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FFCP PHASE1:Mm9::chr11:42234760..42234786,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14401
|EntrezGene=14401
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000136050_5end
|association_with_transcript=0bp_to_ENSMUST00000136050_5end
|cluster_id=chr11:42234760..42234786,+
|description=CAGE_peak_1_at_Gabrb2_5end
|description=CAGE_peak_1_at_Gabrb2_5end
|id=chr11:42234760..42234786,+
|id=chr11:42234760..42234786,+
|ontology_enrichment_celltype=CL:0000117!3.77e-12!23;CL:0000337!3.77e-12!23;CL:0000540!1.87e-07!33;CL:0000047!1.87e-07!33;CL:0000031!1.87e-07!33;CL:0000404!1.87e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,5.80e-15,23;CL:0000337,5.80e-15,23;CL:0000540,1.52e-08,33;CL:0000047,1.52e-08,33;CL:0000031,1.52e-08,33;CL:0000404,1.52e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!6.42e-22!63;UBERON:0001049!3.32e-21!52;UBERON:0005068!3.32e-21!52;UBERON:0006241!3.32e-21!52;UBERON:0007135!3.32e-21!52;UBERON:0000955!5.19e-21!50;UBERON:0006238!5.19e-21!50;UBERON:0002616!2.42e-20!49;UBERON:0002346!1.49e-19!71;UBERON:0003075!1.49e-19!71;UBERON:0007284!1.49e-19!71;UBERON:0002020!2.87e-19!34;UBERON:0003056!6.67e-19!49;UBERON:0001017!1.32e-18!73;UBERON:0005743!1.32e-18!73;UBERON:0000073!3.50e-18!75;UBERON:0001016!3.50e-18!75;UBERON:0003080!2.61e-17!40;UBERON:0002791!4.96e-17!29;UBERON:0003528!4.96e-17!29;UBERON:0001893!4.96e-17!29;UBERON:0002780!1.33e-16!39;UBERON:0001890!1.33e-16!39;UBERON:0006240!1.33e-16!39;UBERON:0004121!8.37e-16!102;UBERON:0000924!8.37e-16!102;UBERON:0006601!8.37e-16!102;UBERON:0000956!2.69e-12!21;UBERON:0001869!2.69e-12!21;UBERON:0000203!2.69e-12!21;UBERON:0002619!9.14e-11!17;UBERON:0007811!4.99e-10!86;UBERON:0000153!8.14e-09!94;UBERON:0002021!1.26e-08!10;UBERON:0000411!1.26e-08!10;UBERON:0001950!1.26e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.95e-28,54;UBERON:0001049,2.94e-26,52;UBERON:0005068,2.94e-26,52;UBERON:0006241,2.94e-26,52;UBERON:0007135,2.94e-26,52;UBERON:0002346,5.33e-25,64;UBERON:0003075,5.33e-25,64;UBERON:0007284,5.33e-25,64;UBERON:0002020,5.56e-24,34;UBERON:0000955,2.84e-23,47;UBERON:0006238,2.84e-23,47;UBERON:0001017,1.12e-22,73;UBERON:0002616,1.89e-22,46;UBERON:0003056,1.55e-21,49;UBERON:0001016,1.69e-21,75;UBERON:0003528,3.81e-21,29;UBERON:0002791,3.81e-21,29;UBERON:0001893,3.81e-21,29;UBERON:0003080,9.82e-21,40;UBERON:0010371,3.67e-20,73;UBERON:0002780,7.55e-20,39;UBERON:0001890,7.55e-20,39;UBERON:0006240,7.55e-20,39;UBERON:0004121,7.59e-18,95;UBERON:0000924,7.59e-18,95;UBERON:0006601,7.59e-18,95;UBERON:0000956,3.79e-15,21;UBERON:0001869,3.79e-15,21;UBERON:0000203,3.79e-15,21;UBERON:0002619,3.28e-13,17;UBERON:0010314,4.83e-13,92;UBERON:0002021,1.66e-10,10;UBERON:0000411,1.66e-10,10;UBERON:0001950,1.66e-10,10;UBERON:0002420,3.70e-07,8;UBERON:0007245,3.70e-07,8;UBERON:0010009,3.70e-07,8;UBERON:0010011,3.70e-07,8;UBERON:0000454,3.70e-07,8
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1552597658035,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31811709640683,3.4997381833371,0,0,0,0,0,0,0,0,8.49729135610311,16.9277113367051,6.97214543856797,0,0,0,0,0.7104801149461,0.299600110518405,0,4.76972216618997,3.64516033495565,3.15487442027073,3.14216082844184,4.63823935998388,6.24703075996266,4.69642807989358,1.83843757322004,101.306610519438,82.1029583887757,97.0793290179459,8.04506355154182,9.5147149346506,7.8137005583514,38.2480708631892,54.0252105630413,48.7426410408024,14.4368006882097,11.5321061447273,6.15118171223492,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,2.52799956237153,0,0,0,0.704217098883403,0,0,0,0,0,0,1.82694207550496,0,0,1.04091196059682,0.608930956624282,0,0.452167921657868,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0.883366073841574,1.45462575940567,0,114.184510834503,107.027267181676,0,0,0,0,96.4651717767058,64.965085600245,33.5497120141348,95.7772004259443,81.3175154310451,93.0890439626829,78.6870125878625,1.01839363850316,0.124406970610093,0,3.15662783829711,3.513251959993,0.919608417733892,0.180062129805349,1.80845781402858,1.15662048557257,3.33095672740609,2.62364828767241,8.79591460512653,0,0.756424320671277,0.527853372491847,0.876782929710299,0,0,0.61734640922383,0.796137067273973,0,0,0,0.621377317606506,0,0.900310307305074,1.18372367792605,0.590292695242212,0.617068451549513,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0,0,0,0,0.134206418760372,62.876694620674,17.5966887168576,0,0,0.853153002140936,1.85789337488351,1.03093969057675,1.4117846723634,0.667134131534611,0.760902504450237,0,0,0.754005626400808,0.397912944082302,0.19496408711912,0,0,0,0,0.456994050438915,0,0.407302655690628,0,0.140271639780637,0.126473074248515,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.678980343100753,0.234690248288502,0.335012514883631,0,0.195133647857799,0,0,0.159454768657487,0,0.518054945597687,0,0,0,0.983528546038072,0,33.5550733074485,37.1561046497284,0,1.00988370881749,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0,0.395287777946524,55.2672664245508,2.2710413633323,1.24645922567079,2.11753047159649,0.494910368917606,0,1.94224508923985,0.302323556964751,0.565815239267694,0,1.22974059177571,0.516856586336442,1.45413491791002,1.06949213515416,0,0,0,9.19186935535228,1.8006109403131,0,0,1.59606210278046,1.07021290561242,0.658196082408484,0.304464949114599,0,0,0,0,0.484393280087717,0.482503399425247,0,0,0.291480836629851,17.9862542950194,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0.954670618015114,2.53068794864908,3.25311147402958,2.80813886136683,3.13632444021703,2.83871332870031,2.15782954215713,1.98368293740806,1.30877970992015,0.259229946583586,0,0,0.149516546043979,1.15820943319968,2.13896307178452,5.16639293910924,7.60302564708502,4.69428954583016,0.781226309063701,0.524296722128554,0,0,0,0.405450430580328,0.718976700153791,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,1.12609485270709,1.83151624267265,0.214368379079066,0,90.9250466613477,104.493828687129,89.9445956099853,82.3176743426264,102.077295445826,103.488963942389,99.2283075340755,124.738973293109,124.614162470656,123.744714508685,0.415149390336707,1.59609949360412,3.24393850932855,4.86213434136588,1.04806581313991,2.94149613520023,5.11167473943715,6.59312183164461,4.1719497246936,5.05394423527595,6.33698249725599,5.47016390019621,5.3375659257833,5.05798703998467,4.7671439233159,4.28664322154766,3.59241410429052,3.6652751888104,2.88460130562315,5.88795680537589,3.42869252385415,3.90446773550542,6.91464950847231,4.36039249896986,4.6113596403512,3.46919892355874,7.3171189149109,5.5244639401947,4.34573164306758,4.48913817326191,2.72860541685601,3.84167481264697,4.09231043169689,4.49316839439301,3.47231899766054,7.74412791607632,4.91256377735358,4.72716318906256,0.956441660344217,1.76473135295612,0.695603506861264
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1552597658035,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31811709640683,3.4997381833371,0,0,0,0,0,0,0,0,8.49729135610311,16.9277113367051,6.97214543856797,0,0,0,0,0.7104801149461,0.299600110518405,0,4.76972216618997,3.64516033495565,3.15487442027073,3.14216082844184,4.63823935998388,6.24703075996266,4.69642807989358,1.83843757322004,101.306610519438,82.1029583887757,97.0793290179459,8.04506355154182,9.5147149346506,7.8137005583514,38.2480708631892,54.0252105630413,48.7426410408024,14.4368006882097,11.5321061447273,6.15118171223492,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,2.52799956237153,0,0,0,0.704217098883403,0,0,0,0,0,0,1.82694207550496,0,0,1.04091196059682,0.608930956624282,0,0.452167921657868,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0.883366073841574,1.45462575940567,0,114.184510834503,107.027267181676,0,0,0,0,96.4651717767058,64.965085600245,33.5497120141348,95.7772004259443,81.3175154310451,93.0890439626829,78.6870125878625,1.01839363850316,0.124406970610093,0,3.15662783829711,3.513251959993,0.919608417733892,0.180062129805349,1.80845781402858,1.15662048557257,3.33095672740609,2.62364828767241,8.79591460512653,0,0.756424320671277,0.527853372491847,0.876782929710299,0,0,0.61734640922383,0.796137067273973,0,0,0,0.621377317606506,0,0.900310307305074,1.18372367792605,0.590292695242212,0.617068451549513,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0,0,0,0,0.134206418760372,62.876694620674,17.5966887168576,0,0,0.853153002140936,1.85789337488351,1.03093969057675,1.4117846723634,0.667134131534611,0.760902504450237,0,0,0.754005626400808,0.397912944082302,0.19496408711912,0,0,0,0,0.456994050438915,0,0.407302655690628,0,0.140271639780637,0.126473074248515,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.678980343100753,0.234690248288502,0.335012514883631,0,0.195133647857799,0,0,0.159454768657487,0,0.518054945597687,0,0,0,0.983528546038072,0,33.5550733074485,37.1561046497284,0,1.00988370881749,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0,0.395287777946524,55.2672664245508,2.2710413633323,1.24645922567079,2.11753047159649,0.494910368917606,0,1.94224508923985,0.302323556964751,0.565815239267694,0,1.22974059177571,0.516856586336442,1.45413491791002,1.06949213515416,0,0,0,9.19186935535228,1.8006109403131,0,0,1.59606210278046,1.07021290561242,0.658196082408484,0.304464949114599,0,0,0,0,0.484393280087717,0.482503399425247,0,0,0.291480836629851,17.9862542950194,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0.954670618015114,2.53068794864908,3.25311147402958,2.80813886136683,3.13632444021703,2.83871332870031,2.15782954215713,1.98368293740806,1.30877970992015,0.259229946583586,0,0,0.149516546043979,1.15820943319968,2.13896307178452,5.16639293910924,7.60302564708502,4.69428954583016,0.781226309063701,0.524296722128554,0,0,0,0.405450430580328,0.718976700153791,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,1.12609485270709,1.83151624267265,0.214368379079066,0,90.9250466613477,104.493828687129,89.9445956099853,82.3176743426264,102.077295445826,103.488963942389,99.2283075340755,124.738973293109,124.614162470656,123.744714508685,0.415149390336707,1.59609949360412,3.24393850932855,4.86213434136588,1.04806581313991,2.94149613520023,5.11167473943715,6.59312183164461,4.1719497246936,5.05394423527595,6.33698249725599,5.47016390019621,5.3375659257833,5.05798703998467,4.7671439233159,4.28664322154766,3.59241410429052,3.6652751888104,2.88460130562315,5.88795680537589,3.42869252385415,3.90446773550542,6.91464950847231,4.36039249896986,4.6113596403512,3.46919892355874,7.3171189149109,5.5244639401947,4.34573164306758,4.48913817326191,2.72860541685601,3.84167481264697,4.09231043169689,4.49316839439301,3.47231899766054,7.74412791607632,4.91256377735358,4.72716318906256,0.956441660344217,1.76473135295612,0.695603506861264
|short_description=p1@Gabrb2
|short_description=p1@Gabrb2
}}
}}

Latest revision as of 12:31, 1 October 2015

Short description:p1@Gabrb2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gabrb2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000136050_5end
EntrezGene:Gabrb2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gabrb2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C38.50
Mouse Granule cells, donor2.CNhs12357.11731-123E316.93
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.77
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.25
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.70
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3101.31
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F382.10
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D797.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.05
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.51
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E438.25
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E554.03
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I648.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.44
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2114.18
cerebellum, neonate N30.CNhs11135.1395-42I2107.03
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A496.47
corpus striatum, adult.CNhs10487.19-21D864.97
corpus striatum, neonate N00.CNhs11226.630-43F133.55
cortex, adult.CNhs10473.12-14D595.78
cortex, neonate N30.CNhs11107.1392-42F281.32
diencephalon, adult.CNhs10482.20-12F293.09
diencephalon, neonate N30.CNhs11201.1388-42B278.69
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C63.51
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G82.62
eyeball, neonate N16.CNhs11188.777-19A28.80
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E862.88
hippocampus, neonate N00.CNhs11228.627-43G117.60
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C233.56
medulla oblongata, neonate N30.CNhs11200.1396-42A337.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I955.27
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G89.19
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C917.99
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D42.81
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A91.98
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I55.17
testis, embryo E18.CNhs11027.503-18G57.60
testis, neonate N00.CNhs11189.1300-22B74.69
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A190.93
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2104.49
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A389.94
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D782.32
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4102.08
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5103.49
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A699.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7124.74
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8124.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9123.74
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.36
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.32
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.49
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I57.74
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.80e-1523
neuroblast (sensu Vertebrata)5.80e-1523
neuron1.52e-0833
neuronal stem cell1.52e-0833
neuroblast1.52e-0833
electrically signaling cell1.52e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.95e-2854
neural tube2.94e-2652
neural rod2.94e-2652
future spinal cord2.94e-2652
neural keel2.94e-2652
neurectoderm5.33e-2564
neural plate5.33e-2564
presumptive neural plate5.33e-2564
gray matter5.56e-2434
brain2.84e-2347
future brain2.84e-2347
central nervous system1.12e-2273
regional part of brain1.89e-2246
pre-chordal neural plate1.55e-2149
nervous system1.69e-2175
brain grey matter3.81e-2129
regional part of telencephalon3.81e-2129
telencephalon3.81e-2129
anterior neural tube9.82e-2140
ecto-epithelium3.67e-2073
regional part of forebrain7.55e-2039
forebrain7.55e-2039
future forebrain7.55e-2039
ectoderm-derived structure7.59e-1895
ectoderm7.59e-1895
presumptive ectoderm7.59e-1895
cerebral cortex3.79e-1521
cerebral hemisphere3.79e-1521
pallium3.79e-1521
regional part of cerebral cortex3.28e-1317
structure with developmental contribution from neural crest4.83e-1392
occipital lobe1.66e-1010
visual cortex1.66e-1010
neocortex1.66e-1010
basal ganglion3.70e-078
nuclear complex of neuraxis3.70e-078
aggregate regional part of brain3.70e-078
collection of basal ganglia3.70e-078
cerebral subcortex3.70e-078
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