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FFCP PHASE1:Mm9::chr11:107776320..107776353,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=140723
|EntrezGene=140723
|HGNC=
|HGNC=
|MCL_coexpression_id=93
|TSSclassifier=NA
|UniProt=Q8VHW4,Q544Q4
|UniProt=Q8VHW4,Q544Q4
|association_with_transcript=15bp_to_ENSMUST00000039071,NM_001199301,uc007mbc.1_5end
|association_with_transcript=15bp_to_ENSMUST00000039071,NM_001199301,uc007mbc.1_5end
|cluster_id=chr11:107776320..107776353,-
|description=CAGE_peak_1_at_Cacng5_5end
|description=CAGE_peak_1_at_Cacng5_5end
|id=chr11:107776320..107776353,-
|id=chr11:107776320..107776353,-
|ontology_enrichment_celltype=CL:0000221!5.02e-19!44;CL:0000133!5.02e-19!44;CL:0002319!1.46e-18!43;CL:0000540!1.85e-15!33;CL:0000047!1.85e-15!33;CL:0000031!1.85e-15!33;CL:0000404!1.85e-15!33;CL:0000055!5.01e-13!50;CL:0000117!1.85e-12!23;CL:0000337!1.85e-12!23;CL:0000393!1.41e-10!39;CL:0000211!1.41e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000221,2.87e-25,44;CL:0000133,2.87e-25,44;CL:0002319,1.27e-24,43;CL:0000540,2.82e-20,33;CL:0000047,2.82e-20,33;CL:0000031,2.82e-20,33;CL:0000404,2.82e-20,33;CL:0000117,1.13e-15,23;CL:0000337,1.13e-15,23;CL:0000393,2.01e-15,39;CL:0000211,2.01e-15,39;CL:0002321,1.02e-10,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.28e-36!102;UBERON:0000924!1.28e-36!102;UBERON:0006601!1.28e-36!102;UBERON:0001017!2.39e-34!73;UBERON:0005743!2.39e-34!73;UBERON:0000073!3.71e-34!75;UBERON:0001016!3.71e-34!75;UBERON:0002346!4.70e-31!71;UBERON:0003075!4.70e-31!71;UBERON:0007284!4.70e-31!71;UBERON:0000033!7.11e-25!63;UBERON:0001049!3.67e-22!52;UBERON:0005068!3.67e-22!52;UBERON:0006241!3.67e-22!52;UBERON:0007135!3.67e-22!52;UBERON:0000955!4.97e-21!50;UBERON:0006238!4.97e-21!50;UBERON:0002616!3.13e-20!49;UBERON:0003056!8.53e-20!49;UBERON:0003080!1.72e-15!40;UBERON:0002020!2.41e-15!34;UBERON:0002780!8.70e-15!39;UBERON:0001890!8.70e-15!39;UBERON:0006240!8.70e-15!39;UBERON:0007811!9.01e-13!86;UBERON:0002791!4.37e-12!29;UBERON:0003528!4.37e-12!29;UBERON:0001893!4.37e-12!29;UBERON:0000153!3.21e-10!94;UBERON:0000956!1.75e-08!21;UBERON:0001869!1.75e-08!21;UBERON:0000203!1.75e-08!21;UBERON:0003076!1.91e-07!12;UBERON:0003057!1.91e-07!12;UBERON:0002619!7.07e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.37e-43,73;UBERON:0001016,9.52e-43,75;UBERON:0004121,6.95e-42,95;UBERON:0000924,6.95e-42,95;UBERON:0006601,6.95e-42,95;UBERON:0002346,9.60e-34,64;UBERON:0003075,9.60e-34,64;UBERON:0007284,9.60e-34,64;UBERON:0010371,7.02e-30,73;UBERON:0000073,1.62e-28,54;UBERON:0001049,2.29e-26,52;UBERON:0005068,2.29e-26,52;UBERON:0006241,2.29e-26,52;UBERON:0007135,2.29e-26,52;UBERON:0010314,3.70e-25,92;UBERON:0003056,4.01e-22,49;UBERON:0000955,6.45e-22,47;UBERON:0006238,6.45e-22,47;UBERON:0002616,6.91e-21,46;UBERON:0002020,9.49e-20,34;UBERON:0003080,4.28e-17,40;UBERON:0002780,3.54e-16,39;UBERON:0001890,3.54e-16,39;UBERON:0006240,3.54e-16,39;UBERON:0003528,2.83e-15,29;UBERON:0002791,2.83e-15,29;UBERON:0001893,2.83e-15,29;UBERON:0000956,2.54e-10,21;UBERON:0001869,2.54e-10,21;UBERON:0000203,2.54e-10,21;UBERON:0003076,3.62e-10,12;UBERON:0003057,3.62e-10,12;UBERON:0002619,3.99e-08,17;UBERON:0002240,8.54e-07,6;UBERON:0005174,8.54e-07,6;UBERON:0001137,8.54e-07,6
|phase1_expression=5.76535849577258,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.8402892306206,5.4921545683618,2.52758868796568,8.9591309840232,7.18762821824858,0,0,0,0,0,0,6.87875966922632,10.0508286061686,8.87363964908651,0.677689064138264,1.77858959222228,0,0,0,22.7696083993988,33.0427742576537,2.69592992002042,2.8351247049655,2.3135745748652,19.7099179238624,15.6816664075646,0.734944795289724,1.24599112323707,2.75765635983006,15.4162233399144,27.7081523644857,19.3544231902867,2.63772575460388,2.01272815925301,1.04182674111352,14.5175159480718,11.8180148106653,12.835052813252,17.6777151284201,15.8032565687004,6.15118171223492,0.075726193333184,1.058001841495,0,0,0,0,0,0,1.12355536105401,0,0,0,3.66192891419369,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,3.46970653532272,5.78484408793068,5.99600292865752,4.97384713823654,3.29248379979973,0.753999547978053,0,0.144599356919912,0,0,0,0,0,40.4037499875935,36.0248335719143,0.255457055208591,0,0,0,20.9706895166752,13.2675174817402,2.63874139437015,7.82209440865244,4.60287823194595,24.5189892580281,21.415846724944,0.101839363850316,0.124406970610093,0,4.20883711772948,0.390361328888111,3.44853156650209,5.04173963454978,4.9732589885786,6.12328492361951,6.66191345481219,7.12133106653939,12.9351685369508,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0.162137619091711,0,0,0.134206418760372,4.41608891984667,6.48299057989492,0,0,0,0.464473343720877,0,0.403367049246685,0.444756087689741,0.190225626112559,0,0.329397909448022,0.754005626400808,0,0,0,0,0,0.189667900953082,0.799739588268102,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0,0,0.333690211432188,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,0,0,9.9541365792431,7.73597131508541,0,0.252470927204373,2.2085575359138,1.95219372148319,5.60100834105277,5.4962823529087,13.3679204449436,20.3815102167959,0,1.46127928955656,1.97643888973262,114.390388646163,0.283880170416537,0,0.977321756121456,0,0,0.485561272309963,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,2.04263763452273,0.540183282093931,0.258717367565509,0.214337035031592,0.886701168211368,2.14042581122485,2.96188237083818,4.56697423671899,0.469343416127421,0,1.7642271844397,0.32977250588296,0,0.0603129249281559,0,0.328281799490123,0,9.45669040253599,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0,0,0.26175594198403,0.648074866458964,0,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0.516639293910924,0.168956125490778,0.352071715937262,3.3853140059427,11.4296685424025,5.31485065817213,1.72818003754719,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,2.51146472241848,0,0.183151624267265,0.214368379079066,0,4.51801474093653,1.84130094602871,4.58316410751517,1.54667864109319,3.42541259885321,3.7769694869485,2.02506750069542,1.35096360967266,1.35942722695261,2.5888015587591,0.207574695168353,1.19707462020309,0.512200817262403,1.21553358534147,1.46729213839588,0.919217542250071,0.44449345560323,1.23621034343337,1.92551525755089,1.01078884705519,0.760437899670719,2.07488975524684,0.749132059759059,0.960377286073039,1.26358031702349,0.476293691283074,0.695305955669133,1.15745532278223,0.824171801606613,1.47198920134397,0.685738504770831,0.70990322463735,0.953744759789284,1.0174249164263,2.1645157495526,0.846146078916765,1.82927972872773,1.8414879800649,1.08643291076689,0.561142271657738,0.949080144993393,1.37906275325789,1.22769312950907,0.77468420592983,0.964533054905707,4.49659040288303,1.16965804222704,1.28922632428979,2.10417165275728,1.76473135295612,0.231867835620421
|phase1_expression=5.76535849577258,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.8402892306206,5.4921545683618,2.52758868796568,8.9591309840232,7.18762821824858,0,0,0,0,0,0,6.87875966922632,10.0508286061686,8.87363964908651,0.677689064138264,1.77858959222228,0,0,0,22.7696083993988,33.0427742576537,2.69592992002042,2.8351247049655,2.3135745748652,19.7099179238624,15.6816664075646,0.734944795289724,1.24599112323707,2.75765635983006,15.4162233399144,27.7081523644857,19.3544231902867,2.63772575460388,2.01272815925301,1.04182674111352,14.5175159480718,11.8180148106653,12.835052813252,17.6777151284201,15.8032565687004,6.15118171223492,0.075726193333184,1.058001841495,0,0,0,0,0,0,1.12355536105401,0,0,0,3.66192891419369,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,3.46970653532272,5.78484408793068,5.99600292865752,4.97384713823654,3.29248379979973,0.753999547978053,0,0.144599356919912,0,0,0,0,0,40.4037499875935,36.0248335719143,0.255457055208591,0,0,0,20.9706895166752,13.2675174817402,2.63874139437015,7.82209440865244,4.60287823194595,24.5189892580281,21.415846724944,0.101839363850316,0.124406970610093,0,4.20883711772948,0.390361328888111,3.44853156650209,5.04173963454978,4.9732589885786,6.12328492361951,6.66191345481219,7.12133106653939,12.9351685369508,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0.162137619091711,0,0,0.134206418760372,4.41608891984667,6.48299057989492,0,0,0,0.464473343720877,0,0.403367049246685,0.444756087689741,0.190225626112559,0,0.329397909448022,0.754005626400808,0,0,0,0,0,0.189667900953082,0.799739588268102,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0,0,0.333690211432188,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,0,0,9.9541365792431,7.73597131508541,0,0.252470927204373,2.2085575359138,1.95219372148319,5.60100834105277,5.4962823529087,13.3679204449436,20.3815102167959,0,1.46127928955656,1.97643888973262,114.390388646163,0.283880170416537,0,0.977321756121456,0,0,0.485561272309963,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,2.04263763452273,0.540183282093931,0.258717367565509,0.214337035031592,0.886701168211368,2.14042581122485,2.96188237083818,4.56697423671899,0.469343416127421,0,1.7642271844397,0.32977250588296,0,0.0603129249281559,0,0.328281799490123,0,9.45669040253599,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0,0,0.26175594198403,0.648074866458964,0,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0.516639293910924,0.168956125490778,0.352071715937262,3.3853140059427,11.4296685424025,5.31485065817213,1.72818003754719,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,2.51146472241848,0,0.183151624267265,0.214368379079066,0,4.51801474093653,1.84130094602871,4.58316410751517,1.54667864109319,3.42541259885321,3.7769694869485,2.02506750069542,1.35096360967266,1.35942722695261,2.5888015587591,0.207574695168353,1.19707462020309,0.512200817262403,1.21553358534147,1.46729213839588,0.919217542250071,0.44449345560323,1.23621034343337,1.92551525755089,1.01078884705519,0.760437899670719,2.07488975524684,0.749132059759059,0.960377286073039,1.26358031702349,0.476293691283074,0.695305955669133,1.15745532278223,0.824171801606613,1.47198920134397,0.685738504770831,0.70990322463735,0.953744759789284,1.0174249164263,2.1645157495526,0.846146078916765,1.82927972872773,1.8414879800649,1.08643291076689,0.561142271657738,0.949080144993393,1.37906275325789,1.22769312950907,0.77468420592983,0.964533054905707,4.49659040288303,1.16965804222704,1.28922632428979,2.10417165275728,1.76473135295612,0.231867835620421
|short_description=p1@Cacng5
|short_description=p1@Cacng5
}}
}}

Latest revision as of 21:09, 26 September 2015

Short description:p1@Cacng5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cacng5_5end
Coexpression cluster:MCL_coexpression_mm9:93
Association with transcript: 15bp_to_ENSMUST00000039071, NM_001199301, uc007mbc.1_5end
EntrezGene:Cacng5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cacng5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C219.84
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.49
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.88
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C822.77
Mouse Microglia, donor2.CNhs12634.11736-123E833.04
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.68
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F327.71
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.35
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E414.52
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.68
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C53.47
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I16.00
adrenal gland, embryo E18.CNhs11026.1262-18F54.97
adrenal gland, neonate N00.CNhs11191.1311-23C13.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B240.40
cerebellum, neonate N30.CNhs11135.1395-42I236.02
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A420.97
corpus striatum, adult.CNhs10487.19-21D813.27
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D57.82
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F224.52
diencephalon, neonate N30.CNhs11201.1388-42B221.42
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C95.04
eyeball, embryo E17.CNhs11023.1261-18D44.97
eyeball, neonate N00.CNhs11207.633-15C66.12
eyeball, neonate N01.CNhs11140.1532-43E76.66
eyeball, neonate N02.CNhs11205.1551-44G87.12
eyeball, neonate N16.CNhs11188.777-19A212.94
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G16.48
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C29.95
medulla oblongata, neonate N30.CNhs11200.1396-42A37.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D813.37
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D920.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I9114.39
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C99.46
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I43.39
testis, neonate N10.CNhs11204.763-44D911.43
testis, neonate N20.CNhs11110.839-18H35.31
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell2.87e-2544
neurectodermal cell2.87e-2544
neural cell1.27e-2443
neuron2.82e-2033
neuronal stem cell2.82e-2033
neuroblast2.82e-2033
electrically signaling cell2.82e-2033
CNS neuron (sensu Vertebrata)1.13e-1523
neuroblast (sensu Vertebrata)1.13e-1523
electrically responsive cell2.01e-1539
electrically active cell2.01e-1539
embryonic cell1.02e-1070

Uber anatomy
Ontology termp-valuen
central nervous system2.37e-4373
nervous system9.52e-4375
ectoderm-derived structure6.95e-4295
ectoderm6.95e-4295
presumptive ectoderm6.95e-4295
neurectoderm9.60e-3464
neural plate9.60e-3464
presumptive neural plate9.60e-3464
ecto-epithelium7.02e-3073
regional part of nervous system1.62e-2854
neural tube2.29e-2652
neural rod2.29e-2652
future spinal cord2.29e-2652
neural keel2.29e-2652
structure with developmental contribution from neural crest3.70e-2592
pre-chordal neural plate4.01e-2249
brain6.45e-2247
future brain6.45e-2247
regional part of brain6.91e-2146
gray matter9.49e-2034
anterior neural tube4.28e-1740
regional part of forebrain3.54e-1639
forebrain3.54e-1639
future forebrain3.54e-1639
brain grey matter2.83e-1529
regional part of telencephalon2.83e-1529
telencephalon2.83e-1529
cerebral cortex2.54e-1021
cerebral hemisphere2.54e-1021
pallium2.54e-1021
posterior neural tube3.62e-1012
chordal neural plate3.62e-1012
regional part of cerebral cortex3.99e-0817
spinal cord8.54e-076
dorsal region element8.54e-076
dorsum8.54e-076
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