,1.11255181206306,0.512612642393558,2.47664241555867,1.66675074632741,0.753473828018764,0.546776910884101,0.457556346413045,1.18984900995699,1.53946597556024,0.967399816630967,0,2.84702394223022,2.03319467126849,1.72808545314882,1.67270636811575,0.655087691238533,2.15782954215713,1.40510874733071,0.785267825952089,0.90730481304255,0,2.81846469342095,2.99033092087958,2.97825282822776,1.75006069509643,2.71235629303235,2.53434188236167,3.87278887530988,2.604087696879,3.8797957437513,1.44950472495604,2.30424005006292,2.8441000856536,3.44632865993279,3.08132871494482,3.50786222040047,4.11761400035207,3.3775830312815,4.44723163223885,3.39685912501528,3.93769154797776,5.86792411243499,4.94048307170519,4.19068887180935,5.29165129021812,8.41513695707296,0.453460767230423,4.21773311410723,3.94740969081693,3.02192309455341,0.772758376128762,1.68914227906064,1.28206136987086,0.214368379079066,5.01572104035363,2.82375921308533,1.84130094602871,1.71868654031819,4.46818274093588,2.74033007908257,3.0215755895588,4.72515750162264,1.80128481289688,0.453142408984205,1.03552062350364,4.15149390336707,2.79317411380722,5.9756762013947,2.18796045361465,1.88651846365184,1.83843508450014,2.00022055021454,2.06035057238894,1.28367683836726,2.52697211763797,1.52087579934144,1.50901073108861,2.62196220915671,1.92075457214608,1.78049953762401,0.476293691283074,2.31768651889711,2.12200142510076,1.23625770240992,1.61918812147837,2.05721551431249,2.8396128985494,2.62279808942053,1.30811774969096,2.35273451038327,1.94613598150856,2.0122077016005,1.8414879800649,0.679020569229309,1.12228454331548,1.30498519936592,1.87158516513571,0,2.47898945897546,2.12197272079256,2.74791635731741,2.57324769289949,2.36358159453128,1.91288332068843,1.10295709559758,0.927471342481686
|short_description=p3@Cdk5rap3
|short_description=p3@Cdk5rap3
}}
}}

Latest revision as of 01:51, 26 September 2015

Short description:p3@Cdk5rap3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cdk5rap3_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_ENSMUST00000127048_5end
EntrezGene:Cdk5rap3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Cdk5rap3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.47
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.08
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.19
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C310.72
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.44
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.64
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.67
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.21
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.18
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.60
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C12.23
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F17.29
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.28
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.61
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C63.77
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C65.58
eyeball, neonate N01.CNhs11140.1532-43E74.74
eyeball, neonate N02.CNhs11205.1551-44G85.90
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H24.16
forelimb, embryo E13.CNhs10589.384-1E23.17
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G16.17
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G73.44
kidney, neonate N10.CNhs11206.758-6D52.15
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I44.72
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E64.14
pituitary gland, embryo E13.CNhs11009.370-44C75.17
pituitary gland, embryo E14.CNhs11037.398-44A54.50
pituitary gland, embryo E15.CNhs10592.427-16B94.61
pituitary gland, embryo E16.CNhs11036.449-43F65.53
pituitary gland, embryo E17.CNhs11039.1265-44F55.76
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G33.81
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H30.97
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.85
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F52.99
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D93.88
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I23.08
thymus, embryo E16.CNhs11002.456-26C53.51
thymus, embryo E17.CNhs10581.478-18C14.12
thymus, embryo E18.CNhs10595.1273-19G43.38
thymus, neonate N02.CNhs11181.1541-43F84.45
thymus, neonate N03.CNhs11137.2104-43C73.40
thymus, neonate N06.CNhs11197.681-26C43.94
thymus, neonate N07.CNhs11211.713-19D35.87
thymus, neonate N10.CNhs11194.748-24E44.94
thymus, neonate N20.CNhs11186.820-7A24.19
thymus, neonate N25.CNhs11125.1362-25G75.29
thymus, neonate N30.CNhs11132.1393-42G28.42
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.95
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.02
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I84.15
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H25.98
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron4.01e-1233
neuronal stem cell4.01e-1233
neuroblast4.01e-1233
electrically signaling cell4.01e-1233
CNS neuron (sensu Vertebrata)1.49e-1023
neuroblast (sensu Vertebrata)1.49e-1023
electrically responsive cell2.10e-1039
electrically active cell2.10e-1039
ectodermal cell4.05e-1044
neurectodermal cell4.05e-1044
neural cell1.19e-0943

Uber anatomy
Ontology termp-valuen
central nervous system3.49e-1273
neurectoderm4.40e-1264
neural plate4.40e-1264
presumptive neural plate4.40e-1264
pre-chordal neural plate4.18e-1149
nervous system4.76e-1175
neural tube1.64e-1052
neural rod1.64e-1052
future spinal cord1.64e-1052
neural keel1.64e-1052
regional part of nervous system1.90e-1054
ecto-epithelium2.08e-1073
regional part of forebrain8.83e-1039
forebrain8.83e-1039
future forebrain8.83e-1039
anterior neural tube1.13e-0940
ectoderm-derived structure1.46e-0995
ectoderm1.46e-0995
presumptive ectoderm1.46e-0995
gray matter6.17e-0934
regional part of brain2.34e-0846
brain8.81e-0847
future brain8.81e-0847
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