FFCP PHASE1:Mm9::chr10:21778413..21778445,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:21778413..21778445,- | |||
|description=CAGE_peak_at_chr10:21778413..21778445,- | |description=CAGE_peak_at_chr10:21778413..21778445,- | ||
|id=chr10:21778413..21778445,- | |id=chr10:21778413..21778445,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!9.19e-10!63;UBERON:0000468!1.45e-09!333;UBERON:0002346!5.29e-09!71;UBERON:0003075!5.29e-09!71;UBERON:0007284!5.29e-09!71;UBERON:0003056!1.48e-08!49;UBERON:0002021!6.41e-08!10;UBERON:0000411!6.41e-08!10;UBERON:0001950!6.41e-08!10;UBERON:0000955!1.66e-07!50;UBERON:0006238!1.66e-07!50;UBERON:0000922!1.70e-07!328;UBERON:0002616!4.53e-07!49;UBERON:0001049!9.58e-07!52;UBERON:0005068!9.58e-07!52;UBERON:0006241!9.58e-07!52;UBERON:0007135!9.58e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.21e-09,64;UBERON:0003075,1.21e-09,64;UBERON:0007284,1.21e-09,64;UBERON:0003056,1.24e-09,49;UBERON:0002021,2.15e-09,10;UBERON:0000411,2.15e-09,10;UBERON:0001950,2.15e-09,10;UBERON:0000955,6.14e-09,47;UBERON:0006238,6.14e-09,47;UBERON:0002616,2.16e-08,46;UBERON:0001049,2.45e-08,52;UBERON:0005068,2.45e-08,52;UBERON:0006241,2.45e-08,52;UBERON:0007135,2.45e-08,52;UBERON:0000073,5.51e-08,54;UBERON:0010371,8.78e-08,73;UBERON:0003080,3.78e-07,40;UBERON:0002553,9.17e-07,39 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99481574430191,0.816677425049476,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0.878744730937887,0,0.279972843250725,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0.677689064138264,0,0,0.988866362566974,0,0,0,0.311068836925433,0,0.210324961351382,1.42825492201902,3.09215957332259,0.244981598429908,0.287536413054709,0,0,3.83062014255563,1.0752457327937,0.791317726381163,0.182975287204819,0,3.35019598801657,1.68828783009504,0,0,0.142371680799103,0,0.227178579999552,0.226714680320357,0,0,0,1.07940638327563,1.29955283489534,1.79210754838934,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,2.3750742250372,1.04091196059682,1.52232739156071,1.15307748628029,1.80867168663147,2.58695155698551,1.50799909595611,0,4.04878199375753,1.76922110389975,0.808834249737046,0.220841518460394,0,3.72783522436244,3.80615036115011,2.93225389538837,0,0,2.99951365496704,0,12.8819949888148,8.23501085073528,2.26177833803156,13.9059456153821,8.43861009190091,10.1816141834184,9.89671704713322,0.611036183101898,0.248813941220186,3.0326731012041,2.31486041475121,2.86264974517948,2.75882525320168,2.88099407688559,1.35634336052144,1.08858398642125,1.66547836370305,1.03071897015702,1.81092359517311,0.646703978798527,0.945530400839096,1.05570674498369,1.31517439456545,1.66828349535359,1.0447564995665,0.205782136407943,1.19420560091096,1.40442637462647,1.02939162845886,0.568326998791185,1.65700618028402,1.17263029990548,0.180062061461015,0.710234206755631,0.787056926989615,1.07986979021165,0.465067889500816,0.536546802799238,0.116765342367169,0.329119699826961,0,0.243206428637567,0.292399974850665,0.658650345873152,0.134206418760372,15.1408762966172,2.26390147234426,0.330418782983798,0.528901133327089,0.426576501070468,0.696710015581316,0.77320476793256,1.4117846723634,0.889512175379481,0.760902504450237,0,0.494096864172033,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0.398282546508734,3.03468641524931,1.71372768914593,2.25415471346161,0.814605311381257,1.35766741017338,1.05203729835478,1.70738650235495,1.03327103585722,0.784993639206874,0.740382983530803,0.889357881261447,0.333690211432188,0.982794975566015,1.12431056192427,0.608580364165509,1.20588579876208,1.52775511068852,0.863088412352432,0.648540907100142,2.47105271869273,5.75072826109418,2.60498663367952,1.87222603868736,3.53610429125956,3.76734568396016,0.482443521363367,0.184753190166605,1.70542270593436,1.14075483509418,0.509235257325564,0.704070744865506,0.335012514883631,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,1.96705709207614,1.65562047782839,11.7201930691088,8.43924143463863,0,1.51482556322624,0,0,0.430846795465598,0.238968797952552,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0,6.42642632843614,2.55492153374884,3.38324646967785,2.11753047159649,1.81467135269789,3.98235415019888,3.39892890616974,2.41858845571801,0.943025398779491,2.06711325016541,3.3817866273832,1.03371317267288,2.18120237686503,1.78248689192361,2.21225730555071,4.21674434299995,2.06271086496374,1.02131881726136,1.26042765821917,1.4229455216103,1.07168517515796,1.41872186913819,2.14042581122485,0.987294123612726,1.522324745573,0.23467170806371,0.42366414172764,0.441056796109924,0.98931751764888,0.484393280087717,0.0603129249281559,0.119372344003136,0,0.291480836629851,8.15871328846243,0,0.82554747185289,0,0,0.27338845544205,0.228778173206523,0.339956859987711,0.279902904647316,0,0,2.37251995185852,1.42323626988794,0.756037385752609,0.209088296014469,1.09181281873089,0.539457385539283,0.578574190077352,0.785267825952089,0,1.86401793926078,2.25477175473676,1.79419855252775,3.14371131868485,1.55560950675238,1.29159823477731,1.85851738039856,1.40828686374905,3.1249052362548,5.87212328783981,3.62376181239009,2.01621004380506,0.316011120628178,0.405450430580328,0.513554785824136,0.389762468933385,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0,1.13365191807606,10.6553257619551,0.179427713218951,4.86865387455827,0.579568782096571,0.750729901804728,0.36630324853453,0,1.50471631210609,19.2015626489803,8.28585425712918,7.44764167471216,6.53042092906013,8.90607275701835,10.5755145634558,8.77529250301348,10.3573876741571,12.6879874515577,10.8729665467882,1.66059756134683,1.19707462020309,1.87806966329548,0.486213434136588,2.51535795153579,0.551530525350042,2.889207461421,1.64828045791115,3.53011130550997,1.26348605881899,2.78827229879264,2.26351609663291,1.40462261204824,1.02440243847791,1.89537047553524,1.90517476513229,1.15884325944855,1.35036454324594,0.824171801606613,1.32479028120958,2.05721551431249,1.24233064311536,1.90748951957857,1.30811774969096,1.59985946706062,1.77690676572521,1.82927972872773,0.789209134313529,1.62964936615034,1.12228454331548,0.830445126869219,0.985044823755635,0.409231043169689,0.619747364743864,1.54325288784913,1.99848462350357,0.233931608445408,0.644613162144895,1.91288332068843,0.220591419119515,0.927471342481686 | |phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99481574430191,0.816677425049476,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0.878744730937887,0,0.279972843250725,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0.677689064138264,0,0,0.988866362566974,0,0,0,0.311068836925433,0,0.210324961351382,1.42825492201902,3.09215957332259,0.244981598429908,0.287536413054709,0,0,3.83062014255563,1.0752457327937,0.791317726381163,0.182975287204819,0,3.35019598801657,1.68828783009504,0,0,0.142371680799103,0,0.227178579999552,0.226714680320357,0,0,0,1.07940638327563,1.29955283489534,1.79210754838934,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,2.3750742250372,1.04091196059682,1.52232739156071,1.15307748628029,1.80867168663147,2.58695155698551,1.50799909595611,0,4.04878199375753,1.76922110389975,0.808834249737046,0.220841518460394,0,3.72783522436244,3.80615036115011,2.93225389538837,0,0,2.99951365496704,0,12.8819949888148,8.23501085073528,2.26177833803156,13.9059456153821,8.43861009190091,10.1816141834184,9.89671704713322,0.611036183101898,0.248813941220186,3.0326731012041,2.31486041475121,2.86264974517948,2.75882525320168,2.88099407688559,1.35634336052144,1.08858398642125,1.66547836370305,1.03071897015702,1.81092359517311,0.646703978798527,0.945530400839096,1.05570674498369,1.31517439456545,1.66828349535359,1.0447564995665,0.205782136407943,1.19420560091096,1.40442637462647,1.02939162845886,0.568326998791185,1.65700618028402,1.17263029990548,0.180062061461015,0.710234206755631,0.787056926989615,1.07986979021165,0.465067889500816,0.536546802799238,0.116765342367169,0.329119699826961,0,0.243206428637567,0.292399974850665,0.658650345873152,0.134206418760372,15.1408762966172,2.26390147234426,0.330418782983798,0.528901133327089,0.426576501070468,0.696710015581316,0.77320476793256,1.4117846723634,0.889512175379481,0.760902504450237,0,0.494096864172033,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0.398282546508734,3.03468641524931,1.71372768914593,2.25415471346161,0.814605311381257,1.35766741017338,1.05203729835478,1.70738650235495,1.03327103585722,0.784993639206874,0.740382983530803,0.889357881261447,0.333690211432188,0.982794975566015,1.12431056192427,0.608580364165509,1.20588579876208,1.52775511068852,0.863088412352432,0.648540907100142,2.47105271869273,5.75072826109418,2.60498663367952,1.87222603868736,3.53610429125956,3.76734568396016,0.482443521363367,0.184753190166605,1.70542270593436,1.14075483509418,0.509235257325564,0.704070744865506,0.335012514883631,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,1.96705709207614,1.65562047782839,11.7201930691088,8.43924143463863,0,1.51482556322624,0,0,0.430846795465598,0.238968797952552,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0,6.42642632843614,2.55492153374884,3.38324646967785,2.11753047159649,1.81467135269789,3.98235415019888,3.39892890616974,2.41858845571801,0.943025398779491,2.06711325016541,3.3817866273832,1.03371317267288,2.18120237686503,1.78248689192361,2.21225730555071,4.21674434299995,2.06271086496374,1.02131881726136,1.26042765821917,1.4229455216103,1.07168517515796,1.41872186913819,2.14042581122485,0.987294123612726,1.522324745573,0.23467170806371,0.42366414172764,0.441056796109924,0.98931751764888,0.484393280087717,0.0603129249281559,0.119372344003136,0,0.291480836629851,8.15871328846243,0,0.82554747185289,0,0,0.27338845544205,0.228778173206523,0.339956859987711,0.279902904647316,0,0,2.37251995185852,1.42323626988794,0.756037385752609,0.209088296014469,1.09181281873089,0.539457385539283,0.578574190077352,0.785267825952089,0,1.86401793926078,2.25477175473676,1.79419855252775,3.14371131868485,1.55560950675238,1.29159823477731,1.85851738039856,1.40828686374905,3.1249052362548,5.87212328783981,3.62376181239009,2.01621004380506,0.316011120628178,0.405450430580328,0.513554785824136,0.389762468933385,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0,1.13365191807606,10.6553257619551,0.179427713218951,4.86865387455827,0.579568782096571,0.750729901804728,0.36630324853453,0,1.50471631210609,19.2015626489803,8.28585425712918,7.44764167471216,6.53042092906013,8.90607275701835,10.5755145634558,8.77529250301348,10.3573876741571,12.6879874515577,10.8729665467882,1.66059756134683,1.19707462020309,1.87806966329548,0.486213434136588,2.51535795153579,0.551530525350042,2.889207461421,1.64828045791115,3.53011130550997,1.26348605881899,2.78827229879264,2.26351609663291,1.40462261204824,1.02440243847791,1.89537047553524,1.90517476513229,1.15884325944855,1.35036454324594,0.824171801606613,1.32479028120958,2.05721551431249,1.24233064311536,1.90748951957857,1.30811774969096,1.59985946706062,1.77690676572521,1.82927972872773,0.789209134313529,1.62964936615034,1.12228454331548,0.830445126869219,0.985044823755635,0.409231043169689,0.619747364743864,1.54325288784913,1.99848462350357,0.233931608445408,0.644613162144895,1.91288332068843,0.220591419119515,0.927471342481686 | ||
|short_description=p@chr10:21778413..21778445,- | |short_description=p@chr10:21778413..21778445,- | ||
}} | }} |
Latest revision as of 06:01, 4 August 2015
Short description: | p@chr10:21778413..21778445, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:21778413..21778445, - |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.21e-09 | 64 |
neural plate | 1.21e-09 | 64 |
presumptive neural plate | 1.21e-09 | 64 |
pre-chordal neural plate | 1.24e-09 | 49 |
occipital lobe | 2.15e-09 | 10 |
visual cortex | 2.15e-09 | 10 |
neocortex | 2.15e-09 | 10 |
brain | 6.14e-09 | 47 |
future brain | 6.14e-09 | 47 |
regional part of brain | 2.16e-08 | 46 |
neural tube | 2.45e-08 | 52 |
neural rod | 2.45e-08 | 52 |
future spinal cord | 2.45e-08 | 52 |
neural keel | 2.45e-08 | 52 |
regional part of nervous system | 5.51e-08 | 54 |
ecto-epithelium | 8.78e-08 | 73 |
anterior neural tube | 3.78e-07 | 40 |
anatomical cavity | 9.17e-07 | 39 |