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FFCP PHASE1:Mm9::chr11:93905438..93905450,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=70834
|EntrezGene=70834
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q5NC72
|UniProt=Q5NC72
|association_with_transcript=6bp_to_ENSMUST00000132079_5end
|association_with_transcript=6bp_to_ENSMUST00000132079_5end
|cluster_id=chr11:93905438..93905450,+
|description=CAGE_peak_7_at_Spag9_5end
|description=CAGE_peak_7_at_Spag9_5end
|id=chr11:93905438..93905450,+
|id=chr11:93905438..93905450,+
|ontology_enrichment_celltype=CL:0000540!1.54e-10!33;CL:0000047!1.54e-10!33;CL:0000031!1.54e-10!33;CL:0000404!1.54e-10!33;CL:0000117!3.23e-10!23;CL:0000337!3.23e-10!23;CL:0000221!1.32e-07!44;CL:0000133!1.32e-07!44;CL:0000393!1.37e-07!39;CL:0000211!1.37e-07!39;CL:0002319!3.64e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,3.57e-13,23;CL:0000337,3.57e-13,23;CL:0000540,1.89e-09,33;CL:0000047,1.89e-09,33;CL:0000031,1.89e-09,33;CL:0000404,1.89e-09,33;CL:0000393,1.80e-07,39;CL:0000211,1.80e-07,39;CL:0002610,2.34e-07,3;CL:0000221,3.05e-07,44;CL:0000133,3.05e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.92e-25!71;UBERON:0003075!2.92e-25!71;UBERON:0007284!2.92e-25!71;UBERON:0004121!3.57e-25!102;UBERON:0000924!3.57e-25!102;UBERON:0006601!3.57e-25!102;UBERON:0001017!1.30e-22!73;UBERON:0005743!1.30e-22!73;UBERON:0000073!1.38e-22!75;UBERON:0001016!1.38e-22!75;UBERON:0000033!1.68e-21!63;UBERON:0001049!1.16e-19!52;UBERON:0005068!1.16e-19!52;UBERON:0006241!1.16e-19!52;UBERON:0007135!1.16e-19!52;UBERON:0000955!5.18e-19!50;UBERON:0006238!5.18e-19!50;UBERON:0002616!2.42e-18!49;UBERON:0003056!3.14e-17!49;UBERON:0003080!2.12e-14!40;UBERON:0002020!3.37e-14!34;UBERON:0002780!1.11e-13!39;UBERON:0001890!1.11e-13!39;UBERON:0006240!1.11e-13!39;UBERON:0002791!1.34e-11!29;UBERON:0003528!1.34e-11!29;UBERON:0001893!1.34e-11!29;UBERON:0000153!6.08e-11!94;UBERON:0007811!1.38e-10!86;UBERON:0002021!7.29e-08!10;UBERON:0000411!7.29e-08!10;UBERON:0001950!7.29e-08!10;UBERON:0000956!3.23e-07!21;UBERON:0001869!3.23e-07!21;UBERON:0000203!3.23e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.37e-36,54;UBERON:0001017,1.93e-33,73;UBERON:0001016,2.67e-32,75;UBERON:0001049,2.87e-32,52;UBERON:0005068,2.87e-32,52;UBERON:0006241,2.87e-32,52;UBERON:0007135,2.87e-32,52;UBERON:0002346,8.23e-32,64;UBERON:0003075,8.23e-32,64;UBERON:0007284,8.23e-32,64;UBERON:0004121,1.42e-29,95;UBERON:0000924,1.42e-29,95;UBERON:0006601,1.42e-29,95;UBERON:0000955,2.85e-29,47;UBERON:0006238,2.85e-29,47;UBERON:0010371,1.42e-28,73;UBERON:0002616,1.00e-27,46;UBERON:0010314,1.36e-23,92;UBERON:0003080,5.87e-23,40;UBERON:0002020,9.80e-23,34;UBERON:0003056,1.51e-22,49;UBERON:0002780,2.62e-21,39;UBERON:0001890,2.62e-21,39;UBERON:0006240,2.62e-21,39;UBERON:0003528,3.22e-20,29;UBERON:0002791,3.22e-20,29;UBERON:0001893,3.22e-20,29;UBERON:0002021,1.88e-18,10;UBERON:0000411,1.88e-18,10;UBERON:0001950,1.88e-18,10;UBERON:0002619,3.86e-12,17;UBERON:0000956,2.11e-11,21;UBERON:0001869,2.11e-11,21;UBERON:0000203,2.11e-11,21;UBERON:0000025,3.53e-11,114;UBERON:0002420,7.57e-11,8;UBERON:0007245,7.57e-11,8;UBERON:0010009,7.57e-11,8;UBERON:0010011,7.57e-11,8;UBERON:0000454,7.57e-11,8;UBERON:0004111,8.64e-11,122;UBERON:0003076,1.34e-09,12;UBERON:0003057,1.34e-09,12;UBERON:0002950,9.90e-09,4;UBERON:0001891,9.90e-09,4;UBERON:0009616,9.90e-09,4;UBERON:0010286,9.90e-09,4;UBERON:0000483,1.82e-07,174;UBERON:0011216,1.96e-07,194;UBERON:0004684,2.34e-07,3;UBERON:0002275,2.34e-07,3;UBERON:0000119,2.78e-07,176
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0.286533439938757,0,0.404632921719196,1.05798195854407,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.270011876663381,0.630974884054146,0.856952953211411,0.662605622854841,0.367472397644862,0.287536413054709,0,5.50579404996943,5.2351808614927,7.0659005297872,1.45074916503213,1.28082701043374,1.04182674111352,2.23346399201105,5.6276261003168,2.29197371665215,2.06240009831567,2.56269025438385,1.1183966749518,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,1.40843419776681,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.346970653532272,1.21786191324856,0,0.452167921657868,0.823120949949934,0.251333182659351,0,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,3.80615036115011,2.51336048176146,0,0,0,0,6.44099749440738,4.11750542536764,0.753926112677186,5.73620256634512,8.18289463457058,4.36354893575076,5.353961681236,0.203678727700633,0.124406970610093,0.252722758433675,0.841767423545896,0.520481771850815,0.229902104433473,0.540186389416048,0.150704817835715,1.2246569847239,1.0249097622788,0.749613796477831,1.03481348295606,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.590292695242212,0.154267112887378,0.465067889500816,0.268273401399619,1.05088808130453,0.493679549740441,0,0.243206428637567,0.146199987425332,0.219550115291051,0.402619256281115,3.57492912559016,0.720332286654991,0.330418782983798,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0.610953983535943,0.193952487167626,0.280543279561274,0.442655759869801,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0.335012514883631,0.476087281772027,0,0.315270288212382,0.44292937929755,0.159454768657487,0,0,0.144649058581512,0,0,0,0.275936746304732,5.29816946959713,5.62616095642575,0,0,0.315508219416257,0.780877488593277,1.07711698866399,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0.790575555893047,2.57057053137446,0.283880170416537,0.534196811001766,0.81443479676788,0.989820737835213,0,0.242780636154981,0,0.377210159511796,0,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,0,2.04263763452273,0.18006109403131,0.258717367565509,0.214337035031592,0.886701168211368,0.535106452806212,1.15184314421485,0,0,0,0,0.32977250588296,0,0.241251699712623,0.238744688006273,0.164140899745061,0,6.30446026835733,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0.269728692769641,0.247960367176008,0,0,0,0,0.448549638131936,0.496375471371293,0.388902376688095,0.516639293910924,2.02747350588934,0.704143431874524,0.781226309063701,1.25831213310853,0.483168241652012,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0,0,1.6942555278512,6.44455331110048,1.14579102687879,2.06223818812425,2.05524755931193,2.2661816921691,5.40018000185445,4.5032120322422,6.34399372577886,3.62432218226274,0.207574695168353,0,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.44449345560323,0.412070114477788,0,0.505394423527595,0.25347929989024,0.754505365544305,0.37456602987953,0.192075457214608,0.287177344778066,0.476293691283074,0.579421629724277,0.578727661391115,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.290692833264657,0.376437521661322,0.169229215783353,0.365855945745545,0.263069711437843,0,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0.771626443924566,0.249810577937946,0.467863216890817,0.644613162144895,0.191288332068843,0,0.231867835620421
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0.286533439938757,0,0.404632921719196,1.05798195854407,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.270011876663381,0.630974884054146,0.856952953211411,0.662605622854841,0.367472397644862,0.287536413054709,0,5.50579404996943,5.2351808614927,7.0659005297872,1.45074916503213,1.28082701043374,1.04182674111352,2.23346399201105,5.6276261003168,2.29197371665215,2.06240009831567,2.56269025438385,1.1183966749518,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,1.40843419776681,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.346970653532272,1.21786191324856,0,0.452167921657868,0.823120949949934,0.251333182659351,0,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,3.80615036115011,2.51336048176146,0,0,0,0,6.44099749440738,4.11750542536764,0.753926112677186,5.73620256634512,8.18289463457058,4.36354893575076,5.353961681236,0.203678727700633,0.124406970610093,0.252722758433675,0.841767423545896,0.520481771850815,0.229902104433473,0.540186389416048,0.150704817835715,1.2246569847239,1.0249097622788,0.749613796477831,1.03481348295606,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.590292695242212,0.154267112887378,0.465067889500816,0.268273401399619,1.05088808130453,0.493679549740441,0,0.243206428637567,0.146199987425332,0.219550115291051,0.402619256281115,3.57492912559016,0.720332286654991,0.330418782983798,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0.610953983535943,0.193952487167626,0.280543279561274,0.442655759869801,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0.335012514883631,0.476087281772027,0,0.315270288212382,0.44292937929755,0.159454768657487,0,0,0.144649058581512,0,0,0,0.275936746304732,5.29816946959713,5.62616095642575,0,0,0.315508219416257,0.780877488593277,1.07711698866399,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0.790575555893047,2.57057053137446,0.283880170416537,0.534196811001766,0.81443479676788,0.989820737835213,0,0.242780636154981,0,0.377210159511796,0,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,0,2.04263763452273,0.18006109403131,0.258717367565509,0.214337035031592,0.886701168211368,0.535106452806212,1.15184314421485,0,0,0,0,0.32977250588296,0,0.241251699712623,0.238744688006273,0.164140899745061,0,6.30446026835733,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0.269728692769641,0.247960367176008,0,0,0,0,0.448549638131936,0.496375471371293,0.388902376688095,0.516639293910924,2.02747350588934,0.704143431874524,0.781226309063701,1.25831213310853,0.483168241652012,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0,0,1.6942555278512,6.44455331110048,1.14579102687879,2.06223818812425,2.05524755931193,2.2661816921691,5.40018000185445,4.5032120322422,6.34399372577886,3.62432218226274,0.207574695168353,0,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.44449345560323,0.412070114477788,0,0.505394423527595,0.25347929989024,0.754505365544305,0.37456602987953,0.192075457214608,0.287177344778066,0.476293691283074,0.579421629724277,0.578727661391115,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.290692833264657,0.376437521661322,0.169229215783353,0.365855945745545,0.263069711437843,0,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0.771626443924566,0.249810577937946,0.467863216890817,0.644613162144895,0.191288332068843,0,0.231867835620421
|short_description=p7@Spag9
|short_description=p7@Spag9
}}
}}

Latest revision as of 23:32, 25 September 2015

Short description:p7@Spag9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Spag9_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 6bp_to_ENSMUST00000132079_5end
EntrezGene:Spag9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Spag9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.44
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D55.74
cortex, neonate N30.CNhs11107.1392-42F28.18
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A35.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C96.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.37e-3654
central nervous system1.93e-3373
nervous system2.67e-3275
neural tube2.87e-3252
neural rod2.87e-3252
future spinal cord2.87e-3252
neural keel2.87e-3252
neurectoderm8.23e-3264
neural plate8.23e-3264
presumptive neural plate8.23e-3264
ectoderm-derived structure1.42e-2995
ectoderm1.42e-2995
presumptive ectoderm1.42e-2995
brain2.85e-2947
future brain2.85e-2947
ecto-epithelium1.42e-2873
regional part of brain1.00e-2746
structure with developmental contribution from neural crest1.36e-2392
anterior neural tube5.87e-2340
gray matter9.80e-2334
pre-chordal neural plate1.51e-2249
regional part of forebrain2.62e-2139
forebrain2.62e-2139
future forebrain2.62e-2139
brain grey matter3.22e-2029
regional part of telencephalon3.22e-2029
telencephalon3.22e-2029
occipital lobe1.88e-1810
visual cortex1.88e-1810
neocortex1.88e-1810
regional part of cerebral cortex3.86e-1217
cerebral cortex2.11e-1121
cerebral hemisphere2.11e-1121
pallium2.11e-1121
tube3.53e-11114
basal ganglion7.57e-118
nuclear complex of neuraxis7.57e-118
aggregate regional part of brain7.57e-118
collection of basal ganglia7.57e-118
cerebral subcortex7.57e-118
anatomical conduit8.64e-11122
posterior neural tube1.34e-0912
chordal neural plate1.34e-0912
regional part of midbrain9.90e-094
midbrain9.90e-094
presumptive midbrain9.90e-094
midbrain neural tube9.90e-094
epithelium1.82e-07174
organ system subdivision1.96e-07194
raphe nuclei2.34e-073
reticular formation2.34e-073
cell layer2.78e-07176
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