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FFCP PHASE1:Mm9::chr10:61111390..61111410,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=67895
|EntrezGene=67895
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=E9Q5Z3,Q4FK49,Q9D819
|UniProt=E9Q5Z3,Q4FK49,Q9D819
|association_with_transcript=21bp_to_ENSMUST00000160470,ENSMUST00000170726,NM_026438,uc007fge.1_5end
|association_with_transcript=21bp_to_ENSMUST00000160470,ENSMUST00000170726,NM_026438,uc007fge.1_5end
|cluster_id=chr10:61111390..61111410,+
|description=CAGE_peak_2_at_Ppa1_5end
|description=CAGE_peak_2_at_Ppa1_5end
|id=chr10:61111390..61111410,+
|id=chr10:61111390..61111410,+
|ontology_enrichment_celltype=CL:0000117!1.56e-11!23;CL:0000337!1.56e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.56e-11,23;CL:0000337,1.56e-11,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!3.23e-14!34;UBERON:0002791!1.06e-12!29;UBERON:0003528!1.06e-12!29;UBERON:0001893!1.06e-12!29;UBERON:0001049!3.84e-11!52;UBERON:0005068!3.84e-11!52;UBERON:0006241!3.84e-11!52;UBERON:0007135!3.84e-11!52;UBERON:0000955!5.10e-11!50;UBERON:0006238!5.10e-11!50;UBERON:0002616!5.73e-11!49;UBERON:0000956!1.24e-09!21;UBERON:0001869!1.24e-09!21;UBERON:0000203!1.24e-09!21;UBERON:0003080!2.81e-09!40;UBERON:0000033!3.78e-09!63;UBERON:0002780!5.25e-09!39;UBERON:0001890!5.25e-09!39;UBERON:0006240!5.25e-09!39;UBERON:0001017!5.37e-09!73;UBERON:0005743!5.37e-09!73;UBERON:0000073!5.39e-09!75;UBERON:0001016!5.39e-09!75;UBERON:0002619!6.79e-08!17;UBERON:0003056!1.98e-07!49;UBERON:0000344!3.25e-07!15;UBERON:0000064!7.03e-07!99;UBERON:0002021!7.40e-07!10;UBERON:0000411!7.40e-07!10;UBERON:0001950!7.40e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.23e-14,34;UBERON:0003528,1.06e-12,29;UBERON:0002791,1.06e-12,29;UBERON:0001893,1.06e-12,29;UBERON:0000073,1.54e-12,54;UBERON:0001049,3.84e-11,52;UBERON:0005068,3.84e-11,52;UBERON:0006241,3.84e-11,52;UBERON:0007135,3.84e-11,52;UBERON:0000956,1.24e-09,21;UBERON:0001869,1.24e-09,21;UBERON:0000203,1.24e-09,21;UBERON:0000955,1.86e-09,47;UBERON:0006238,1.86e-09,47;UBERON:0002616,2.11e-09,46;UBERON:0003080,2.81e-09,40;UBERON:0002780,5.25e-09,39;UBERON:0001890,5.25e-09,39;UBERON:0006240,5.25e-09,39;UBERON:0001017,5.37e-09,73;UBERON:0001016,5.39e-09,75;UBERON:0011216,7.75e-09,194;UBERON:0002346,1.73e-08,64;UBERON:0003075,1.73e-08,64;UBERON:0007284,1.73e-08,64;UBERON:0002619,6.79e-08,17;UBERON:0003056,1.98e-07,49;UBERON:0000344,3.25e-07,15;UBERON:0010371,6.81e-07,73;UBERON:0002021,7.40e-07,10;UBERON:0000411,7.40e-07,10;UBERON:0001950,7.40e-07,10
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|phase1_expression=14.0930985452219,26.8711063882308,24.1149596876454,16.6355316218757,18.0322462780685,18.1309613664841,20.0906870912152,12.3958390503913,20.1327872676883,21.2998718953014,31.8465420899439,34.5413448449807,11.641649635322,9.70366466850871,11.3257319017325,7.08663435864391,8.39474253753776,5.20512572841092,4.66189074259512,6.79023442876848,9.52484849691981,13.6028603145213,24.291580389921,27.3587042976725,28.9055694144634,31.5827580263261,27.5687677541808,24.3482492935055,24.7030445293286,30.7476758307116,30.598810470432,11.4305521222734,9.84103660135312,0,30.3294200738838,37.5690298510193,29.8087260143059,1.25559489221072,1.5626706890476,1.57057123192139,0.588231488031014,0,0,10.0717454380462,7.90740063512214,9.36088436024576,3.9119567217402,17.0059621976748,11.2039953194581,20.2207095037255,17.0783434382942,14.3752564364972,6.71130424230945,13.7818806982155,12.0993767691287,13.1202312378333,9.45560351797897,7.73508138416164,22.8617600771345,24.3335850465135,34.2268957893337,8.80995783379743,14.2287167377782,1.7997994345628,3.9554654502679,4.2628806896766,3.89480143673926,3.84218305321555,24.6781277294177,30.5113420629621,27.9732198597338,21.9951257990929,25.6207507503872,24.7431414414207,26.0699681169603,34.9303138911808,31.9336054898227,31.1557104927858,35.943928781961,25.9815986828482,27.2633177935181,16.6692278578163,37.9688878641878,34.3285192119325,31.4764390420229,19.7401152267357,18.6506901846825,22.1815340532108,18.4771911732969,10.2777321745228,2.6087803983151,21.5105969245347,29.2387673494333,32.382191498269,27.2906095328021,15.6809410484067,13.3422199125164,18.5769051610083,27.0177444786984,23.6737514921928,16.0561498545416,6.41632387071589,2.54805239706646,0,49.1434663095456,45.3514159200426,44.4861511613009,15.7573754012303,3.6251303710604,4.89859058913922,13.3583701609925,8.22056791442781,9.91646638201052,11.0027527603414,5.17390311397101,11.3099932196708,4.44950941921873,19.665512541108,5.30766331169925,9.05894359705491,5.74187947997023,4.84875253135222,26.0948465705371,15.2246014446005,12.7762491156208,19.9256503062701,13.7787393181808,19.196887391789,14.2318654321832,20.2217363196511,16.0125210986519,17.591609295801,22.4233373048037,23.2701066170601,21.1943805450751,21.2536054618763,6.00852246716866,9.45492976636707,16.1742565397552,9.25944165900485,17.3060189140396,23.2201125477808,11.1638520479317,10.8507468841715,6.80364991513279,10.3772113430728,10.026084527891,10.3481348295606,25.2214551731425,14.9393803332577,11.6127741948206,14.2477226077924,12.2340789659263,10.447564995665,8.43706759272568,11.5439874754726,17.5553296828309,19.0437451264889,13.0715209721973,12.4275463521301,11.0227248191115,12.7844063637321,11.6004920436753,9.24791889212798,9.56456099901745,9.30135779001631,9.65784245038629,5.95503246072564,8.3925523455875,8.04420573987567,6.72871119230603,7.30999937126662,14.7098577245004,9.39444931322602,13.8791366052324,16.6705472054441,21.4772208939469,23.2716498663919,13.650448034255,13.7019636397659,12.6290112095651,13.3111126251406,10.0070119730192,15.0278244628922,17.0830462156024,10.7054320570607,11.5614196048124,11.1415624343044,9.94316844307513,19.7740269903929,21.6138049874694,23.4986702440153,16.6907752838712,12.9100819248994,6.76246414038483,12.6263823264095,7.17624202520215,6.94344616914154,5.88099795255593,9.88987991463334,9.57692239832386,10.8589504251184,20.1587786419261,13.1807633515714,14.7419246334902,11.9176919563972,7.50582449137461,10.3706178693539,9.93040821947537,11.2201493605816,11.8358715545776,15.3754391385326,27.3159592401974,13.7692150637346,12.1694692514679,23.2372567711343,22.0658818631952,23.639732546805,2.95605104266567,14.7803301180978,13.5260930446881,14.0888421193406,10.7957514212711,5.52770649557992,7.85544014923845,4.09780660501378,4.25614889086716,5.75808193086815,3.98636921643718,4.42430949732493,6.38934432903814,3.18227928879325,1.50791283939272,11.4220193601929,23.6046851049137,9.3818493743609,25.0458920380955,23.9111840648094,19.5082584998244,11.3611917241968,11.6738041184015,10.1514073517126,7.10897212518236,7.88597033243422,7.5751549188014,6.22768367735431,10.1202675418724,9.9366991689846,5.92931666919785,14.4594592389813,6.81312408999689,9.25941139069727,7.98146100832523,4.45419332025846,17.2568679841952,11.4106898992841,16.9301191900261,14.8998013007159,14.4697927511579,15.3717573971964,11.1124166062335,10.1789444253702,12.1209108650805,19.2782422340848,15.8127912862498,17.5330423521918,12.5962654128902,12.6042765821917,11.3835641728824,8.3591443662321,7.62563004661776,9.81028496811388,8.88564711251453,6.39376393140658,5.63212099352905,2.96564899209348,28.4481633490901,7.09010887648364,8.55761461488299,9.46912921372047,8.23669173621642,7.55048138827282,15.1570035047522,18.542530201051,7.00570611271196,11.5576646059405,8.14855920426731,4.70921142511728,4.51090951479383,4.57556346413045,17.5077782893671,15.1147568509551,11.4705978257672,13.3653886522116,14.5514557047322,10.3692928234693,13.1766515802598,13.7998275369549,10.6997656235627,13.3515702920973,11.9020976244484,16.4906243449939,20.6087807533951,14.2908042009993,7.89170114157866,8.52244312450679,14.3948886697675,7.38914515707381,12.2701832303845,10.3063236549375,7.04143431874524,10.416350787516,12.3734026422339,10.1465330746923,6.04863013141517,4.74016680942267,15.0016659314722,12.2226039026144,16.2401028722244,13.0689487837261,9.93406773906325,10.8175904567972,8.27061352177632,11.9140410938814,7.39206024553498,6.55370203389463,8.28391986287895,7.60073548958603,5.02570679380746,9.9761368790693,23.3085251042768,33.6426962285534,15.2775000891311,8.50034213741638,7.88266396894964,6.41030684935428,15.2201549146137,37.1163356986169,24.8490810751509,31.7624413189952,28.0718801585304,33.3395173746754,26.0331357512844,41.5466643564335,39.1513050134447,27.4695933966774,31.7199686288943,27.9590568345983,21.6915556450929,15.1629451892392,15.1952909121179,13.8570828728928,15.5113740344707,13.420576116851,8.44537565646138,10.9198580336614,11.5530915453053,12.8875577999537,10.8996098952803,9.05406438653166,10.3942073291569,9.28364709870604,11.3147873842558,9.0495801343784,11.5884325944855,8.87382414133043,9.06588981767275,10.1567254892734,11.6575545811041,8.69631450180754,12.1602456873134,9.30217066446903,10.540250606517,9.98452373121783,10.9756783723664,8.94437018888666,8.82726739998101,12.906272248128,10.0839765405548,10.3429706494342,10.2307760792422,9.29621047115796,11.7673032698496,13.989392364525,10.292990771598,9.45432637812513,6.69509162240952,9.70602244125868,7.65163857547391
|short_description=p2@Ppa1
|short_description=p2@Ppa1
}}
}}

Latest revision as of 04:05, 26 September 2015

Short description:p2@Ppa1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ppa1_5end
Coexpression cluster:NA
Association with transcript: 21bp_to_ENSMUST00000160470, ENSMUST00000170726, NM_026438, uc007fge.1_5end
EntrezGene:Ppa1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ppa1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G714.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I526.87
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I624.11
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.64
CD326+ enterocyte, pool2.CNhs13197.11849-124I418.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I718.13
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I820.09
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E912.40
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E720.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F221.30
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E631.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F134.54
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.64
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.09
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.66
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.79
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H213.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I924.29
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D127.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D228.91
GP2+ M cell, pool1.CNhs13228.11845-124H931.58
GP2+ M cell, pool2.CNhs13231.11846-124I127.57
GP2+ M cell, pool3.CNhs13240.11847-124I224.35
Ileum epithelium, pool1.CNhs13199.10252-104B924.70
Ileum epithelium, pool2.CNhs13232.10253-104C130.75
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C830.60
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I311.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F530.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F637.57
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F729.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.36
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C217.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C320.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C417.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.71
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.78
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A112.10
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.46
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.74
Mouse Granule cells, donor1.CNhs12131.11713-123C322.86
Mouse Granule cells, donor2.CNhs12357.11731-123E324.33
Mouse Granule cells, donor3.CNhs12108.11636-122C734.23
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.81
Mouse Meningeal cells, donor3.CNhs12109.11639-122D114.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D524.68
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F530.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.97
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F122.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D525.62
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D224.74
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F226.07
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D634.93
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D331.93
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F331.16
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D735.94
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D425.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F427.26
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E437.97
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E534.33
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.48
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.74
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.65
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E122.18
Mouse Schwann, donor1.CNhs12507.11728-123D918.48
Mouse Schwann, donor2.CNhs12573.11746-123F910.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F721.51
Mouse hepatocyte, donor1.CNhs13078.11714-123C429.24
Mouse hepatocyte, donor3.CNhs12615.11637-122C832.38
Mouse hepatocyte, donor6.CNhs13090.11822-124F427.29
Mouse hepatocyte, donor8.CNhs13091.11824-124F615.68
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I718.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E327.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I823.67
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G149.14
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G245.35
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G344.49
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.76
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C513.36
adrenal gland, embryo E16.CNhs11004.1254-43D68.22
adrenal gland, embryo E17.CNhs11043.1263-45I19.92
adrenal gland, embryo E18.CNhs11026.1262-18F511.00
adrenal gland, neonate N00.CNhs11191.1311-23C15.17
adrenal gland, neonate N25.CNhs11223.1377-27I311.31
amnion, adult pregnant day17.5.CNhs10488.583-22A84.45
aorta, adult.CNhs10498.46-23H119.67
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F59.06
bone (os femoris), neonate N16.CNhs11225.1525-43A65.74
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H426.09
cerebellum, adult.CNhs10494.15-8B215.22
cerebellum, neonate N30.CNhs11135.1395-42I212.78
colon, adult.CNhs10468.36-18H719.93
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C713.78
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D119.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D414.23
corpora quadrigemina, adult.CNhs10501.16-22A420.22
corpus striatum, adult.CNhs10487.19-21D816.01
corpus striatum, neonate N00.CNhs11226.630-43F117.59
cortex, adult.CNhs10473.12-14D522.42
cortex, neonate N30.CNhs11107.1392-42F223.27
diencephalon, adult.CNhs10482.20-12F221.19
diencephalon, neonate N30.CNhs11201.1388-42B221.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.01
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.45
epididymis, adult.CNhs10490.58-23B216.17
eyeball, adult.CNhs10484.31-12G49.26
eyeball, embryo E12.CNhs11016.345-16C617.31
eyeball, embryo E14.CNhs10521.399-16E223.22
eyeball, embryo E15.CNhs10593.426-16C911.16
eyeball, embryo E17.CNhs11023.1261-18D410.85
eyeball, neonate N00.CNhs11207.633-15C66.80
eyeball, neonate N01.CNhs11140.1532-43E710.38
eyeball, neonate N02.CNhs11205.1551-44G810.03
eyeball, neonate N16.CNhs11188.777-19A210.35
forelimb, embryo E11.CNhs10596.335-25E225.22
forelimb, embryo E12.CNhs10600.359-14H214.94
forelimb, embryo E13.CNhs10589.384-1E211.61
forelimb, embryo E14.CNhs10577.413-26A814.25
forelimb, embryo E15.CNhs11007.437-20E712.23
forelimb, embryo E17.CNhs10598.1517-43C410.45
forelimb, embryo E18.CNhs11008.1520-43B58.44
gonad, embryo E13.CNhs11044.1564-45I611.54
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C817.56
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D219.04
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D513.07
heart, embryo E11.CNhs10586.331-24E912.43
heart, embryo E12.CNhs11015.353-12F511.02
heart, embryo E13.CNhs11013.376-3I912.78
heart, embryo E14.CNhs10597.403-26D411.60
heart, embryo E15.CNhs11017.431-16C89.25
heart, embryo E16.CNhs11021.457-17C69.56
heart, embryo E17.CNhs11025.479-18E59.30
heart, embryo E18.CNhs11030.1283-20G39.66
heart, neonate N00.CNhs11213.639-21E35.96
heart, neonate N03.CNhs11221.1349-25I28.39
heart, neonate N10.CNhs11118.749-24G18.04
heart, neonate N16.CNhs11209.782-15G16.73
heart, neonate N20.CNhs11127.821-26I67.31
heart, neonate N25.CNhs11196.1351-25D314.71
heart, neonate N30.CNhs11202.1390-42D29.39
hippocampus, adult.CNhs10478.13-16E813.88
hippocampus, neonate N00.CNhs11228.627-43G116.67
intestinal mucosa, adult.CNhs10506.860-29I321.48
intestine, adult.CNhs10496.178-9A323.27
intestine, embryo E12.CNhs11019.1251-16I513.65
intestine, embryo E13.CNhs11010.381-16D513.70
intestine, embryo E15.CNhs10602.976-16D812.63
intestine, embryo E16.CNhs10585.463-22H413.31
intestine, embryo E17.CNhs10582.482-18D310.01
intestine, embryo E18.CNhs10526.1289-20F715.03
intestine, neonate N00.CNhs11126.644-26D117.08
intestine, neonate N01.CNhs11192.1322-23E910.71
intestine, neonate N06.CNhs11102.688-20B811.56
intestine, neonate N07.CNhs11095.720-20F211.14
intestine, neonate N10.CNhs11098.755-23A59.94
intestine, neonate N20.CNhs11187.827-18D119.77
intestine, neonate N25.CNhs11121.1352-25E321.61
intestine, neonate N30.CNhs11131.1384-42G123.50
kidney, embryo E14.CNhs10606.411-4I916.69
kidney, embryo E15.CNhs10997.434-16F812.91
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I212.63
kidney, embryo E18.CNhs11001.1288-20C77.18
kidney, neonate N00.CNhs11214.646-21G76.94
kidney, neonate N10.CNhs11206.758-6D55.88
kidney, neonate N20.CNhs11113.832-19I19.89
kidney, neonate N25.CNhs11122.1353-25F39.58
kidney, neonate N30.CNhs11203.1385-42H110.86
liver, adult pregnant day01.CNhs10466.508-5B220.16
liver, embryo E12.CNhs10601.355-15F813.18
liver, embryo E13.CNhs10524.378-3H614.74
liver, embryo E14.CNhs10594.409-16E111.92
liver, embryo E15.CNhs10520.433-16D77.51
liver, embryo E16.CNhs10523.462-17F510.37
liver, embryo E17.CNhs10510.481-18A39.93
liver, embryo E18.CNhs10579.499-43G411.22
liver, neonate N00.CNhs11117.641-24F411.84
liver, neonate N03.CNhs11123.1345-25G215.38
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H213.77
liver, neonate N10.CNhs11115.751-24B912.17
liver, neonate N20.CNhs11220.823-25A323.24
liver, neonate N25.CNhs11198.1368-26H122.07
liver, neonate N30.CNhs11106.1382-42D123.64
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G214.78
lung, embryo E14.CNhs10604.404-26F813.53
lung, embryo E15.CNhs11020.432-17C514.09
lung, embryo E16.CNhs10998.458-17B610.80
lung, embryo E17.CNhs10605.480-44A65.53
lung, embryo E18.CNhs10583.1287-20I67.86
lung, neonate N00.CNhs11224.640-42C64.10
lung, neonate N06.CNhs11212.683-20E54.26
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E63.99
lung, neonate N20.CNhs11109.822-18A44.42
lung, neonate N25.CNhs11119.1359-25C76.39
lung, neonate N30.CNhs11133.1394-42H23.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.42
mammary gland, adult lactating day02.CNhs10480.595-22B623.60
mammary gland, adult pregnant day19.CNhs10476.588-5H29.38
medulla oblongata, adult.CNhs10477.17-12C225.05
medulla oblongata, neonate N30.CNhs11200.1396-42A323.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C719.51
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.36
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.67
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.15
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.11
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.89
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.58
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.23
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.12
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.94
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I914.46
ovary, adult.CNhs10507.91-2I76.81
ovary, embryo E18.CNhs11040.505-44H79.26
ovary, neonate N00.CNhs11217.1299-22I47.98
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E417.26
pancreas, embryo E14.CNhs11012.405-44F411.41
pancreas, embryo E15.CNhs11042.1556-45F216.93
pancreas, embryo E16.CNhs11003.460-26E514.90
pancreas, embryo E17.CNhs10599.1558-45G314.47
pancreas, embryo E18.CNhs10580.1535-43I715.37
pancreas, neonate N00.CNhs11105.645-26G911.11
pancreas, neonate N01.CNhs11138.1531-43D710.18
pancreas, neonate N02.CNhs11139.1539-43D812.12
pancreas, neonate N16.CNhs11136.787-43B619.28
pancreas, neonate N25.CNhs11094.1555-45E215.81
pancreas, neonate N30.CNhs11182.1548-44H517.53
pituitary gland, adult.CNhs10493.21-1G812.60
pituitary gland, embryo E12.CNhs11018.346-16E612.60
pituitary gland, embryo E13.CNhs11009.370-44C711.38
pituitary gland, embryo E14.CNhs11037.398-44A58.36
pituitary gland, embryo E15.CNhs10592.427-16B97.63
pituitary gland, embryo E16.CNhs11036.449-43F69.81
pituitary gland, embryo E17.CNhs11039.1265-44F58.89
pituitary gland, neonate N00.CNhs11190.1308-22E96.39
placenta, adult pregnant day10.CNhs10472.539-13I75.63
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F828.45
skin, adult.CNhs10492.30-1C37.09
skin, neonate N00.CNhs11124.650-25G48.56
skin, neonate N03.CNhs11215.662-22H39.47
skin, neonate N06.CNhs11097.693-20I58.24
skin, neonate N10.CNhs11108.762-6C47.55
small intestine, neonate N16.CNhs11114.790-21I115.16
spinal cord, adult.CNhs10505.24-13C918.54
spleen, adult.CNhs10465.25-2G27.01
spleen, embryo E16.CNhs11035.461-43C111.56
spleen, embryo E18.CNhs11011.1271-21F28.15
spleen, neonate N10.CNhs11116.752-24D14.71
spleen, neonate N20.CNhs11112.824-19H14.51
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C617.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C915.11
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.47
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E314.55
stomach, embryo E15.CNhs10603.1252-16G810.37
stomach, embryo E16.CNhs11022.459-17D413.18
stomach, embryo E17.CNhs11006.1035-18D513.80
stomach, embryo E18.CNhs10999.1286-20C610.70
stomach, neonate N03.CNhs11193.1340-24B813.35
stomach, neonate N07.CNhs11210.718-18A911.90
stomach, neonate N25.CNhs11104.1355-25E416.49
stomach, neonate N30.CNhs11134.1386-42I120.61
submandibular gland, adult.CNhs10469.59-29C114.29
testis, adult.CNhs10504.57-7G57.89
testis, embryo E13.CNhs11031.389-23F58.52
testis, embryo E15.CNhs11034.443-27C514.39
testis, embryo E16.CNhs11033.470-26G57.39
testis, embryo E17.CNhs11029.486-18I512.27
testis, embryo E18.CNhs11027.503-18G510.31
testis, neonate N00.CNhs11189.1300-22B77.04
testis, neonate N07.CNhs11222.726-26I410.42
testis, neonate N10.CNhs11204.763-44D912.37
testis, neonate N20.CNhs11110.839-18H310.15
testis, neonate N30.CNhs11130.1391-42E26.05
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I415.00
thymus, embryo E15.CNhs11005.430-45I212.22
thymus, embryo E16.CNhs11002.456-26C516.24
thymus, embryo E17.CNhs10581.478-18C113.07
thymus, embryo E18.CNhs10595.1273-19G49.93
thymus, neonate N02.CNhs11181.1541-43F810.82
thymus, neonate N03.CNhs11137.2104-43C78.27
thymus, neonate N06.CNhs11197.681-26C411.91
thymus, neonate N07.CNhs11211.713-19D37.39
thymus, neonate N10.CNhs11194.748-24E46.55
thymus, neonate N20.CNhs11186.820-7A28.28
thymus, neonate N25.CNhs11125.1362-25G77.60
thymus, neonate N30.CNhs11132.1393-42G25.03
tongue, adult.CNhs10499.32-1B49.98
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H323.31
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F733.64
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G515.28
urinary bladder, adult.CNhs10481.879-12E48.50
uterus, adult pregnant day19.CNhs10497.590-15F57.88
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D515.22
vesicular gland, adult.CNhs10491.51-27F837.12
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A124.85
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A231.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.07
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D733.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.03
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A541.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A639.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.47
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A831.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A927.96
whole body, embryo E11.CNhs11014.324-5I821.69
whole body, embryo E12.CNhs10587.857-27C915.16
whole body, embryo E13.CNhs10512.372-23H215.20
whole body, embryo E14.5.CNhs10578.420-27D213.86
whole body, embryo E14.CNhs10519.395-14B115.51
whole body, embryo E16.CNhs10514.453-14F213.42
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.92
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.55
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.90
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.39
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.31
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.16
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.70
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.16
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.98
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.83
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.34
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.30
whole body, embryo E17.5.CNhs10513.490-9F911.77
whole body, embryo E17.CNhs10517.475-3I513.99
whole body, embryo E18.CNhs10516.493-3B310.29
whole body, neonate N00.CNhs10525.657-19C29.45
whole body, neonate N01.CNhs10576.659-23C66.70
whole body, neonate N06.CNhs10515.692-21D19.71
whole body, neonate N10.CNhs10518.761-6B47.65





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.56e-1123
neuroblast (sensu Vertebrata)1.56e-1123

Uber anatomy
Ontology termp-valuen
gray matter3.23e-1434
brain grey matter1.06e-1229
regional part of telencephalon1.06e-1229
telencephalon1.06e-1229
regional part of nervous system1.54e-1254
neural tube3.84e-1152
neural rod3.84e-1152
future spinal cord3.84e-1152
neural keel3.84e-1152
cerebral cortex1.24e-0921
cerebral hemisphere1.24e-0921
pallium1.24e-0921
brain1.86e-0947
future brain1.86e-0947
regional part of brain2.11e-0946
anterior neural tube2.81e-0940
regional part of forebrain5.25e-0939
forebrain5.25e-0939
future forebrain5.25e-0939
central nervous system5.37e-0973
nervous system5.39e-0975
organ system subdivision7.75e-09194
neurectoderm1.73e-0864
neural plate1.73e-0864
presumptive neural plate1.73e-0864
regional part of cerebral cortex6.79e-0817
pre-chordal neural plate1.98e-0749
mucosa3.25e-0715
ecto-epithelium6.81e-0773
occipital lobe7.40e-0710
visual cortex7.40e-0710
neocortex7.40e-0710
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