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FFCP PHASE1:Mm9::chr11:68903245..68903266,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=22318
|EntrezGene=22318
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=137bp_to_ENSMUST00000146847_5end
|association_with_transcript=137bp_to_ENSMUST00000146847_5end
|cluster_id=chr11:68903245..68903266,+
|description=CAGE_peak_4_at_Vamp2_5end
|description=CAGE_peak_4_at_Vamp2_5end
|id=chr11:68903245..68903266,+
|id=chr11:68903245..68903266,+
|ontology_enrichment_celltype=CL:0000221!6.19e-13!44;CL:0000133!6.19e-13!44;CL:0000540!7.12e-13!33;CL:0000047!7.12e-13!33;CL:0000031!7.12e-13!33;CL:0000404!7.12e-13!33;CL:0002319!1.00e-12!43;CL:0000117!2.20e-12!23;CL:0000337!2.20e-12!23;CL:0000055!3.42e-11!50;CL:0000393!7.71e-11!39;CL:0000211!7.71e-11!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.82e-18,23;CL:0000337,1.82e-18,23;CL:0000221,8.35e-16,44;CL:0000133,8.35e-16,44;CL:0002319,1.77e-15,43;CL:0000540,4.57e-15,33;CL:0000047,4.57e-15,33;CL:0000031,4.57e-15,33;CL:0000404,4.57e-15,33;CL:0000393,4.04e-12,39;CL:0000211,4.04e-12,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.75e-28!73;UBERON:0005743!1.75e-28!73;UBERON:0000073!2.77e-27!75;UBERON:0001016!2.77e-27!75;UBERON:0004121!3.33e-26!102;UBERON:0000924!3.33e-26!102;UBERON:0006601!3.33e-26!102;UBERON:0000033!2.30e-23!63;UBERON:0001049!3.27e-23!52;UBERON:0005068!3.27e-23!52;UBERON:0006241!3.27e-23!52;UBERON:0007135!3.27e-23!52;UBERON:0000955!2.63e-22!50;UBERON:0006238!2.63e-22!50;UBERON:0002616!1.49e-21!49;UBERON:0002346!8.08e-21!71;UBERON:0003075!8.08e-21!71;UBERON:0007284!8.08e-21!71;UBERON:0002020!4.16e-19!34;UBERON:0003080!1.07e-16!40;UBERON:0003056!1.80e-16!49;UBERON:0002791!3.23e-16!29;UBERON:0003528!3.23e-16!29;UBERON:0001893!3.23e-16!29;UBERON:0002780!4.34e-16!39;UBERON:0001890!4.34e-16!39;UBERON:0006240!4.34e-16!39;UBERON:0000956!7.71e-12!21;UBERON:0001869!7.71e-12!21;UBERON:0000203!7.71e-12!21;UBERON:0007811!1.05e-10!86;UBERON:0004111!2.56e-10!122;UBERON:0002619!3.57e-10!17;UBERON:0000025!1.13e-09!114;UBERON:0000153!1.59e-09!94;UBERON:0002021!1.18e-07!10;UBERON:0000411!1.18e-07!10;UBERON:0001950!1.18e-07!10;UBERON:0003076!3.41e-07!12;UBERON:0003057!3.41e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.47e-38,73;UBERON:0000073,1.64e-36,54;UBERON:0001016,1.83e-36,75;UBERON:0001049,2.62e-34,52;UBERON:0005068,2.62e-34,52;UBERON:0006241,2.62e-34,52;UBERON:0007135,2.62e-34,52;UBERON:0004121,2.59e-33,95;UBERON:0000924,2.59e-33,95;UBERON:0006601,2.59e-33,95;UBERON:0002346,1.64e-32,64;UBERON:0003075,1.64e-32,64;UBERON:0007284,1.64e-32,64;UBERON:0000955,8.59e-30,47;UBERON:0006238,8.59e-30,47;UBERON:0002020,5.38e-29,34;UBERON:0002616,1.19e-28,46;UBERON:0010371,2.58e-28,73;UBERON:0003528,1.82e-24,29;UBERON:0002791,1.82e-24,29;UBERON:0001893,1.82e-24,29;UBERON:0003080,3.66e-24,40;UBERON:0010314,6.43e-24,92;UBERON:0002780,3.19e-23,39;UBERON:0001890,3.19e-23,39;UBERON:0006240,3.19e-23,39;UBERON:0003056,4.07e-22,49;UBERON:0000956,1.30e-17,21;UBERON:0001869,1.30e-17,21;UBERON:0000203,1.30e-17,21;UBERON:0002619,5.19e-15,17;UBERON:0002021,4.39e-11,10;UBERON:0000411,4.39e-11,10;UBERON:0001950,4.39e-11,10;UBERON:0004111,5.22e-11,122;UBERON:0003076,2.29e-10,12;UBERON:0003057,2.29e-10,12;UBERON:0000025,2.37e-10,114;UBERON:0002420,6.13e-08,8;UBERON:0007245,6.13e-08,8;UBERON:0010009,6.13e-08,8;UBERON:0010011,6.13e-08,8;UBERON:0000454,6.13e-08,8
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|phase1_expression=0.960893082628764,0.348975407639361,0,0,0,0,0.467225281191051,0.258246646883153,0.563154888606667,0.468129052643987,0,0.159544317990673,0.171200729931206,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0.685572168028694,0,4.16712121740242,0,0,0.319984845586813,0,0.57423196411502,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0.418531630736908,0,0.523523743973798,0,1.36609096991689,0.485510353031154,0.125896817975577,0.304130793658544,0.550640256485045,1.56478268869608,1.30815093828268,1.31811709640683,1.74986909166855,0.699932108126813,0,0.335565212115473,0.725362142011344,0.336093799142464,0.771778308107841,0.286533439938757,1.03134418455488,2.02316460859598,3.1739458756322,3.1691570175309,0,0,0.899899717281399,0.988866362566974,0,1.49800055259202,5.76327457982332,2.07379224616955,4.45519596494579,1.05162480675691,6.56997264128748,4.41737081903227,1.5923803897944,2.20444583341944,1.83843757322004,3.30347642998166,15.0671058940522,12.9029487935245,3.42904348098504,4.57438218012048,2.08365348222704,6.70039197603314,6.75315132038016,10.8486755921535,5.00868595305235,7.68807076315156,5.40558392893372,0.075726193333184,0.529000920747499,0.289864488701678,0.860423876981386,0,0,0,0,1.82577746171277,1.87473354835864,1.03914401841148,0.35333957451034,1.12674735821344,0,0,0,0,0,0,0.79928715803342,0.517875767294343,0.445326417194474,0.173485326766136,0.304465478312141,0.691846491768175,0.60289056221049,1.41106448562846,0.125666591329675,0.247194967734374,0.722996784599558,0,1.29413479957927,0.441683036920787,0.484875253135222,0,6.73395833126558,3.97948742945565,0.255457055208591,0,0,0.254140454146129,7.18995069143149,8.23501085073528,3.14135880282161,13.210648334613,8.43861009190091,11.6361304953354,8.27430441645564,0.509196819251581,0.248813941220186,0.505445516867349,2.52530227063769,0.520481771850815,0.229902104433473,0.360124259610698,0.753524089178575,0.816437989815934,1.0249097622788,1.3118241438362,3.3631438196072,0,0,0.351902248327898,0.876782929710299,0.278047249225598,1.0447564995665,0.823128545631774,0,0,0.51469581422943,0,0.828503090142008,0.703578179943289,0.540186184383045,1.18372367792605,0.393528463494808,0.771335564436891,0.697601834251224,0.804820204198858,0.700592054203017,0.658239399653922,1.31333971263276,0.810688095458557,1.46199987425332,1.53685080703735,0.939444931322602,9.46304768538573,2.6755199218614,0,0,0.213288250535234,0.696710015581316,0.128867461322093,0.80673409849337,0.444756087689741,0.380451252225118,0,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0.898819408654221,0.432276099749388,0.398282546508734,0.758671603812327,0.456994050438915,1.1270773567308,1.22190796707189,0.193952487167626,0.771494018793504,0.822074982615345,0.590440591918409,0.784993639206874,0.616985819609003,0.592905254174298,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,0,0.372140947668503,0,0.505157755894224,0.358794827043824,0,0.554259570499814,0.189491411770485,0.488894929326078,0.169745085775188,0.938760993154008,0.335012514883631,0.714130922658041,0,0.157635144106191,1.10732344824387,0.159454768657487,1.14704320301017,0.690739927463582,0.867894351489069,0,0,0.983528546038072,0.551873492609465,4.49541651965817,5.62616095642575,0.163934945376675,0.504941854408746,0.315508219416257,1.56175497718655,1.93881057959519,0.955875191810208,0.891194696329576,0.566153061577665,1.61924280669958,1.75353514746787,0.790575555893047,15.4234231882467,0.425820255624806,0.178065603667255,0.488660878060728,0.989820737835213,0,0.728341908464944,0,0.754420319023592,0,0.307435147943927,0.258428293168221,0.727067458955011,1.42598951353889,0,0,0,3.40439605753788,0.18006109403131,0.388076051348264,0.428674070063185,0.709360934569094,1.60531935841864,0.493647061806363,2.74018454203139,0.469343416127421,1.48282449604674,0.661585194164886,1.48397627647332,0.968786560175433,0.784068024066026,0.596861720015682,0.164140899745061,0,6.67531087237835,0,0,0.555583582109135,0.188368457004691,0.410082683163076,0.228778173206523,0,0,0.138199973804424,2.86401185404534,0.474503990371703,0.406638934253697,0.324016022465404,1.25452977608681,1.09181281873089,0.674321731924103,0.495920734352016,0.26175594198403,0.388844919875379,2.4853572523477,2.81846469342095,0.149516546043979,0.66183396182839,0.583353565032143,0.904118764344118,0.506868376472335,1.40828686374905,0.13020438484395,0.314578033277133,0.724752362478018,0,0,0.405450430580328,0.308132871494482,0.25984164595559,0,0.198681354781265,0.120195449519969,0.443068581523732,0.302899349844443,0.0762068066549998,0.302478555410522,0.194915761479505,0.384847366561318,0.233753804363138,1.81384306892169,0.443971906748129,0.358855426437903,0.335769232728157,1.73870634628971,0.750729901804728,0.183151624267265,0.214368379079066,0,7.34177395402186,10.5874804396651,13.1765968091061,11.6860163993708,8.22099023724771,15.8632718451837,14.1754725048679,9.45674526770863,2.71885445390523,9.83744592328458,0.103787347584177,0,0.512200817262403,0.486213434136588,0.838452650511929,0.919217542250071,0.666740183404846,1.64828045791115,0,1.26348605881899,1.01391719956096,0.943131706930381,1.21733959710847,2.43295579138503,1.7230640686684,1.42888107384922,0.927074607558844,0.77163688185482,0.824171801606613,1.03039244094078,1.37147700954166,0.887379030796687,1.43061713968393,0.872078499793971,1.59985946706062,0.592302255241736,1.09756783723664,0.526139422875686,0.543216455383447,0,1.30498519936592,0.689531376628944,0.409231043169689,0.929621047115796,0.192906610981141,1.74867404556562,0.467863216890817,0.859484216193193,1.14772999241306,1.10295709559758,0.927471342481686
|short_description=p4@Vamp2
|short_description=p4@Vamp2
}}
}}

Latest revision as of 23:42, 1 October 2015

Short description:p4@Vamp2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Vamp2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 137bp_to_ENSMUST00000146847_5end
EntrezGene:Vamp2
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Vamp2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.46
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.90
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.85
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A47.19
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F13.14
cortex, adult.CNhs10473.12-14D513.21
cortex, neonate N30.CNhs11107.1392-42F28.44
diencephalon, adult.CNhs10482.20-12F211.64
diencephalon, neonate N30.CNhs11201.1388-42B28.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E89.46
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A35.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I915.42
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C96.68
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.82e-1823
neuroblast (sensu Vertebrata)1.82e-1823
ectodermal cell8.35e-1644
neurectodermal cell8.35e-1644
neural cell1.77e-1543
neuron4.57e-1533
neuronal stem cell4.57e-1533
neuroblast4.57e-1533
electrically signaling cell4.57e-1533
electrically responsive cell4.04e-1239
electrically active cell4.04e-1239

Uber anatomy
Ontology termp-valuen
central nervous system4.47e-3873
regional part of nervous system1.64e-3654
nervous system1.83e-3675
neural tube2.62e-3452
neural rod2.62e-3452
future spinal cord2.62e-3452
neural keel2.62e-3452
ectoderm-derived structure2.59e-3395
ectoderm2.59e-3395
presumptive ectoderm2.59e-3395
neurectoderm1.64e-3264
neural plate1.64e-3264
presumptive neural plate1.64e-3264
brain8.59e-3047
future brain8.59e-3047
gray matter5.38e-2934
regional part of brain1.19e-2846
ecto-epithelium2.58e-2873
brain grey matter1.82e-2429
regional part of telencephalon1.82e-2429
telencephalon1.82e-2429
anterior neural tube3.66e-2440
structure with developmental contribution from neural crest6.43e-2492
regional part of forebrain3.19e-2339
forebrain3.19e-2339
future forebrain3.19e-2339
pre-chordal neural plate4.07e-2249
cerebral cortex1.30e-1721
cerebral hemisphere1.30e-1721
pallium1.30e-1721
regional part of cerebral cortex5.19e-1517
occipital lobe4.39e-1110
visual cortex4.39e-1110
neocortex4.39e-1110
anatomical conduit5.22e-11122
posterior neural tube2.29e-1012
chordal neural plate2.29e-1012
tube2.37e-10114
basal ganglion6.13e-088
nuclear complex of neuraxis6.13e-088
aggregate regional part of brain6.13e-088
collection of basal ganglia6.13e-088
cerebral subcortex6.13e-088
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