FFCP PHASE1:Mm9::chr10:40603625..40603668,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=83767 | |EntrezGene=83767 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R5H6 | |UniProt=Q8R5H6 | ||
|association_with_transcript=0bp_to_ENSMUST00000105509_5end | |association_with_transcript=0bp_to_ENSMUST00000105509_5end | ||
|cluster_id=chr10:40603625..40603668,+ | |||
|description=CAGE_peak_1_at_Wasf1_5end | |description=CAGE_peak_1_at_Wasf1_5end | ||
|id=chr10:40603625..40603668,+ | |id=chr10:40603625..40603668,+ | ||
|ontology_enrichment_celltype=CL:0000540!5.64e-14!33;CL:0000047!5.64e-14!33;CL:0000031!5.64e-14!33;CL:0000404!5.64e-14!33;CL:0000117!4.48e-13!23;CL:0000337!4.48e-13!23;CL:0000221!1.54e-12!44;CL:0000133!1.54e-12!44;CL:0002319!3.66e-12!43;CL:0000393!3.24e-11!39;CL:0000211!3.24e-11!39;CL:0000055!1.30e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.13e-14,33;CL:0000047,5.13e-14,33;CL:0000031,5.13e-14,33;CL:0000404,5.13e-14,33;CL:0000117,4.10e-13,23;CL:0000337,4.10e-13,23;CL:0000221,1.42e-12,44;CL:0000133,1.42e-12,44;CL:0002319,3.38e-12,43;CL:0000393,3.01e-11,39;CL:0000211,3.01e-11,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.02e-29!73;UBERON:0005743!1.02e-29!73;UBERON:0000073!3.81e-29!75;UBERON:0001016!3.81e-29!75;UBERON:0004121!6.94e-27!102;UBERON:0000924!6.94e-27!102;UBERON:0006601!6.94e-27!102;UBERON:0002346!3.97e-24!71;UBERON:0003075!3.97e-24!71;UBERON:0007284!3.97e-24!71;UBERON:0000033!7.58e-24!63;UBERON:0001049!1.28e-23!52;UBERON:0005068!1.28e-23!52;UBERON:0006241!1.28e-23!52;UBERON:0007135!1.28e-23!52;UBERON:0000955!1.74e-22!50;UBERON:0006238!1.74e-22!50;UBERON:0002616!8.09e-22!49;UBERON:0003056!2.82e-21!49;UBERON:0003080!6.21e-19!40;UBERON:0002020!6.29e-19!34;UBERON:0002780!1.97e-18!39;UBERON:0001890!1.97e-18!39;UBERON:0006240!1.97e-18!39;UBERON:0002791!3.22e-16!29;UBERON:0003528!3.22e-16!29;UBERON:0001893!3.22e-16!29;UBERON:0000956!6.67e-12!21;UBERON:0001869!6.67e-12!21;UBERON:0000203!6.67e-12!21;UBERON:0000153!7.39e-12!94;UBERON:0007811!7.55e-11!86;UBERON:0002619!9.89e-10!17;UBERON:0002021!4.27e-08!10;UBERON:0000411!4.27e-08!10;UBERON:0001950!4.27e-08!10;UBERON:0000468!5.08e-08!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.20e-30,73;UBERON:0001016,3.08e-29,75;UBERON:0004121,9.23e-29,95;UBERON:0000924,9.23e-29,95;UBERON:0006601,9.23e-29,95;UBERON:0002346,1.08e-26,64;UBERON:0003075,1.08e-26,64;UBERON:0007284,1.08e-26,64;UBERON:0010371,3.65e-25,73;UBERON:0000073,8.33e-25,54;UBERON:0001049,1.09e-23,52;UBERON:0005068,1.09e-23,52;UBERON:0006241,1.09e-23,52;UBERON:0007135,1.09e-23,52;UBERON:0003056,2.43e-21,49;UBERON:0000955,5.95e-21,47;UBERON:0006238,5.95e-21,47;UBERON:0002616,2.71e-20,46;UBERON:0010314,1.46e-19,92;UBERON:0003080,5.44e-19,40;UBERON:0002020,5.51e-19,34;UBERON:0002780,1.73e-18,39;UBERON:0001890,1.73e-18,39;UBERON:0006240,1.73e-18,39;UBERON:0003528,2.87e-16,29;UBERON:0002791,2.87e-16,29;UBERON:0001893,2.87e-16,29;UBERON:0000956,6.16e-12,21;UBERON:0001869,6.16e-12,21;UBERON:0000203,6.16e-12,21;UBERON:0002619,9.29e-10,17;UBERON:0002021,4.06e-08,10;UBERON:0000411,4.06e-08,10;UBERON:0001950,4.06e-08,10 | |||
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| ||
|short_description=p1@Wasf1 | |short_description=p1@Wasf1 | ||
}} | }} |
Latest revision as of 00:09, 26 September 2015
Short description: | p1@Wasf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Wasf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000105509_5end |
EntrezGene: | Wasf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.13e-14 | 33 |
neuronal stem cell | 5.13e-14 | 33 |
neuroblast | 5.13e-14 | 33 |
electrically signaling cell | 5.13e-14 | 33 |
CNS neuron (sensu Vertebrata) | 4.10e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.10e-13 | 23 |
ectodermal cell | 1.42e-12 | 44 |
neurectodermal cell | 1.42e-12 | 44 |
neural cell | 3.38e-12 | 43 |
electrically responsive cell | 3.01e-11 | 39 |
electrically active cell | 3.01e-11 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.20e-30 | 73 |
nervous system | 3.08e-29 | 75 |
ectoderm-derived structure | 9.23e-29 | 95 |
ectoderm | 9.23e-29 | 95 |
presumptive ectoderm | 9.23e-29 | 95 |
neurectoderm | 1.08e-26 | 64 |
neural plate | 1.08e-26 | 64 |
presumptive neural plate | 1.08e-26 | 64 |
ecto-epithelium | 3.65e-25 | 73 |
regional part of nervous system | 8.33e-25 | 54 |
neural tube | 1.09e-23 | 52 |
neural rod | 1.09e-23 | 52 |
future spinal cord | 1.09e-23 | 52 |
neural keel | 1.09e-23 | 52 |
pre-chordal neural plate | 2.43e-21 | 49 |
brain | 5.95e-21 | 47 |
future brain | 5.95e-21 | 47 |
regional part of brain | 2.71e-20 | 46 |
structure with developmental contribution from neural crest | 1.46e-19 | 92 |
anterior neural tube | 5.44e-19 | 40 |
gray matter | 5.51e-19 | 34 |
regional part of forebrain | 1.73e-18 | 39 |
forebrain | 1.73e-18 | 39 |
future forebrain | 1.73e-18 | 39 |
brain grey matter | 2.87e-16 | 29 |
regional part of telencephalon | 2.87e-16 | 29 |
telencephalon | 2.87e-16 | 29 |
cerebral cortex | 6.16e-12 | 21 |
cerebral hemisphere | 6.16e-12 | 21 |
pallium | 6.16e-12 | 21 |
regional part of cerebral cortex | 9.29e-10 | 17 |
occipital lobe | 4.06e-08 | 10 |
visual cortex | 4.06e-08 | 10 |
neocortex | 4.06e-08 | 10 |