Personal tools

FFCP PHASE1:Mm9::chr11:107776355..107776383,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=140723
|EntrezGene=140723
|HGNC=
|HGNC=
|MCL_coexpression_id=93
|TSSclassifier=NA
|UniProt=Q8VHW4,Q544Q4
|UniProt=Q8VHW4,Q544Q4
|association_with_transcript=0bp_to_ENSMUST00000039071,NM_001199301,uc007mbc.1_5end
|association_with_transcript=0bp_to_ENSMUST00000039071,NM_001199301,uc007mbc.1_5end
|cluster_id=chr11:107776355..107776383,-
|description=CAGE_peak_2_at_Cacng5_5end
|description=CAGE_peak_2_at_Cacng5_5end
|id=chr11:107776355..107776383,-
|id=chr11:107776355..107776383,-
|ontology_enrichment_celltype=CL:0000221!2.06e-18!44;CL:0000133!2.06e-18!44;CL:0002319!5.72e-18!43;CL:0000540!6.50e-16!33;CL:0000047!6.50e-16!33;CL:0000031!6.50e-16!33;CL:0000404!6.50e-16!33;CL:0000117!2.51e-14!23;CL:0000337!2.51e-14!23;CL:0000055!8.12e-13!50;CL:0000393!3.89e-11!39;CL:0000211!3.89e-11!39
|ontology_enrichment_celltype_v019_2=CL:0000221,5.60e-20,44;CL:0000133,5.60e-20,44;CL:0002319,2.05e-19,43;CL:0000540,1.35e-18,33;CL:0000047,1.35e-18,33;CL:0000031,1.35e-18,33;CL:0000404,1.35e-18,33;CL:0000117,3.36e-18,23;CL:0000337,3.36e-18,23;CL:0000393,4.90e-14,39;CL:0000211,4.90e-14,39;CL:0002321,6.36e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.58e-35!73;UBERON:0005743!1.58e-35!73;UBERON:0000073!2.55e-35!75;UBERON:0001016!2.55e-35!75;UBERON:0004121!5.10e-35!102;UBERON:0000924!5.10e-35!102;UBERON:0006601!5.10e-35!102;UBERON:0002346!1.35e-31!71;UBERON:0003075!1.35e-31!71;UBERON:0007284!1.35e-31!71;UBERON:0000033!1.60e-26!63;UBERON:0001049!1.24e-24!52;UBERON:0005068!1.24e-24!52;UBERON:0006241!1.24e-24!52;UBERON:0007135!1.24e-24!52;UBERON:0000955!3.98e-23!50;UBERON:0006238!3.98e-23!50;UBERON:0002616!2.81e-22!49;UBERON:0003056!2.67e-21!49;UBERON:0002020!7.41e-18!34;UBERON:0003080!2.02e-17!40;UBERON:0002780!1.23e-16!39;UBERON:0001890!1.23e-16!39;UBERON:0006240!1.23e-16!39;UBERON:0002791!4.84e-14!29;UBERON:0003528!4.84e-14!29;UBERON:0001893!4.84e-14!29;UBERON:0007811!2.16e-13!86;UBERON:0000153!1.42e-11!94;UBERON:0000956!2.09e-09!21;UBERON:0001869!2.09e-09!21;UBERON:0000203!2.09e-09!21;UBERON:0003076!7.44e-08!12;UBERON:0003057!7.44e-08!12;UBERON:0002619!7.44e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.06e-40,73;UBERON:0001016,3.10e-38,75;UBERON:0004121,5.78e-37,95;UBERON:0000924,5.78e-37,95;UBERON:0006601,5.78e-37,95;UBERON:0002346,8.00e-34,64;UBERON:0003075,8.00e-34,64;UBERON:0007284,8.00e-34,64;UBERON:0000073,6.63e-30,54;UBERON:0010371,8.50e-30,73;UBERON:0001049,9.83e-28,52;UBERON:0005068,9.83e-28,52;UBERON:0006241,9.83e-28,52;UBERON:0007135,9.83e-28,52;UBERON:0010314,8.82e-25,92;UBERON:0000955,7.47e-23,47;UBERON:0006238,7.47e-23,47;UBERON:0003056,8.18e-23,49;UBERON:0002616,7.97e-22,46;UBERON:0002020,8.05e-22,34;UBERON:0003080,2.18e-18,40;UBERON:0002780,1.99e-17,39;UBERON:0001890,1.99e-17,39;UBERON:0006240,1.99e-17,39;UBERON:0003528,6.70e-17,29;UBERON:0002791,6.70e-17,29;UBERON:0001893,6.70e-17,29;UBERON:0000956,6.20e-11,21;UBERON:0001869,6.20e-11,21;UBERON:0000203,6.20e-11,21;UBERON:0003076,4.47e-10,12;UBERON:0003057,4.47e-10,12;UBERON:0002619,6.32e-09,17;UBERON:0002420,2.12e-07,8;UBERON:0007245,2.12e-07,8;UBERON:0010009,2.12e-07,8;UBERON:0010011,2.12e-07,8;UBERON:0000454,2.12e-07,8;UBERON:0002240,2.94e-07,6;UBERON:0005174,2.94e-07,6;UBERON:0001137,2.94e-07,6;UBERON:0002021,7.03e-07,10;UBERON:0000411,7.03e-07,10;UBERON:0001950,7.03e-07,10
|phase1_expression=4.32401887182944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.15705656797875,1.31811709640683,0.58328969722285,3.07970127575798,5.75010257459886,0,0,0,0,0,0,9.5088736604011,8.46385566835253,5.70448263155561,0.677689064138264,0,0,0,0,5.99200221036809,8.4528027170742,1.55534418462716,1.89008313664367,1.89292465216244,23.9946826899195,26.283356373242,1.95985278743926,1.62937300731002,1.83843757322004,16.5173821499083,18.2592893461818,14.7462271925994,3.29715719325485,3.84248103130121,2.6045668527838,6.70039197603314,12.380777420697,9.62628960993904,17.9723437138937,14.6642831223076,9.13357284543973,0.151452386666368,0.453429360640713,0,0,0,0,0,0,0.421333260395256,0,0,0,2.39433813620357,0,0,0,0,0,0,0.5709193985953,0,0,2.94925055502431,4.56698217468212,2.7673859670727,2.11011696773672,3.52766121407114,0.251333182659351,0,0.144599356919912,0,0,0.220841518460394,0,0,7.31951992528868,6.28340120440365,0,0,0,0,21.7196427136993,11.4375150704657,5.40313714085317,8.51739168942155,7.67146371990992,18.7009240103604,17.8465389374533,0,0.124406970610093,0,1.47309299120532,0.130120442962704,1.83921683546778,3.24111833649629,4.37043971723574,5.10273743634959,4.74020765053944,4.77878795254617,8.2785078636485,0,0.189106080167819,0.351902248327898,0,0.834141747676794,0,0,0,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,7.78072809687271,6.99751364179134,0,0,0,0.464473343720877,0.128867461322093,0.403367049246685,0,0.570676878337677,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.610953983535943,0.193952487167626,0.420814919341911,0,0,0,0,0,0.333690211432188,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0.289298117163023,0,0,0,0,8.50918126935297,9.72856998715286,0,0,1.57754109708128,1.56175497718655,1.50796378412959,2.38968797952552,3.7875774594007,3.67999490025482,0.809621403349789,0.584511715822624,0,135.597595530003,0,0.35613120733451,0.651547837414304,0,0,0.242780636154981,0,0.565815239267694,0.295301892880773,0,0,0,0,0,0,0,1.70219802876894,0.18006109403131,0.258717367565509,0.428674070063185,0.532020700926821,1.60531935841864,2.63278432963394,2.43571959291679,0.23467170806371,0,1.32317038832977,0,0,0.0603129249281559,0,0,0,8.90041449650446,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0.149516546043979,0.330916980914195,0.777804753376191,0.774958940866387,0.168956125490778,1.17357238645754,1.5624526181274,10.8005124758482,2.41584120826006,1.72818003754719,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,1.35232715822533,0,0,0,0,7.34177395402186,5.52390283808612,7.44764167471216,2.749650917499,2.05524755931193,3.0215755895588,3.37511250115903,1.35096360967266,1.35942722695261,3.10656187051092,0.207574695168353,1.99512436700516,0.682934423016537,0.243106717068294,1.04806581313991,1.2869045591501,0.888986911206461,1.23621034343337,1.60459604795908,1.01078884705519,2.28131369901216,1.32038438970253,1.591905626988,1.6646539625266,1.37845125493472,0.476293691283074,1.15884325944855,1.35036454324594,1.23625770240992,1.17759136107518,1.02860775715625,1.4198064492747,0.953744759789284,0.726732083161643,1.31753132581463,1.60767754994185,0.73171189149109,1.31534855718921,0.814824683075171,2.24456908663095,2.01679530811096,1.18205378850676,0.818462086339379,1.70430525304563,0.771626443924566,4.24677982494508,1.87145286756327,1.50409737833809,1.53030665655075,0.882365676478062,1.85494268496337
|phase1_expression=4.32401887182944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.15705656797875,1.31811709640683,0.58328969722285,3.07970127575798,5.75010257459886,0,0,0,0,0,0,9.5088736604011,8.46385566835253,5.70448263155561,0.677689064138264,0,0,0,0,5.99200221036809,8.4528027170742,1.55534418462716,1.89008313664367,1.89292465216244,23.9946826899195,26.283356373242,1.95985278743926,1.62937300731002,1.83843757322004,16.5173821499083,18.2592893461818,14.7462271925994,3.29715719325485,3.84248103130121,2.6045668527838,6.70039197603314,12.380777420697,9.62628960993904,17.9723437138937,14.6642831223076,9.13357284543973,0.151452386666368,0.453429360640713,0,0,0,0,0,0,0.421333260395256,0,0,0,2.39433813620357,0,0,0,0,0,0,0.5709193985953,0,0,2.94925055502431,4.56698217468212,2.7673859670727,2.11011696773672,3.52766121407114,0.251333182659351,0,0.144599356919912,0,0,0.220841518460394,0,0,7.31951992528868,6.28340120440365,0,0,0,0,21.7196427136993,11.4375150704657,5.40313714085317,8.51739168942155,7.67146371990992,18.7009240103604,17.8465389374533,0,0.124406970610093,0,1.47309299120532,0.130120442962704,1.83921683546778,3.24111833649629,4.37043971723574,5.10273743634959,4.74020765053944,4.77878795254617,8.2785078636485,0,0.189106080167819,0.351902248327898,0,0.834141747676794,0,0,0,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,7.78072809687271,6.99751364179134,0,0,0,0.464473343720877,0.128867461322093,0.403367049246685,0,0.570676878337677,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.610953983535943,0.193952487167626,0.420814919341911,0,0,0,0,0,0.333690211432188,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0.289298117163023,0,0,0,0,8.50918126935297,9.72856998715286,0,0,1.57754109708128,1.56175497718655,1.50796378412959,2.38968797952552,3.7875774594007,3.67999490025482,0.809621403349789,0.584511715822624,0,135.597595530003,0,0.35613120733451,0.651547837414304,0,0,0.242780636154981,0,0.565815239267694,0.295301892880773,0,0,0,0,0,0,0,1.70219802876894,0.18006109403131,0.258717367565509,0.428674070063185,0.532020700926821,1.60531935841864,2.63278432963394,2.43571959291679,0.23467170806371,0,1.32317038832977,0,0,0.0603129249281559,0,0,0,8.90041449650446,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0.149516546043979,0.330916980914195,0.777804753376191,0.774958940866387,0.168956125490778,1.17357238645754,1.5624526181274,10.8005124758482,2.41584120826006,1.72818003754719,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,1.35232715822533,0,0,0,0,7.34177395402186,5.52390283808612,7.44764167471216,2.749650917499,2.05524755931193,3.0215755895588,3.37511250115903,1.35096360967266,1.35942722695261,3.10656187051092,0.207574695168353,1.99512436700516,0.682934423016537,0.243106717068294,1.04806581313991,1.2869045591501,0.888986911206461,1.23621034343337,1.60459604795908,1.01078884705519,2.28131369901216,1.32038438970253,1.591905626988,1.6646539625266,1.37845125493472,0.476293691283074,1.15884325944855,1.35036454324594,1.23625770240992,1.17759136107518,1.02860775715625,1.4198064492747,0.953744759789284,0.726732083161643,1.31753132581463,1.60767754994185,0.73171189149109,1.31534855718921,0.814824683075171,2.24456908663095,2.01679530811096,1.18205378850676,0.818462086339379,1.70430525304563,0.771626443924566,4.24677982494508,1.87145286756327,1.50409737833809,1.53030665655075,0.882365676478062,1.85494268496337
|short_description=p2@Cacng5
|short_description=p2@Cacng5
}}
}}

Latest revision as of 21:09, 26 September 2015

Short description:p2@Cacng5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cacng5_5end
Coexpression cluster:MCL_coexpression_mm9:93
Association with transcript: 0bp_to_ENSMUST00000039071, NM_001199301, uc007mbc.1_5end
EntrezGene:Cacng5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cacng5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.16
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.51
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.99
Mouse Microglia, donor2.CNhs12634.11736-123E88.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.75
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.97
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.66
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.13
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C13.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I26.28
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A421.72
corpus striatum, adult.CNhs10487.19-21D811.44
corpus striatum, neonate N00.CNhs11226.630-43F15.40
cortex, adult.CNhs10473.12-14D58.52
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F218.70
diencephalon, neonate N30.CNhs11201.1388-42B217.85
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C93.24
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C65.10
eyeball, neonate N01.CNhs11140.1532-43E74.74
eyeball, neonate N02.CNhs11205.1551-44G84.78
eyeball, neonate N16.CNhs11188.777-19A28.28
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E87.78
hippocampus, neonate N00.CNhs11228.627-43G17.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.51
medulla oblongata, neonate N30.CNhs11200.1396-42A39.73
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I9135.60
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C98.90
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D910.80
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell5.60e-2044
neurectodermal cell5.60e-2044
neural cell2.05e-1943
neuron1.35e-1833
neuronal stem cell1.35e-1833
neuroblast1.35e-1833
electrically signaling cell1.35e-1833
CNS neuron (sensu Vertebrata)3.36e-1823
neuroblast (sensu Vertebrata)3.36e-1823
electrically responsive cell4.90e-1439
electrically active cell4.90e-1439
embryonic cell6.36e-0870

Uber anatomy
Ontology termp-valuen
central nervous system6.06e-4073
nervous system3.10e-3875
ectoderm-derived structure5.78e-3795
ectoderm5.78e-3795
presumptive ectoderm5.78e-3795
neurectoderm8.00e-3464
neural plate8.00e-3464
presumptive neural plate8.00e-3464
regional part of nervous system6.63e-3054
ecto-epithelium8.50e-3073
neural tube9.83e-2852
neural rod9.83e-2852
future spinal cord9.83e-2852
neural keel9.83e-2852
structure with developmental contribution from neural crest8.82e-2592
brain7.47e-2347
future brain7.47e-2347
pre-chordal neural plate8.18e-2349
regional part of brain7.97e-2246
gray matter8.05e-2234
anterior neural tube2.18e-1840
regional part of forebrain1.99e-1739
forebrain1.99e-1739
future forebrain1.99e-1739
brain grey matter6.70e-1729
regional part of telencephalon6.70e-1729
telencephalon6.70e-1729
cerebral cortex6.20e-1121
cerebral hemisphere6.20e-1121
pallium6.20e-1121
posterior neural tube4.47e-1012
chordal neural plate4.47e-1012
regional part of cerebral cortex6.32e-0917
basal ganglion2.12e-078
nuclear complex of neuraxis2.12e-078
aggregate regional part of brain2.12e-078
collection of basal ganglia2.12e-078
cerebral subcortex2.12e-078
spinal cord2.94e-076
dorsal region element2.94e-076
dorsum2.94e-076
occipital lobe7.03e-0710
visual cortex7.03e-0710
neocortex7.03e-0710
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:107776355..107776383,-&oldid=4274414"