FFCP PHASE1:Mm9::chr10:38853720..38853733,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66337 | |EntrezGene=66337 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CF36 | |UniProt=Q8CF36 | ||
|association_with_transcript=0bp_to_ENSMUST00000135785_5end | |association_with_transcript=0bp_to_ENSMUST00000135785_5end | ||
|cluster_id=chr10:38853720..38853733,- | |||
|description=CAGE_peak_3_at_1700025K23Rik_5end | |description=CAGE_peak_3_at_1700025K23Rik_5end | ||
|id=chr10:38853720..38853733,- | |id=chr10:38853720..38853733,- | ||
|ontology_enrichment_celltype=CL:0000393!1.60e-08!39;CL:0000211!1.60e-08!39;CL:0000540!3.84e-08!33;CL:0000047!3.84e-08!33;CL:0000031!3.84e-08!33;CL:0000404!3.84e-08!33 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.81e-17!73;UBERON:0005743!8.81e-17!73;UBERON:0000073!2.76e-16!75;UBERON:0001016!2.76e-16!75;UBERON:0001049!2.04e-12!52;UBERON:0005068!2.04e-12!52;UBERON:0006241!2.04e-12!52;UBERON:0007135!2.04e-12!52;UBERON:0004121!6.16e-12!102;UBERON:0000924!6.16e-12!102;UBERON:0006601!6.16e-12!102;UBERON:0000955!6.79e-12!50;UBERON:0006238!6.79e-12!50;UBERON:0002346!1.10e-11!71;UBERON:0003075!1.10e-11!71;UBERON:0007284!1.10e-11!71;UBERON:0002616!2.55e-11!49;UBERON:0002020!3.81e-11!34;UBERON:0000033!5.16e-11!63;UBERON:0002791!3.81e-09!29;UBERON:0003528!3.81e-09!29;UBERON:0001893!3.81e-09!29;UBERON:0003080!8.61e-09!40;UBERON:0003056!1.39e-08!49;UBERON:0002780!2.72e-08!39;UBERON:0001890!2.72e-08!39;UBERON:0006240!2.72e-08!39;UBERON:0002021!2.04e-07!10;UBERON:0000411!2.04e-07!10;UBERON:0001950!2.04e-07!10;UBERON:0000025!3.39e-07!114;UBERON:0000956!4.16e-07!21;UBERON:0001869!4.16e-07!21;UBERON:0000203!4.16e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.39e-17,10;UBERON:0000411,3.39e-17,10;UBERON:0001950,3.39e-17,10;UBERON:0000073,3.79e-16,54;UBERON:0001017,9.35e-16,73;UBERON:0001016,3.63e-15,75;UBERON:0001049,4.98e-14,52;UBERON:0005068,4.98e-14,52;UBERON:0006241,4.98e-14,52;UBERON:0007135,4.98e-14,52;UBERON:0000955,7.31e-13,47;UBERON:0006238,7.31e-13,47;UBERON:0002346,1.19e-11,64;UBERON:0003075,1.19e-11,64;UBERON:0007284,1.19e-11,64;UBERON:0002616,1.26e-11,46;UBERON:0002619,1.58e-11,17;UBERON:0002020,2.57e-11,34;UBERON:0000956,5.77e-11,21;UBERON:0001869,5.77e-11,21;UBERON:0000203,5.77e-11,21;UBERON:0003080,9.66e-11,40;UBERON:0004121,1.18e-10,95;UBERON:0000924,1.18e-10,95;UBERON:0006601,1.18e-10,95;UBERON:0003528,2.56e-10,29;UBERON:0002791,2.56e-10,29;UBERON:0001893,2.56e-10,29;UBERON:0002780,1.29e-09,39;UBERON:0001890,1.29e-09,39;UBERON:0006240,1.29e-09,39;UBERON:0010371,1.39e-09,73;UBERON:0003056,4.22e-08,49 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,20.8356060870121,0.198581902401771,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,0.608261587317087,0.367093504323363,0,0.65407546914134,0.219686182734472,0,0.699932108126813,0,0,0,0,0.257259436035947,0.286533439938757,0,0.606949382578793,0,0.633831403506179,0.338844532069132,0,0.899899717281399,0.988866362566974,0,0.599200221036809,0,0.414758449233911,0.540023753326763,0.210324961351382,0.856952953211411,0.662605622854841,0.61245399607477,0.287536413054709,0,1.10115880999389,1.14918604276669,1.53606533256243,0.131886287730194,0.365950574409639,0.52091337055676,1.95428099300967,0.56276261003168,1.06958773443767,1.17851434189467,1.42371680799103,0.372798891650601,0.151452386666368,0.151143120213571,0.579728977403356,0,0,0,0,0,2.52799956237153,1.53387290320252,2.07828803682295,0.70667914902068,0,2.56652954828636,0,0,0,0,0,3.19714863213368,0.258937883647172,0.445326417194474,0,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0.247194967734374,0.433798070759735,1.76922110389975,0.323533699894818,0.220841518460394,0,0,1.75668478206928,0.209446706813455,0.255457055208591,0,0,0.254140454146129,1.64769703345305,0.915001205637253,0.502617408451458,2.08589184230732,2.30143911597297,2.49345653471472,1.46017136760982,0.203678727700633,0.622034853050465,0.252722758433675,0.210441855886474,0.520481771850815,0.229902104433473,0.540186389416048,0,0.204109497453984,0,0.374806898238915,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0.411564272815887,0.796137067273973,0,0.51469581422943,0,0.207125772535502,0.234526059981096,0.36012412292203,0.473489471170421,0.393528463494808,0.154267112887378,0.465067889500816,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0.486412857275134,0.730999937126662,0.219550115291051,0.402619256281115,1.47202963994889,0.617427674275707,0,0,0.426576501070468,0.464473343720877,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0,0.472905432318573,0.44292937929755,0.159454768657487,0.327726629431476,0,0.289298117163023,0,0,0,0.275936746304732,1.60550589987792,0.703270119553219,0.163934945376675,1.00988370881749,0.631016438832513,1.17131623288992,0.430846795465598,0.716906393857656,1.11399337041197,0.566153061577665,0,0.584511715822624,0.395287777946524,2.24924921495265,0,0.178065603667255,0.651547837414304,0.329940245945071,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0.532020700926821,0.178368817602071,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0,2.41052892613663,0,0.619160603889667,0.555583582109135,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0.954670618015114,0.158167996790568,0.609958401380546,0,0,0,0.404593039154462,0,0.26175594198403,0,0,192.782985029993,0.299033092087958,0.165458490457098,0.194451188344048,0.387479470433193,0.337912250981556,0.352071715937262,0.2604087696879,0,22.9504914784706,67.1109914580827,0,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,0.453460767230423,0.221985953374065,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,2.82375921308533,2.30162618253588,1.71868654031819,1.03111909406213,2.05524755931193,2.2661816921691,0.675022500231806,1.35096360967266,2.71885445390523,2.07104124700728,0.207574695168353,0,0.341467211508268,0,0,0.367687016900028,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,1.52087579934144,0.188626341386076,0.280924522409647,0.256100609619477,0.229741875822453,0.476293691283074,0.347652977834566,0.38581844092741,0,0.294397840268795,0.342869252385415,0,0.476872379894642,0.145346416632329,0.658765662907314,0.169229215783353,0,0.526139422875686,0.543216455383447,0,0.237270036248348,0.29551344712669,0.818462086339379,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.765153328275374,0.882365676478062,0.695603506861264 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,20.8356060870121,0.198581902401771,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,0.608261587317087,0.367093504323363,0,0.65407546914134,0.219686182734472,0,0.699932108126813,0,0,0,0,0.257259436035947,0.286533439938757,0,0.606949382578793,0,0.633831403506179,0.338844532069132,0,0.899899717281399,0.988866362566974,0,0.599200221036809,0,0.414758449233911,0.540023753326763,0.210324961351382,0.856952953211411,0.662605622854841,0.61245399607477,0.287536413054709,0,1.10115880999389,1.14918604276669,1.53606533256243,0.131886287730194,0.365950574409639,0.52091337055676,1.95428099300967,0.56276261003168,1.06958773443767,1.17851434189467,1.42371680799103,0.372798891650601,0.151452386666368,0.151143120213571,0.579728977403356,0,0,0,0,0,2.52799956237153,1.53387290320252,2.07828803682295,0.70667914902068,0,2.56652954828636,0,0,0,0,0,3.19714863213368,0.258937883647172,0.445326417194474,0,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0.247194967734374,0.433798070759735,1.76922110389975,0.323533699894818,0.220841518460394,0,0,1.75668478206928,0.209446706813455,0.255457055208591,0,0,0.254140454146129,1.64769703345305,0.915001205637253,0.502617408451458,2.08589184230732,2.30143911597297,2.49345653471472,1.46017136760982,0.203678727700633,0.622034853050465,0.252722758433675,0.210441855886474,0.520481771850815,0.229902104433473,0.540186389416048,0,0.204109497453984,0,0.374806898238915,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0.411564272815887,0.796137067273973,0,0.51469581422943,0,0.207125772535502,0.234526059981096,0.36012412292203,0.473489471170421,0.393528463494808,0.154267112887378,0.465067889500816,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0.486412857275134,0.730999937126662,0.219550115291051,0.402619256281115,1.47202963994889,0.617427674275707,0,0,0.426576501070468,0.464473343720877,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0,0.472905432318573,0.44292937929755,0.159454768657487,0.327726629431476,0,0.289298117163023,0,0,0,0.275936746304732,1.60550589987792,0.703270119553219,0.163934945376675,1.00988370881749,0.631016438832513,1.17131623288992,0.430846795465598,0.716906393857656,1.11399337041197,0.566153061577665,0,0.584511715822624,0.395287777946524,2.24924921495265,0,0.178065603667255,0.651547837414304,0.329940245945071,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0.532020700926821,0.178368817602071,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0,2.41052892613663,0,0.619160603889667,0.555583582109135,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0.954670618015114,0.158167996790568,0.609958401380546,0,0,0,0.404593039154462,0,0.26175594198403,0,0,192.782985029993,0.299033092087958,0.165458490457098,0.194451188344048,0.387479470433193,0.337912250981556,0.352071715937262,0.2604087696879,0,22.9504914784706,67.1109914580827,0,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,0.453460767230423,0.221985953374065,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,2.82375921308533,2.30162618253588,1.71868654031819,1.03111909406213,2.05524755931193,2.2661816921691,0.675022500231806,1.35096360967266,2.71885445390523,2.07104124700728,0.207574695168353,0,0.341467211508268,0,0,0.367687016900028,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,1.52087579934144,0.188626341386076,0.280924522409647,0.256100609619477,0.229741875822453,0.476293691283074,0.347652977834566,0.38581844092741,0,0.294397840268795,0.342869252385415,0,0.476872379894642,0.145346416632329,0.658765662907314,0.169229215783353,0,0.526139422875686,0.543216455383447,0,0.237270036248348,0.29551344712669,0.818462086339379,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.765153328275374,0.882365676478062,0.695603506861264 | ||
|short_description=p3@1700025K23Rik | |short_description=p3@1700025K23Rik | ||
}} | }} |
Latest revision as of 23:43, 25 September 2015
Short description: | p3@1700025K23Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_1700025K23Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000135785_5end |
EntrezGene: | 1700025K23Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.39e-17 | 10 |
visual cortex | 3.39e-17 | 10 |
neocortex | 3.39e-17 | 10 |
regional part of nervous system | 3.79e-16 | 54 |
central nervous system | 9.35e-16 | 73 |
nervous system | 3.63e-15 | 75 |
neural tube | 4.98e-14 | 52 |
neural rod | 4.98e-14 | 52 |
future spinal cord | 4.98e-14 | 52 |
neural keel | 4.98e-14 | 52 |
brain | 7.31e-13 | 47 |
future brain | 7.31e-13 | 47 |
neurectoderm | 1.19e-11 | 64 |
neural plate | 1.19e-11 | 64 |
presumptive neural plate | 1.19e-11 | 64 |
regional part of brain | 1.26e-11 | 46 |
regional part of cerebral cortex | 1.58e-11 | 17 |
gray matter | 2.57e-11 | 34 |
cerebral cortex | 5.77e-11 | 21 |
cerebral hemisphere | 5.77e-11 | 21 |
pallium | 5.77e-11 | 21 |
anterior neural tube | 9.66e-11 | 40 |
ectoderm-derived structure | 1.18e-10 | 95 |
ectoderm | 1.18e-10 | 95 |
presumptive ectoderm | 1.18e-10 | 95 |
brain grey matter | 2.56e-10 | 29 |
regional part of telencephalon | 2.56e-10 | 29 |
telencephalon | 2.56e-10 | 29 |
regional part of forebrain | 1.29e-09 | 39 |
forebrain | 1.29e-09 | 39 |
future forebrain | 1.29e-09 | 39 |
ecto-epithelium | 1.39e-09 | 73 |
pre-chordal neural plate | 4.22e-08 | 49 |