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{{f5samples
{{f5samples
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|DRA_sample_Accession=CAGE@SAMD00005394
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000040,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000557,CL:0000559,CL:0000566,CL:0000576,CL:0000723,CL:0000738,CL:0000763,CL:0000766,CL:0000837,CL:0000839,CL:0000860,CL:0000988,CL:0001012,CL:0002009,CL:0002031,CL:0002032,CL:0002057,CL:0002087,CL:0002194,CL:0002320,CL:0002371,CL:0002393,CL:0002397
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005394
|accession_numbers=CAGE;DRX008127;DRR008999;DRZ000424;DRZ001809;DRZ011774;DRZ013159
|accession_numbers_RNASeq=sRNA-Seq;DRX037117;DRR041483;DRZ007125
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|data_phase=2
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|def=
|def=
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|fonse_treatment_closure=
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|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520Monocytes%252c%2520donor2.CNhs11954.11305-117B9.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520Monocytes%252c%2520donor2.CNhs11954.11305-117B9.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520Monocytes%252c%2520donor2.CNhs11954.11305-117B9.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520Monocytes%252c%2520donor2.CNhs11954.11305-117B9.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520Monocytes%252c%2520donor2.CNhs11954.11305-117B9.hg38.nobarcode.ctss.bed.gz
|id=FF:11305-117B9
|id=FF:11305-117B9
|is_a=EFO:0002091;;FF:0000002;;FF:0000024;;FF:0000210
|is_a=EFO:0002091;;FF:0000024
|is_obsolete=
|library_id=CNhs11954
|library_id_phase_based=2:CNhs11954
|microRNAs=
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|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11305
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10008.CTTGTA.11305
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11305
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10008.CTTGTA.11305
|name=CD14+ Monocytes, donor2
|name=CD14+ Monocytes, donor2
|namespace=FANTOM5
|namespace=FANTOM5
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|profile_cagescan=,,,
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|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=117
|rna_box=117
|rna_catalog_number=3H100-30-10
|rna_catalog_number=3H100-30-10
Line 56: Line 82:
|rna_tube_id=117B9
|rna_tube_id=117B9
|rna_weight_ug=10
|rna_weight_ug=10
|rnaseq_library_id=SRhi10008.CTTGTA
|sample_age=57
|sample_age=57
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_line=
Line 69: Line 97:
|sample_ethnicity=C
|sample_ethnicity=C
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.41287427923216e-246!GO:0043227;membrane-bound organelle;2.62949663485785e-136!GO:0043231;intracellular membrane-bound organelle;5.1017026666545e-136!GO:0043226;organelle;2.28042370569053e-128!GO:0043229;intracellular organelle;1.451422155989e-127!GO:0005737;cytoplasm;4.26431475453605e-125!GO:0044444;cytoplasmic part;8.65751287784496e-77!GO:0044422;organelle part;4.07925750208468e-76!GO:0005515;protein binding;2.04292720728254e-75!GO:0043170;macromolecule metabolic process;1.29066587793988e-74!GO:0044446;intracellular organelle part;1.29066587793988e-74!GO:0044237;cellular metabolic process;2.5028442017156e-74!GO:0044238;primary metabolic process;4.56888542830936e-74!GO:0005634;nucleus;1.52942197927128e-65!GO:0032991;macromolecular complex;4.07922859671534e-58!GO:0003723;RNA binding;1.59717779401635e-55!GO:0044428;nuclear part;3.31638008460869e-54!GO:0019538;protein metabolic process;5.55891657727426e-49!GO:0043283;biopolymer metabolic process;9.73189968488613e-49!GO:0030529;ribonucleoprotein complex;1.34031320948109e-46!GO:0044267;cellular protein metabolic process;1.03871835906884e-45!GO:0044260;cellular macromolecule metabolic process;2.0799350754667e-45!GO:0033036;macromolecule localization;7.96667670134446e-43!GO:0043233;organelle lumen;1.61948616045595e-42!GO:0031974;membrane-enclosed lumen;1.61948616045595e-42!GO:0015031;protein transport;1.9410407564564e-41!GO:0045184;establishment of protein localization;9.47008509803447e-41!GO:0010467;gene expression;1.27792563188103e-40!GO:0008104;protein localization;2.24239867893169e-39!GO:0006412;translation;2.16592066191457e-37!GO:0031981;nuclear lumen;2.30928248413604e-34!GO:0016071;mRNA metabolic process;3.17209035655839e-33!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.38578181379404e-33!GO:0031090;organelle membrane;9.31020699692798e-33!GO:0006915;apoptosis;1.98739471545774e-31!GO:0012501;programmed cell death;2.0189271252874e-31!GO:0016043;cellular component organization and biogenesis;2.13050468440953e-31!GO:0006396;RNA processing;2.55303608223222e-31!GO:0005829;cytosol;1.57101530728151e-30!GO:0043234;protein complex;1.74935115612354e-30!GO:0008219;cell death;6.47458393153093e-30!GO:0016265;death;6.47458393153093e-30!GO:0046907;intracellular transport;1.3840277917485e-28!GO:0008380;RNA splicing;1.40699988801528e-28!GO:0009059;macromolecule biosynthetic process;2.50641163424933e-28!GO:0006886;intracellular protein transport;4.90552781487729e-27!GO:0006397;mRNA processing;1.04514735206162e-26!GO:0005739;mitochondrion;2.40928941091613e-26!GO:0009058;biosynthetic process;3.63296002744888e-25!GO:0031967;organelle envelope;3.66286420330344e-25!GO:0031975;envelope;5.69171687928601e-25!GO:0000166;nucleotide binding;2.98072110065033e-24!GO:0005654;nucleoplasm;4.00611670223861e-24!GO:0044249;cellular biosynthetic process;4.30658411666922e-24!GO:0005840;ribosome;1.11069420013704e-23!GO:0043412;biopolymer modification;2.19147019197937e-23!GO:0065003;macromolecular complex assembly;3.31871891413481e-23!GO:0008134;transcription factor binding;2.51092768431312e-22!GO:0003676;nucleic acid binding;6.17968252816535e-22!GO:0051649;establishment of cellular localization;6.17968252816535e-22!GO:0051641;cellular localization;1.39657711368593e-21!GO:0005681;spliceosome;2.73820201749423e-21!GO:0050794;regulation of cellular process;2.76470798847711e-21!GO:0006464;protein modification process;2.78985172588788e-21!GO:0003735;structural constituent of ribosome;4.08471233637832e-21!GO:0016070;RNA metabolic process;5.26570919527405e-21!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.71555323665489e-21!GO:0033279;ribosomal subunit;6.25387617028926e-21!GO:0044451;nucleoplasm part;8.89985704619498e-21!GO:0042981;regulation of apoptosis;8.9662895805114e-21!GO:0043687;post-translational protein modification;1.25455854818305e-20!GO:0043067;regulation of programmed cell death;1.80063296647036e-20!GO:0022607;cellular component assembly;1.98720511921748e-20!GO:0044429;mitochondrial part;7.37978917836227e-20!GO:0006512;ubiquitin cycle;9.2054349694161e-20!GO:0048523;negative regulation of cellular process;1.33264412068429e-18!GO:0006996;organelle organization and biogenesis;2.79832180929084e-18!GO:0044445;cytosolic part;2.96448818621876e-18!GO:0032553;ribonucleotide binding;3.97995282504958e-18!GO:0032555;purine ribonucleotide binding;3.97995282504958e-18!GO:0007243;protein kinase cascade;4.80069987720709e-18!GO:0007242;intracellular signaling cascade;2.0592768313091e-17!GO:0044265;cellular macromolecule catabolic process;2.14584011605706e-17!GO:0050789;regulation of biological process;2.85145965854655e-17!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.8889263933365e-17!GO:0017076;purine nucleotide binding;4.72579126802119e-17!GO:0016192;vesicle-mediated transport;6.7640378165323e-17!GO:0048519;negative regulation of biological process;3.38513403340017e-16!GO:0006793;phosphorus metabolic process;3.78095434756476e-16!GO:0006796;phosphate metabolic process;3.78095434756476e-16!GO:0006259;DNA metabolic process;5.75893468258677e-16!GO:0019941;modification-dependent protein catabolic process;7.14538964876098e-16!GO:0043632;modification-dependent macromolecule catabolic process;7.14538964876098e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;8.08622476267011e-16!GO:0006511;ubiquitin-dependent protein catabolic process;8.08622476267011e-16!GO:0044257;cellular protein catabolic process;1.06377976481148e-15!GO:0006605;protein targeting;1.61577499868758e-15!GO:0016462;pyrophosphatase activity;2.53592062882267e-15!GO:0006913;nucleocytoplasmic transport;2.62595474147694e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.73661002700158e-15!GO:0017111;nucleoside-triphosphatase activity;3.12559199232025e-15!GO:0005740;mitochondrial envelope;3.12559199232025e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;3.42790332625262e-15!GO:0051169;nuclear transport;6.2256773137512e-15!GO:0016604;nuclear body;6.59462333571403e-15!GO:0031966;mitochondrial membrane;8.60517517425566e-15!GO:0002376;immune system process;1.01461985987422e-14!GO:0043285;biopolymer catabolic process;1.31550653301679e-14!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.67171576038206e-14!GO:0022618;protein-RNA complex assembly;2.63468059081771e-14!GO:0065007;biological regulation;2.67145609341329e-14!GO:0006119;oxidative phosphorylation;2.70401792399671e-14!GO:0006366;transcription from RNA polymerase II promoter;2.81800044643136e-14!GO:0005524;ATP binding;3.31871232003321e-14!GO:0016310;phosphorylation;3.83883048043946e-14!GO:0016874;ligase activity;5.16998810938847e-14!GO:0003712;transcription cofactor activity;6.87867676448529e-14!GO:0032559;adenyl ribonucleotide binding;7.79549705098608e-14!GO:0048770;pigment granule;1.25106213494555e-13!GO:0042470;melanosome;1.25106213494555e-13!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.55392906513923e-13!GO:0019866;organelle inner membrane;1.60053909735042e-13!GO:0065009;regulation of a molecular function;2.5277752909893e-13!GO:0016607;nuclear speck;3.94014435091243e-13!GO:0005773;vacuole;4.1694771892635e-13!GO:0005794;Golgi apparatus;4.2065790370099e-13!GO:0012505;endomembrane system;7.85315748356294e-13!GO:0009057;macromolecule catabolic process;8.70298854576704e-13!GO:0030554;adenyl nucleotide binding;1.03903917088571e-12!GO:0051246;regulation of protein metabolic process;1.03903917088571e-12!GO:0008135;translation factor activity, nucleic acid binding;1.18195512567924e-12!GO:0005768;endosome;1.84757974712787e-12!GO:0044248;cellular catabolic process;2.58830777196399e-12!GO:0043069;negative regulation of programmed cell death;2.92505169727693e-12!GO:0019222;regulation of metabolic process;3.04809169163568e-12!GO:0043066;negative regulation of apoptosis;3.62421393783836e-12!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.48606614188081e-12!GO:0000323;lytic vacuole;7.61342527856471e-12!GO:0005764;lysosome;7.61342527856471e-12!GO:0030163;protein catabolic process;1.15235194509569e-11!GO:0007049;cell cycle;2.82344278492302e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.38517640146742e-11!GO:0031324;negative regulation of cellular metabolic process;5.71332598197154e-11!GO:0015935;small ribosomal subunit;5.73700402921e-11!GO:0015934;large ribosomal subunit;5.886792488011e-11!GO:0005743;mitochondrial inner membrane;6.63510945383594e-11!GO:0006916;anti-apoptosis;9.37734476099611e-11!GO:0006955;immune response;1.53083255124672e-10!GO:0005635;nuclear envelope;1.62267061928555e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.92212182002725e-10!GO:0008639;small protein conjugating enzyme activity;2.24685685034128e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;2.47265289420748e-10!GO:0048522;positive regulation of cellular process;2.47265289420748e-10!GO:0016564;transcription repressor activity;2.55605105898364e-10!GO:0017038;protein import;2.89696164130292e-10!GO:0004842;ubiquitin-protein ligase activity;3.35836251943005e-10!GO:0003743;translation initiation factor activity;3.41661994173492e-10!GO:0005730;nucleolus;4.28169368477499e-10!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.40298076494263e-10!GO:0019899;enzyme binding;5.49973389272434e-10!GO:0006413;translational initiation;5.80611104963622e-10!GO:0019787;small conjugating protein ligase activity;1.04008858729012e-09!GO:0009892;negative regulation of metabolic process;1.12944274495441e-09!GO:0006323;DNA packaging;1.18711916133034e-09!GO:0043228;non-membrane-bound organelle;1.20206417420064e-09!GO:0043232;intracellular non-membrane-bound organelle;1.20206417420064e-09!GO:0050790;regulation of catalytic activity;1.26522413204647e-09!GO:0006446;regulation of translational initiation;1.35735662381021e-09!GO:0007264;small GTPase mediated signal transduction;1.3687119280698e-09!GO:0000502;proteasome complex (sensu Eukaryota);1.57762007761428e-09!GO:0031965;nuclear membrane;1.72668744048739e-09!GO:0044455;mitochondrial membrane part;1.73122331146033e-09!GO:0006457;protein folding;1.76180699278268e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.90399636832968e-09!GO:0000375;RNA splicing, via transesterification reactions;1.90399636832968e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.90399636832968e-09!GO:0009967;positive regulation of signal transduction;2.22306698662274e-09!GO:0031323;regulation of cellular metabolic process;2.23755003369013e-09!GO:0006606;protein import into nucleus;2.40111182337067e-09!GO:0048518;positive regulation of biological process;2.60167108147196e-09!GO:0051170;nuclear import;2.63353533525725e-09!GO:0016568;chromatin modification;2.63353533525725e-09!GO:0051726;regulation of cell cycle;2.77693489322229e-09!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.56096430786532e-09!GO:0006417;regulation of translation;4.03836338315641e-09!GO:0000074;regulation of progression through cell cycle;4.14139709325953e-09!GO:0045786;negative regulation of progression through cell cycle;6.47104690061863e-09!GO:0009966;regulation of signal transduction;6.91175478880953e-09!GO:0016481;negative regulation of transcription;8.99188220645478e-09!GO:0048193;Golgi vesicle transport;9.57353162773092e-09!GO:0044453;nuclear membrane part;9.65313797851042e-09!GO:0043065;positive regulation of apoptosis;9.93706317856166e-09!GO:0016563;transcription activator activity;1.27755115280457e-08!GO:0043068;positive regulation of programmed cell death;1.36258855644884e-08!GO:0042623;ATPase activity, coupled;1.53586880130333e-08!GO:0006950;response to stress;1.58914294748444e-08!GO:0004386;helicase activity;1.66600484996222e-08!GO:0009615;response to virus;2.01591142331577e-08!GO:0003713;transcription coactivator activity;2.10059892713815e-08!GO:0051276;chromosome organization and biogenesis;2.50270314140601e-08!GO:0005746;mitochondrial respiratory chain;2.66799930651849e-08!GO:0019829;cation-transporting ATPase activity;2.94034125052153e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.42410606521216e-08!GO:0008047;enzyme activator activity;3.4774208047057e-08!GO:0016787;hydrolase activity;3.66504184251063e-08!GO:0016887;ATPase activity;3.76927190518583e-08!GO:0005783;endoplasmic reticulum;4.22519357191934e-08!GO:0016740;transferase activity;4.64532560107075e-08!GO:0004674;protein serine/threonine kinase activity;4.68783239481038e-08!GO:0030695;GTPase regulator activity;4.80165452165612e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.35258696587195e-08!GO:0006917;induction of apoptosis;7.48602102748752e-08!GO:0010468;regulation of gene expression;8.37652854961685e-08!GO:0050657;nucleic acid transport;8.46838637299568e-08!GO:0051236;establishment of RNA localization;8.46838637299568e-08!GO:0050658;RNA transport;8.46838637299568e-08!GO:0008026;ATP-dependent helicase activity;9.41983003886365e-08!GO:0009889;regulation of biosynthetic process;9.8183478214705e-08!GO:0006403;RNA localization;1.22259485998798e-07!GO:0012502;induction of programmed cell death;1.28793857282464e-07!GO:0016881;acid-amino acid ligase activity;1.33623884394918e-07!GO:0031326;regulation of cellular biosynthetic process;1.36975778460213e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.42521060848836e-07!GO:0050136;NADH dehydrogenase (quinone) activity;1.4938691157717e-07!GO:0003954;NADH dehydrogenase activity;1.4938691157717e-07!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.4938691157717e-07!GO:0048468;cell development;1.61205485276613e-07!GO:0051186;cofactor metabolic process;1.6851493288082e-07!GO:0044440;endosomal part;2.35612205969322e-07!GO:0010008;endosome membrane;2.35612205969322e-07!GO:0015986;ATP synthesis coupled proton transport;2.58238685671375e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.58238685671375e-07!GO:0045321;leukocyte activation;2.80195971742229e-07!GO:0006461;protein complex assembly;2.98904144415999e-07!GO:0005770;late endosome;3.11754695223776e-07!GO:0003714;transcription corepressor activity;3.27234040093744e-07!GO:0009152;purine ribonucleotide biosynthetic process;3.52595371955964e-07!GO:0044432;endoplasmic reticulum part;3.96802818952457e-07!GO:0006974;response to DNA damage stimulus;4.0831530444124e-07!GO:0006357;regulation of transcription from RNA polymerase II promoter;4.10932488857686e-07!GO:0051082;unfolded protein binding;4.13597919309122e-07!GO:0022402;cell cycle process;4.1465007370225e-07!GO:0006350;transcription;5.58427425562039e-07!GO:0007265;Ras protein signal transduction;6.11110663740683e-07!GO:0005643;nuclear pore;6.31309565143347e-07!GO:0009056;catabolic process;6.80980134823726e-07!GO:0009260;ribonucleotide biosynthetic process;6.95518432441452e-07!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.17091937439018e-07!GO:0006164;purine nucleotide biosynthetic process;7.31993554956324e-07!GO:0005793;ER-Golgi intermediate compartment;7.31993554956324e-07!GO:0009259;ribonucleotide metabolic process;8.70955512253561e-07!GO:0006732;coenzyme metabolic process;8.87578868749048e-07!GO:0016301;kinase activity;1.00636104221023e-06!GO:0009150;purine ribonucleotide metabolic process;1.03779004286114e-06!GO:0005525;GTP binding;1.05065022644117e-06!GO:0003924;GTPase activity;1.09529653128697e-06!GO:0016773;phosphotransferase activity, alcohol group as acceptor;1.19684984628939e-06!GO:0032446;protein modification by small protein conjugation;1.26583409926093e-06!GO:0005083;small GTPase regulator activity;1.30025533906235e-06!GO:0042775;organelle ATP synthesis coupled electron transport;1.30025533906235e-06!GO:0042773;ATP synthesis coupled electron transport;1.30025533906235e-06!GO:0005774;vacuolar membrane;1.32481733876785e-06!GO:0005096;GTPase activator activity;1.42965876403157e-06!GO:0051028;mRNA transport;1.55279498757918e-06!GO:0008565;protein transporter activity;1.58492603614162e-06!GO:0042110;T cell activation;1.59769471371196e-06!GO:0006163;purine nucleotide metabolic process;1.78666792300857e-06!GO:0031980;mitochondrial lumen;1.85863192948643e-06!GO:0005759;mitochondrial matrix;1.85863192948643e-06!GO:0030964;NADH dehydrogenase complex (quinone);2.22128802302945e-06!GO:0045271;respiratory chain complex I;2.22128802302945e-06!GO:0005747;mitochondrial respiratory chain complex I;2.22128802302945e-06!GO:0016567;protein ubiquitination;2.26285626592437e-06!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.05761701591142e-06!GO:0046649;lymphocyte activation;3.12944265072283e-06!GO:0006754;ATP biosynthetic process;3.27740621546361e-06!GO:0006753;nucleoside phosphate metabolic process;3.27740621546361e-06!GO:0031252;leading edge;3.58249304857436e-06!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.80455620453352e-06!GO:0016197;endosome transport;4.17239191137894e-06!GO:0051336;regulation of hydrolase activity;5.36959917719577e-06!GO:0016469;proton-transporting two-sector ATPase complex;5.41921627637562e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.75115966866942e-06!GO:0015078;hydrogen ion transmembrane transporter activity;5.87490436693211e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.93581647068523e-06!GO:0009142;nucleoside triphosphate biosynthetic process;6.30274089215901e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.30274089215901e-06!GO:0044437;vacuolar part;6.31163296763818e-06!GO:0005789;endoplasmic reticulum membrane;6.64122276034335e-06!GO:0008632;apoptotic program;6.70430050912737e-06!GO:0005765;lysosomal membrane;7.59452186585951e-06!GO:0016044;membrane organization and biogenesis;8.22719043659306e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;8.36477838744603e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;8.36477838744603e-06!GO:0060090;molecular adaptor activity;1.13422666089713e-05!GO:0048475;coated membrane;1.51203985102006e-05!GO:0030117;membrane coat;1.51203985102006e-05!GO:0030097;hemopoiesis;1.65334848366587e-05!GO:0030120;vesicle coat;1.65619886720081e-05!GO:0030662;coated vesicle membrane;1.65619886720081e-05!GO:0046930;pore complex;1.67011901162637e-05!GO:0003697;single-stranded DNA binding;1.68145793522197e-05!GO:0006401;RNA catabolic process;1.68290628654737e-05!GO:0043566;structure-specific DNA binding;1.79129190695445e-05!GO:0006281;DNA repair;1.81322298039694e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.94599040145739e-05!GO:0032561;guanyl ribonucleotide binding;2.01086707358906e-05!GO:0019001;guanyl nucleotide binding;2.01086707358906e-05!GO:0045892;negative regulation of transcription, DNA-dependent;2.27362948977756e-05!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.3775286686869e-05!GO:0006402;mRNA catabolic process;2.61673207075086e-05!GO:0046034;ATP metabolic process;2.70420058631901e-05!GO:0009199;ribonucleoside triphosphate metabolic process;2.75956313772887e-05!GO:0006468;protein amino acid phosphorylation;2.84148745526435e-05!GO:0009893;positive regulation of metabolic process;3.03792794200163e-05!GO:0051338;regulation of transferase activity;3.05332651039634e-05!GO:0065002;intracellular protein transport across a membrane;3.12288482386756e-05!GO:0005057;receptor signaling protein activity;3.17976510534465e-05!GO:0001775;cell activation;3.57176357799265e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.65068137512462e-05!GO:0009144;purine nucleoside triphosphate metabolic process;3.65068137512462e-05!GO:0051188;cofactor biosynthetic process;3.7403071396857e-05!GO:0065004;protein-DNA complex assembly;3.90316247625746e-05!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.02569994559798e-05!GO:0045449;regulation of transcription;4.16783365090761e-05!GO:0005769;early endosome;4.54670217352729e-05!GO:0007050;cell cycle arrest;4.97059017775121e-05!GO:0009607;response to biotic stimulus;5.22637400473069e-05!GO:0001816;cytokine production;5.86010614681276e-05!GO:0006333;chromatin assembly or disassembly;5.86010614681276e-05!GO:0051168;nuclear export;5.90047022379839e-05!GO:0006351;transcription, DNA-dependent;6.50097745690913e-05!GO:0009141;nucleoside triphosphate metabolic process;6.52124499615077e-05!GO:0032774;RNA biosynthetic process;6.63937646214572e-05!GO:0043549;regulation of kinase activity;6.70088156068038e-05!GO:0044431;Golgi apparatus part;6.7505272999724e-05!GO:0030532;small nuclear ribonucleoprotein complex;7.14573000030357e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;7.4455622766354e-05!GO:0009108;coenzyme biosynthetic process;7.72074259704505e-05!GO:0031982;vesicle;7.931648404398e-05!GO:0009060;aerobic respiration;8.3134477889223e-05!GO:0009055;electron carrier activity;8.59675795602641e-05!GO:0030036;actin cytoskeleton organization and biogenesis;9.09112568410427e-05!GO:0008234;cysteine-type peptidase activity;9.29185028036182e-05!GO:0006752;group transfer coenzyme metabolic process;0.000100737737269526!GO:0045941;positive regulation of transcription;0.000107068033754945!GO:0000151;ubiquitin ligase complex;0.000107498543737153!GO:0042254;ribosome biogenesis and assembly;0.000109194634783802!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000116461025283245!GO:0006888;ER to Golgi vesicle-mediated transport;0.000116608805915982!GO:0008654;phospholipid biosynthetic process;0.00012157107729965!GO:0045859;regulation of protein kinase activity;0.000145379978929847!GO:0002520;immune system development;0.000145869858477451!GO:0031902;late endosome membrane;0.000149341239886297!GO:0046822;regulation of nucleocytoplasmic transport;0.000152838114971478!GO:0045259;proton-transporting ATP synthase complex;0.000155029733902705!GO:0005070;SH3/SH2 adaptor activity;0.000161275641201003!GO:0046983;protein dimerization activity;0.000162294433693289!GO:0030099;myeloid cell differentiation;0.00017190661825373!GO:0005839;proteasome core complex (sensu Eukaryota);0.000181713339567393!GO:0006897;endocytosis;0.000182597597811299!GO:0010324;membrane invagination;0.000182597597811299!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.0001921894878736!GO:0005694;chromosome;0.000208985220717816!GO:0002757;immune response-activating signal transduction;0.000210972279021963!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000212144635176738!GO:0015399;primary active transmembrane transporter activity;0.000212144635176738!GO:0009719;response to endogenous stimulus;0.000230976983183077!GO:0003724;RNA helicase activity;0.000237577551368985!GO:0001726;ruffle;0.000264862220554088!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.000279741329371899!GO:0051090;regulation of transcription factor activity;0.000287727950217892!GO:0006613;cotranslational protein targeting to membrane;0.000298081945507705!GO:0005813;centrosome;0.000308573745497973!GO:0051223;regulation of protein transport;0.000334468870775945!GO:0001819;positive regulation of cytokine production;0.00033615731378326!GO:0046519;sphingoid metabolic process;0.000350439048869758!GO:0045893;positive regulation of transcription, DNA-dependent;0.000350439048869758!GO:0043087;regulation of GTPase activity;0.000351963896657687!GO:0005667;transcription factor complex;0.000357061078614116!GO:0031410;cytoplasmic vesicle;0.0003659018771271!GO:0031325;positive regulation of cellular metabolic process;0.000406604003347681!GO:0006643;membrane lipid metabolic process;0.000417288025043963!GO:0000785;chromatin;0.000421139117734135!GO:0045637;regulation of myeloid cell differentiation;0.000429590655058111!GO:0007034;vacuolar transport;0.000452690035149785!GO:0000245;spliceosome assembly;0.000459167477910702!GO:0022415;viral reproductive process;0.00046302091284288!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000466968137486735!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.000505381215583903!GO:0048534;hemopoietic or lymphoid organ development;0.000510942854073433!GO:0005637;nuclear inner membrane;0.000521321051160875!GO:0004298;threonine endopeptidase activity;0.000533205707476161!GO:0005885;Arp2/3 protein complex;0.000535554574744209!GO:0002764;immune response-regulating signal transduction;0.000561352918585429!GO:0043623;cellular protein complex assembly;0.000561522421766503!GO:0042802;identical protein binding;0.000568655647307933!GO:0019904;protein domain specific binding;0.000569662945659402!GO:0007005;mitochondrion organization and biogenesis;0.000585992482133883!GO:0006672;ceramide metabolic process;0.000638095260382993!GO:0003729;mRNA binding;0.00064404633786054!GO:0002521;leukocyte differentiation;0.000648772955762315!GO:0006919;caspase activation;0.000648772955762315!GO:0031988;membrane-bound vesicle;0.000704675707234649!GO:0032940;secretion by cell;0.000705427981280543!GO:0005798;Golgi-associated vesicle;0.000714504276703191!GO:0051427;hormone receptor binding;0.000802949347943167!GO:0004672;protein kinase activity;0.000836805834974778!GO:0006355;regulation of transcription, DNA-dependent;0.000859751491466121!GO:0043492;ATPase activity, coupled to movement of substances;0.000890512202539781!GO:0005099;Ras GTPase activator activity;0.000892984126552559!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.000945268478984677!GO:0045333;cellular respiration;0.000966656692141897!GO:0030029;actin filament-based process;0.000986211045180228!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.0009999640200947!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00100202862036478!GO:0007041;lysosomal transport;0.00102759516172335!GO:0000139;Golgi membrane;0.00104020433235941!GO:0005815;microtubule organizing center;0.00106732126266672!GO:0033157;regulation of intracellular protein transport;0.00108050172596418!GO:0042306;regulation of protein import into nucleus;0.00108050172596418!GO:0005741;mitochondrial outer membrane;0.00109386583128336!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00115021806600254!GO:0001817;regulation of cytokine production;0.00125217561177336!GO:0035257;nuclear hormone receptor binding;0.00126955509274104!GO:0046578;regulation of Ras protein signal transduction;0.00129445653591512!GO:0051251;positive regulation of lymphocyte activation;0.00129610525344045!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00129610525344045!GO:0043280;positive regulation of caspase activity;0.00132495997893383!GO:0043281;regulation of caspase activity;0.0013555486861656!GO:0008270;zinc ion binding;0.00138093608904725!GO:0016363;nuclear matrix;0.00156001925238958!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00161090708973501!GO:0043085;positive regulation of catalytic activity;0.00162880202537276!GO:0006399;tRNA metabolic process;0.0016835416601471!GO:0016023;cytoplasmic membrane-bound vesicle;0.00169625125057995!GO:0006650;glycerophospholipid metabolic process;0.00172477256946509!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00172540261214671!GO:0030658;transport vesicle membrane;0.00173708997330963!GO:0044427;chromosomal part;0.00174165875556344!GO:0000278;mitotic cell cycle;0.00181002293134913!GO:0051056;regulation of small GTPase mediated signal transduction;0.00188410897330082!GO:0008186;RNA-dependent ATPase activity;0.00189395311533461!GO:0005761;mitochondrial ribosome;0.00190804465587452!GO:0000313;organellar ribosome;0.00190804465587452!GO:0045646;regulation of erythrocyte differentiation;0.00196226836181821!GO:0032318;regulation of Ras GTPase activity;0.00196285158471079!GO:0016779;nucleotidyltransferase activity;0.00200192139138109!GO:0006099;tricarboxylic acid cycle;0.00204626628480803!GO:0046356;acetyl-CoA catabolic process;0.00204626628480803!GO:0018193;peptidyl-amino acid modification;0.00224370003131501!GO:0046467;membrane lipid biosynthetic process;0.00225943506271259!GO:0030217;T cell differentiation;0.00225943506271259!GO:0006607;NLS-bearing substrate import into nucleus;0.00232808676094069!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00233151196824256!GO:0006612;protein targeting to membrane;0.00237234250724469!GO:0016072;rRNA metabolic process;0.00240302623946361!GO:0051348;negative regulation of transferase activity;0.00248329422229363!GO:0007040;lysosome organization and biogenesis;0.00249071283285707!GO:0033116;ER-Golgi intermediate compartment membrane;0.00252015934849672!GO:0009117;nucleotide metabolic process;0.00254222177805705!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00255122872332255!GO:0002274;myeloid leukocyte activation;0.00262032527849719!GO:0016791;phosphoric monoester hydrolase activity;0.00268176511526319!GO:0031901;early endosome membrane;0.00270817193529805!GO:0033673;negative regulation of kinase activity;0.00272361142371791!GO:0006469;negative regulation of protein kinase activity;0.00272361142371791!GO:0030258;lipid modification;0.0027879426807999!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00287265617537658!GO:0004812;aminoacyl-tRNA ligase activity;0.00287265617537658!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00287265617537658!GO:0030384;phosphoinositide metabolic process;0.00289909100721556!GO:0042990;regulation of transcription factor import into nucleus;0.00300187762663627!GO:0042991;transcription factor import into nucleus;0.00300187762663627!GO:0006352;transcription initiation;0.00304437178409083!GO:0006364;rRNA processing;0.00305475468280993!GO:0031968;organelle outer membrane;0.00307090942697909!GO:0051789;response to protein stimulus;0.00313462691803806!GO:0006986;response to unfolded protein;0.00313462691803806!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00349273364335638!GO:0006818;hydrogen transport;0.00356279226364612!GO:0030660;Golgi-associated vesicle membrane;0.0037297573639066!GO:0019867;outer membrane;0.00377562456666998!GO:0019901;protein kinase binding;0.00385091873063983!GO:0007259;JAK-STAT cascade;0.0039275180091112!GO:0008287;protein serine/threonine phosphatase complex;0.00420884969386044!GO:0030218;erythrocyte differentiation;0.0043035939491418!GO:0019882;antigen processing and presentation;0.00439606947554663!GO:0015992;proton transport;0.00445653518262813!GO:0007033;vacuole organization and biogenesis;0.00449090487060366!GO:0004004;ATP-dependent RNA helicase activity;0.00451456199495186!GO:0004715;non-membrane spanning protein tyrosine kinase activity;0.00451456199495186!GO:0043038;amino acid activation;0.00467755735647104!GO:0006418;tRNA aminoacylation for protein translation;0.00467755735647104!GO:0043039;tRNA aminoacylation;0.00467755735647104!GO:0017091;AU-rich element binding;0.00473552197674043!GO:0050779;RNA destabilization;0.00473552197674043!GO:0000289;poly(A) tail shortening;0.00473552197674043!GO:0004428;inositol or phosphatidylinositol kinase activity;0.00480499409307333!GO:0051092;activation of NF-kappaB transcription factor;0.00486836740823323!GO:0048471;perinuclear region of cytoplasm;0.00486836740823323!GO:0022890;inorganic cation transmembrane transporter activity;0.00487897074066915!GO:0015631;tubulin binding;0.00488758375279274!GO:0051252;regulation of RNA metabolic process;0.00504699922343284!GO:0004722;protein serine/threonine phosphatase activity;0.00513057063962495!GO:0051059;NF-kappaB binding;0.00514688351375742!GO:0043433;negative regulation of transcription factor activity;0.00521876413046799!GO:0006260;DNA replication;0.00524285752249697!GO:0006084;acetyl-CoA metabolic process;0.00541743728051264!GO:0016251;general RNA polymerase II transcription factor activity;0.00544029746574707!GO:0043021;ribonucleoprotein binding;0.00548884923563803!GO:0002440;production of molecular mediator of immune response;0.00585849481896363!GO:0051345;positive regulation of hydrolase activity;0.00604947520858969!GO:0016311;dephosphorylation;0.00606422650786491!GO:0005048;signal sequence binding;0.00609028686564999!GO:0045746;negative regulation of Notch signaling pathway;0.00611696222047536!GO:0051707;response to other organism;0.00637060522675472!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00638717066502767!GO:0003725;double-stranded RNA binding;0.0064082876442679!GO:0031625;ubiquitin protein ligase binding;0.00641709037336162!GO:0032386;regulation of intracellular transport;0.00645250048096044!GO:0006611;protein export from nucleus;0.00649432173891532!GO:0006891;intra-Golgi vesicle-mediated transport;0.00652151202410393!GO:0051187;cofactor catabolic process;0.0065876518512338!GO:0043488;regulation of mRNA stability;0.0066428005486245!GO:0043487;regulation of RNA stability;0.0066428005486245!GO:0030149;sphingolipid catabolic process;0.00674502113640598!GO:0004185;serine carboxypeptidase activity;0.00674502113640598!GO:0043621;protein self-association;0.00674600022140213!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00676542219871739!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00676542219871739!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00676542219871739!GO:0000118;histone deacetylase complex;0.00686130192947872!GO:0004177;aminopeptidase activity;0.00689158289421072!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00690439218794973!GO:0003690;double-stranded DNA binding;0.00690439218794973!GO:0030118;clathrin coat;0.00698427384645095!GO:0019210;kinase inhibitor activity;0.00699353221745766!GO:0019843;rRNA binding;0.00710154935874006!GO:0045045;secretory pathway;0.00712338231584249!GO:0019783;small conjugating protein-specific protease activity;0.00712338231584249!GO:0042613;MHC class II protein complex;0.0072255097991089!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00722628282798511!GO:0000082;G1/S transition of mitotic cell cycle;0.00725352897160605!GO:0004860;protein kinase inhibitor activity;0.00729268124079759!GO:0044262;cellular carbohydrate metabolic process;0.00745217747626342!GO:0030176;integral to endoplasmic reticulum membrane;0.00752875681103079!GO:0008624;induction of apoptosis by extracellular signals;0.00768248074690089!GO:0050851;antigen receptor-mediated signaling pathway;0.00769300925436759!GO:0051329;interphase of mitotic cell cycle;0.00774000677926167!GO:0046474;glycerophospholipid biosynthetic process;0.00822772699405376!GO:0000209;protein polyubiquitination;0.00826511147874368!GO:0009109;coenzyme catabolic process;0.00827072129389215!GO:0008139;nuclear localization sequence binding;0.00867351853354638!GO:0045792;negative regulation of cell size;0.00867351853354638!GO:0042101;T cell receptor complex;0.0089103275713957!GO:0051325;interphase;0.00904427007018025!GO:0051098;regulation of binding;0.00926333437899894!GO:0004843;ubiquitin-specific protease activity;0.00961675608052082!GO:0008017;microtubule binding;0.00979289634676358!GO:0008637;apoptotic mitochondrial changes;0.00984162484042279!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0100853194002328!GO:0000165;MAPKKK cascade;0.0101736031898003!GO:0004197;cysteine-type endopeptidase activity;0.0104976247128373!GO:0050870;positive regulation of T cell activation;0.0107229043552175!GO:0015630;microtubule cytoskeleton;0.0107366626922728!GO:0006984;ER-nuclear signaling pathway;0.0108520396881273!GO:0046966;thyroid hormone receptor binding;0.0109160727111016!GO:0001772;immunological synapse;0.0109352285850674!GO:0030308;negative regulation of cell growth;0.011034541658786!GO:0019900;kinase binding;0.011146008642146!GO:0002252;immune effector process;0.0112930016706373!GO:0019220;regulation of phosphate metabolic process;0.0113182834277281!GO:0051174;regulation of phosphorus metabolic process;0.0113182834277281!GO:0051091;positive regulation of transcription factor activity;0.0113558485268896!GO:0030098;lymphocyte differentiation;0.0115649981439175!GO:0030041;actin filament polymerization;0.0117117639134342!GO:0030867;rough endoplasmic reticulum membrane;0.0119450889735536!GO:0009165;nucleotide biosynthetic process;0.011977533309289!GO:0048487;beta-tubulin binding;0.0124242638837065!GO:0031497;chromatin assembly;0.0126874702887127!GO:0015923;mannosidase activity;0.0127026371169002!GO:0006665;sphingolipid metabolic process;0.0127882061811212!GO:0045926;negative regulation of growth;0.0127882061811212!GO:0003746;translation elongation factor activity;0.013288313269243!GO:0006644;phospholipid metabolic process;0.0133723312836177!GO:0006414;translational elongation;0.0134493844969154!GO:0045603;positive regulation of endothelial cell differentiation;0.0134606778532988!GO:0050871;positive regulation of B cell activation;0.013571377307699!GO:0006354;RNA elongation;0.0136441832964343!GO:0005484;SNAP receptor activity;0.0138496769574449!GO:0002467;germinal center formation;0.0139102276591458!GO:0045454;cell redox homeostasis;0.0141983007684342!GO:0046489;phosphoinositide biosynthetic process;0.0141983007684342!GO:0003702;RNA polymerase II transcription factor activity;0.0142968570111629!GO:0004221;ubiquitin thiolesterase activity;0.0144106987878037!GO:0008383;manganese superoxide dismutase activity;0.0145352087714694!GO:0001315;age-dependent response to reactive oxygen species;0.0145352087714694!GO:0019079;viral genome replication;0.0147505893282241!GO:0006914;autophagy;0.0149410731155749!GO:0043407;negative regulation of MAP kinase activity;0.015133085672147!GO:0019058;viral infectious cycle;0.0151581063720041!GO:0000287;magnesium ion binding;0.0154564250429046!GO:0033367;protein localization in mast cell secretory granule;0.0154564250429046!GO:0033365;protein localization in organelle;0.0154564250429046!GO:0033371;T cell secretory granule organization and biogenesis;0.0154564250429046!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0154564250429046!GO:0033375;protease localization in T cell secretory granule;0.0154564250429046!GO:0042629;mast cell granule;0.0154564250429046!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0154564250429046!GO:0033364;mast cell secretory granule organization and biogenesis;0.0154564250429046!GO:0033380;granzyme B localization in T cell secretory granule;0.0154564250429046!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0154564250429046!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0154564250429046!GO:0033368;protease localization in mast cell secretory granule;0.0154564250429046!GO:0033366;protein localization in secretory granule;0.0154564250429046!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0154564250429046!GO:0033374;protein localization in T cell secretory granule;0.0154564250429046!GO:0051235;maintenance of localization;0.0159673043151555!GO:0006334;nucleosome assembly;0.0163149255370212!GO:0016584;nucleosome positioning;0.0169832850412175!GO:0005669;transcription factor TFIID complex;0.0170977063678296!GO:0019883;antigen processing and presentation of endogenous antigen;0.0171398263013735!GO:0050900;leukocyte migration;0.0172767644140362!GO:0006954;inflammatory response;0.0173440901298285!GO:0006405;RNA export from nucleus;0.0173845356318233!GO:0001562;response to protozoan;0.0177801465219331!GO:0046914;transition metal ion binding;0.0177864615664732!GO:0030127;COPII vesicle coat;0.0177920063079963!GO:0012507;ER to Golgi transport vesicle membrane;0.0177920063079963!GO:0030027;lamellipodium;0.0178766444566772!GO:0008286;insulin receptor signaling pathway;0.0183661765239719!GO:0050865;regulation of cell activation;0.0189373950225649!GO:0017166;vinculin binding;0.0189717410736562!GO:0030518;steroid hormone receptor signaling pathway;0.019015542853051!GO:0004702;receptor signaling protein serine/threonine kinase activity;0.0192681490724853!GO:0045058;T cell selection;0.0193472070595988!GO:0051051;negative regulation of transport;0.0197490584387044!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0204675696768663!GO:0007266;Rho protein signal transduction;0.0205526219435766!GO:0033549;MAP kinase phosphatase activity;0.0209519048464935!GO:0017017;MAP kinase tyrosine/serine/threonine phosphatase activity;0.0209519048464935!GO:0031072;heat shock protein binding;0.021350720544359!GO:0030134;ER to Golgi transport vesicle;0.0216454546292359!GO:0006595;polyamine metabolic process;0.0226072114861019!GO:0006516;glycoprotein catabolic process;0.023460893219975!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0234854211414958!GO:0002819;regulation of adaptive immune response;0.0234854211414958!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0236583641283362!GO:0046854;phosphoinositide phosphorylation;0.0238847181013044!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0244744257662832!GO:0006376;mRNA splice site selection;0.0246759725911233!GO:0043022;ribosome binding;0.0246759725911233!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0246759725911233!GO:0048500;signal recognition particle;0.0248366219844833!GO:0030125;clathrin vesicle coat;0.0248972457699489!GO:0030665;clathrin coated vesicle membrane;0.0248972457699489!GO:0001516;prostaglandin biosynthetic process;0.0250255263553725!GO:0046457;prostanoid biosynthetic process;0.0250255263553725!GO:0030968;unfolded protein response;0.0250895558294028!GO:0051249;regulation of lymphocyte activation;0.0263145290534809!GO:0005085;guanyl-nucleotide exchange factor activity;0.0263145290534809!GO:0008333;endosome to lysosome transport;0.0263655834740504!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0266536014842007!GO:0005684;U2-dependent spliceosome;0.0269623365647351!GO:0006661;phosphatidylinositol biosynthetic process;0.0269623365647351!GO:0030119;AP-type membrane coat adaptor complex;0.0273504909893499!GO:0007162;negative regulation of cell adhesion;0.0276622373466691!GO:0005791;rough endoplasmic reticulum;0.0279161888088265!GO:0032763;regulation of mast cell cytokine production;0.0279161888088265!GO:0032762;mast cell cytokine production;0.0279161888088265!GO:0051049;regulation of transport;0.0282825103312444!GO:0008610;lipid biosynthetic process;0.0285415138730491!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.029103770954598!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.029103770954598!GO:0009126;purine nucleoside monophosphate metabolic process;0.029103770954598!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.029103770954598!GO:0005905;coated pit;0.0291341697855171!GO:0005869;dynactin complex;0.0297313571455628!GO:0045639;positive regulation of myeloid cell differentiation;0.030642083832845!GO:0048872;homeostasis of number of cells;0.0312321884544367!GO:0042108;positive regulation of cytokine biosynthetic process;0.0320333604879148!GO:0003711;transcription elongation regulator activity;0.0321889615552265!GO:0048002;antigen processing and presentation of peptide antigen;0.0324869567558111!GO:0030133;transport vesicle;0.0326385739168402!GO:0042287;MHC protein binding;0.0327026750709153!GO:0046834;lipid phosphorylation;0.0333801108909716!GO:0046426;negative regulation of JAK-STAT cascade;0.0333849632845602!GO:0002218;activation of innate immune response;0.0334912793134708!GO:0002758;innate immune response-activating signal transduction;0.0334912793134708!GO:0050811;GABA receptor binding;0.0336331819282543!GO:0008629;induction of apoptosis by intracellular signals;0.0336331819282543!GO:0031098;stress-activated protein kinase signaling pathway;0.0344577319426529!GO:0006338;chromatin remodeling;0.0345026358045244!GO:0004721;phosphoprotein phosphatase activity;0.0346847221817526!GO:0042611;MHC protein complex;0.0355626835133088!GO:0030521;androgen receptor signaling pathway;0.0358949458821983!GO:0045113;regulation of integrin biosynthetic process;0.0370628331663897!GO:0045112;integrin biosynthetic process;0.0370628331663897!GO:0019377;glycolipid catabolic process;0.0370628331663897!GO:0006383;transcription from RNA polymerase III promoter;0.0372673884597271!GO:0030131;clathrin adaptor complex;0.0376134097753186!GO:0002224;toll-like receptor signaling pathway;0.0376134097753186!GO:0002221;pattern recognition receptor signaling pathway;0.0376134097753186!GO:0030674;protein binding, bridging;0.0376157942918704!GO:0042832;defense response to protozoan;0.0379157631514362!GO:0032760;positive regulation of tumor necrosis factor production;0.0379157631514362!GO:0006310;DNA recombination;0.0379157631514362!GO:0007006;mitochondrial membrane organization and biogenesis;0.0379157631514362!GO:0045936;negative regulation of phosphate metabolic process;0.0386333619255967!GO:0050863;regulation of T cell activation;0.0386333619255967!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.038797095215076!GO:0045047;protein targeting to ER;0.038797095215076!GO:0040029;regulation of gene expression, epigenetic;0.0387985013568837!GO:0008154;actin polymerization and/or depolymerization;0.0390772752875481!GO:0016788;hydrolase activity, acting on ester bonds;0.0391464695431623!GO:0006261;DNA-dependent DNA replication;0.0391576680784369!GO:0000188;inactivation of MAPK activity;0.0391718485990044!GO:0006470;protein amino acid dephosphorylation;0.0394406719291035!GO:0006458;'de novo' protein folding;0.0396614061089438!GO:0051084;'de novo' posttranslational protein folding;0.0396614061089438!GO:0004563;beta-N-acetylhexosaminidase activity;0.0397666211268057!GO:0045064;T-helper 2 cell differentiation;0.0397666211268057!GO:0000060;protein import into nucleus, translocation;0.0397666211268057!GO:0042092;T-helper 2 type immune response;0.0404735194447003!GO:0008276;protein methyltransferase activity;0.0408728766844041!GO:0051020;GTPase binding;0.0409357374125052!GO:0002718;regulation of cytokine production during immune response;0.0413903238621094!GO:0002367;cytokine production during immune response;0.0413903238621094!GO:0002700;regulation of production of molecular mediator of immune response;0.0413903238621094!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0413903238621094!GO:0006013;mannose metabolic process;0.0417812435140065!GO:0042992;negative regulation of transcription factor import into nucleus;0.0421614305877899!GO:0042308;negative regulation of protein import into nucleus;0.0421614305877899!GO:0016605;PML body;0.0421614305877899!GO:0031301;integral to organelle membrane;0.0428849688232127!GO:0046466;membrane lipid catabolic process;0.0429781761739476!GO:0002250;adaptive immune response;0.0433417950760809!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0433417950760809!GO:0019371;cyclooxygenase pathway;0.0433417950760809!GO:0046839;phospholipid dephosphorylation;0.0441312843203276!GO:0006509;membrane protein ectodomain proteolysis;0.0441847510128833!GO:0033619;membrane protein proteolysis;0.0441847510128833!GO:0044255;cellular lipid metabolic process;0.0446537957160954!GO:0000339;RNA cap binding;0.0451844166594159!GO:0045089;positive regulation of innate immune response;0.0455749465163699!GO:0045088;regulation of innate immune response;0.0455749465163699!GO:0042113;B cell activation;0.0463084683992627!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0464482486020255!GO:0000303;response to superoxide;0.0464620692597391!GO:0030433;ER-associated protein catabolic process;0.0466725825899498!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0466725825899498!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0468745646973335!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0468745646973335!GO:0001836;release of cytochrome c from mitochondria;0.0468745646973335!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0470119992481171!GO:0035035;histone acetyltransferase binding;0.0470119992481171!GO:0045185;maintenance of protein localization;0.0473271836625934!GO:0051347;positive regulation of transferase activity;0.0474053120250261!GO:0005788;endoplasmic reticulum lumen;0.0478722750849281!GO:0043300;regulation of leukocyte degranulation;0.0483057986636024!GO:0016566;specific transcriptional repressor activity;0.048546512637274!GO:0002237;response to molecule of bacterial origin;0.0486695827736797!GO:0042326;negative regulation of phosphorylation;0.0491142561476496!GO:0009299;mRNA transcription;0.0493732326862946!GO:0002443;leukocyte mediated immunity;0.0494156029830324!GO:0016279;protein-lysine N-methyltransferase activity;0.0494156029830324!GO:0018024;histone-lysine N-methyltransferase activity;0.0494156029830324!GO:0016278;lysine N-methyltransferase activity;0.0494156029830324!GO:0006968;cellular defense response;0.0494361260079373!GO:0008312;7S RNA binding;0.0498737460012547!GO:0030503;regulation of cell redox homeostasis;0.049874188048791
|sample_id=11305
|sample_id=11305
|sample_note=
|sample_note=
Line 76: Line 105:
|sample_tissue=blood
|sample_tissue=blood
|top_motifs=NFKB1_REL_RELA:5.08230965593;PAX2:4.41836472384;BACH2:4.32448999431;FOS_FOS{B,L1}_JUN{B,D}:4.21059998901;NFE2:4.1175926303;FOSL2:4.02496492467;PAX3,7:3.96371083425;RUNX1..3:3.54740982429;NFIL3:3.52722077513;SPIB:3.4791065025;SPI1:3.4743005652;CREB1:3.46074257127;CEBPA,B_DDIT3:3.24569162443;ATF5_CREB3:3.19848594365;ETS1,2:3.18027418374;ATF4:3.10469233613;HLF:2.96317441423;RXRA_VDR{dimer}:2.94756982991;TGIF1:2.66078904453;HMGA1,2:2.56870515411;NANOG{mouse}:2.42008304276;NFATC1..3:2.39288527589;DMAP1_NCOR{1,2}_SMARC:2.36722411987;NFE2L2:2.34449376982;IRF1,2:2.33345403137;FOXN1:2.29228965811;MAFB:2.20530963641;BPTF:2.1988312344;NFE2L1:2.1693149549;FOXP3:2.06441199174;JUN:2.01545368279;FOXO1,3,4:1.97186414197;PITX1..3:1.94381516015;PAX8:1.92707973226;STAT2,4,6:1.88402584618;RFX2..5_RFXANK_RFXAP:1.84386237415;EP300:1.53749603885;ELF1,2,4:1.47703659239;IRF7:1.47691790397;SREBF1,2:1.47200526651;HIF1A:1.41758841898;FOX{D1,D2}:1.32886475019;FOXP1:1.30893613073;HMX1:1.30468838881;ATF2:1.15325570418;RORA:0.974713797258;RBPJ:0.902864513382;ATF6:0.835717020959;PDX1:0.648489413143;T:0.552910050878;HOX{A5,B5}:0.478892387888;HBP1_HMGB_SSRP1_UBTF:0.40331126534;HSF1,2:0.38547436618;NKX2-1,4:0.368431361393;SMAD1..7,9:0.357956955679;EGR1..3:0.35341250674;GATA4:0.333865043048;PPARG:0.270494508224;ZBTB16:0.202659964923;GLI1..3:0.0982624095947;RXR{A,B,G}:0.0823156280762;FOXL1:0.0755093948109;XBP1:-0.000291299714892;ALX4:-0.00130590285284;BREu{core}:-0.0443068387715;TFCP2:-0.0593068828367;IKZF2:-0.111772896466;MEF2{A,B,C,D}:-0.189045453915;FOX{F1,F2,J1}:-0.190513732229;SOX2:-0.197018847529;HOXA9_MEIS1:-0.213075481998;IKZF1:-0.219100282744;NANOG:-0.224545824715;ESR1:-0.271500522766;TFAP2{A,C}:-0.31106134335;POU2F1..3:-0.31890956582;MYB:-0.374937297488;TFDP1:-0.39418224385;TBX4,5:-0.410709178096;TLX2:-0.418007238004;FOXD3:-0.491098318429;ZNF384:-0.503747260213;MTE{core}:-0.520366442969;SRF:-0.523326430461;NKX6-1,2:-0.536443316948;NR1H4:-0.538546176373;RREB1:-0.540729414507;POU5F1:-0.581891072662;AHR_ARNT_ARNT2:-0.590577851567;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.641900011528;MYFfamily:-0.657501712245;ESRRA:-0.678341720931;TFAP2B:-0.685013603042;NKX3-1:-0.687225602219;ZFP161:-0.68955121157;TOPORS:-0.749493043806;EN1,2:-0.763415796958;FOXM1:-0.785715086156;MED-1{core}:-0.788913133253;MZF1:-0.820792327228;RFX1:-0.857847094305;ZNF238:-0.921976143801;TFAP4:-0.930342104912;CDX1,2,4:-0.960131413639;PRDM1:-0.982997092915;PATZ1:-0.998380007124;HNF4A_NR2F1,2:-1.0007047165;HES1:-1.01056376144;SP1:-1.01969919133;OCT4_SOX2{dimer}:-1.02719679905;GCM1,2:-1.05877315501;NHLH1,2:-1.07870733112;STAT1,3:-1.14501575957;VSX1,2:-1.17814918019;TEF:-1.17985289639;REST:-1.20902180052;NR6A1:-1.21986741576;STAT5{A,B}:-1.22142247284;E2F1..5:-1.26922134838;MTF1:-1.27818612441;GATA6:-1.29220912468;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.36111563106;HIC1:-1.38759642307;HNF1A:-1.4275302304;DBP:-1.45524875683;TAL1_TCF{3,4,12}:-1.46503108619;NR5A1,2:-1.4811854755;TBP:-1.48618832639;PAX6:-1.49777804591;FOXA2:-1.50934686066;CUX2:-1.51618558936;XCPE1{core}:-1.57071866192;PAX4:-1.59613947381;ZEB1:-1.59786219366;GZF1:-1.60385772831;MAZ:-1.61799977164;EBF1:-1.62985591695;MYOD1:-1.65781457092;TP53:-1.67558513848;SOX{8,9,10}:-1.69632706858;PRRX1,2:-1.71042244183;PAX5:-1.72880363428;SOX5:-1.77075400433;CRX:-1.83135664094;NR3C1:-1.86363844077;TEAD1:-1.88904837761;GTF2I:-1.9004463929;SPZ1:-1.91703769619;PAX1,9:-1.92006667353;NFY{A,B,C}:-1.94677196172;ZNF423:-1.96703939709;NKX2-3_NKX2-5:-1.97908565521;GTF2A1,2:-1.98827515594;ZNF148:-2.0144936474;SNAI1..3:-2.03016909559;ADNP_IRX_SIX_ZHX:-2.08731527243;NKX2-2,8:-2.09114181371;FOX{I1,J2}:-2.12634714699;LEF1_TCF7_TCF7L1,2:-2.12675761733;TLX1..3_NFIC{dimer}:-2.1269354876;NFIX:-2.14718596311;ZBTB6:-2.15872224595;AIRE:-2.16325862978;ZIC1..3:-2.16408956335;POU3F1..4:-2.20988204258;bHLH_family:-2.24783700091;POU6F1:-2.26454873063;ELK1,4_GABP{A,B1}:-2.28251089885;HOX{A4,D4}:-2.32280396702;HOX{A6,A7,B6,B7}:-2.37257364268;ALX1:-2.3980663675;MYBL2:-2.45362089229;NRF1:-2.48180476126;PBX1:-2.49357880482;CDC5L:-2.4948067781;LMO2:-2.59217185798;UFEwm:-2.66037360557;FOXQ1:-2.69331047462;ONECUT1,2:-2.71178550209;SOX17:-2.71493584647;KLF4:-2.76535775928;ARID5B:-2.83094260926;GFI1:-2.90158672203;GFI1B:-3.01520443551;LHX3,4:-3.04930490924;AR:-3.11532178074;EVI1:-3.15947788815;NKX3-2:-3.16922513239;ZNF143:-3.37854469335;YY1:-3.4660338723;HAND1,2:-3.80661182104;POU1F1:-3.90774299165
|top_motifs=NFKB1_REL_RELA:5.08230965593;PAX2:4.41836472384;BACH2:4.32448999431;FOS_FOS{B,L1}_JUN{B,D}:4.21059998901;NFE2:4.1175926303;FOSL2:4.02496492467;PAX3,7:3.96371083425;RUNX1..3:3.54740982429;NFIL3:3.52722077513;SPIB:3.4791065025;SPI1:3.4743005652;CREB1:3.46074257127;CEBPA,B_DDIT3:3.24569162443;ATF5_CREB3:3.19848594365;ETS1,2:3.18027418374;ATF4:3.10469233613;HLF:2.96317441423;RXRA_VDR{dimer}:2.94756982991;TGIF1:2.66078904453;HMGA1,2:2.56870515411;NANOG{mouse}:2.42008304276;NFATC1..3:2.39288527589;DMAP1_NCOR{1,2}_SMARC:2.36722411987;NFE2L2:2.34449376982;IRF1,2:2.33345403137;FOXN1:2.29228965811;MAFB:2.20530963641;BPTF:2.1988312344;NFE2L1:2.1693149549;FOXP3:2.06441199174;JUN:2.01545368279;FOXO1,3,4:1.97186414197;PITX1..3:1.94381516015;PAX8:1.92707973226;STAT2,4,6:1.88402584618;RFX2..5_RFXANK_RFXAP:1.84386237415;EP300:1.53749603885;ELF1,2,4:1.47703659239;IRF7:1.47691790397;SREBF1,2:1.47200526651;HIF1A:1.41758841898;FOX{D1,D2}:1.32886475019;FOXP1:1.30893613073;HMX1:1.30468838881;ATF2:1.15325570418;RORA:0.974713797258;RBPJ:0.902864513382;ATF6:0.835717020959;PDX1:0.648489413143;T:0.552910050878;HOX{A5,B5}:0.478892387888;HBP1_HMGB_SSRP1_UBTF:0.40331126534;HSF1,2:0.38547436618;NKX2-1,4:0.368431361393;SMAD1..7,9:0.357956955679;EGR1..3:0.35341250674;GATA4:0.333865043048;PPARG:0.270494508224;ZBTB16:0.202659964923;GLI1..3:0.0982624095947;RXR{A,B,G}:0.0823156280762;FOXL1:0.0755093948109;XBP1:-0.000291299714892;ALX4:-0.00130590285284;BREu{core}:-0.0443068387715;TFCP2:-0.0593068828367;IKZF2:-0.111772896466;MEF2{A,B,C,D}:-0.189045453915;FOX{F1,F2,J1}:-0.190513732229;SOX2:-0.197018847529;HOXA9_MEIS1:-0.213075481998;IKZF1:-0.219100282744;NANOG:-0.224545824715;ESR1:-0.271500522766;TFAP2{A,C}:-0.31106134335;POU2F1..3:-0.31890956582;MYB:-0.374937297488;TFDP1:-0.39418224385;TBX4,5:-0.410709178096;TLX2:-0.418007238004;FOXD3:-0.491098318429;ZNF384:-0.503747260213;MTE{core}:-0.520366442969;SRF:-0.523326430461;NKX6-1,2:-0.536443316948;NR1H4:-0.538546176373;RREB1:-0.540729414507;POU5F1:-0.581891072662;AHR_ARNT_ARNT2:-0.590577851567;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.641900011528;MYFfamily:-0.657501712245;ESRRA:-0.678341720931;TFAP2B:-0.685013603042;NKX3-1:-0.687225602219;ZFP161:-0.68955121157;TOPORS:-0.749493043806;EN1,2:-0.763415796958;FOXM1:-0.785715086156;MED-1{core}:-0.788913133253;MZF1:-0.820792327228;RFX1:-0.857847094305;ZNF238:-0.921976143801;TFAP4:-0.930342104912;CDX1,2,4:-0.960131413639;PRDM1:-0.982997092915;PATZ1:-0.998380007124;HNF4A_NR2F1,2:-1.0007047165;HES1:-1.01056376144;SP1:-1.01969919133;OCT4_SOX2{dimer}:-1.02719679905;GCM1,2:-1.05877315501;NHLH1,2:-1.07870733112;STAT1,3:-1.14501575957;VSX1,2:-1.17814918019;TEF:-1.17985289639;REST:-1.20902180052;NR6A1:-1.21986741576;STAT5{A,B}:-1.22142247284;E2F1..5:-1.26922134838;MTF1:-1.27818612441;GATA6:-1.29220912468;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.36111563106;HIC1:-1.38759642307;HNF1A:-1.4275302304;DBP:-1.45524875683;TAL1_TCF{3,4,12}:-1.46503108619;NR5A1,2:-1.4811854755;TBP:-1.48618832639;PAX6:-1.49777804591;FOXA2:-1.50934686066;CUX2:-1.51618558936;XCPE1{core}:-1.57071866192;PAX4:-1.59613947381;ZEB1:-1.59786219366;GZF1:-1.60385772831;MAZ:-1.61799977164;EBF1:-1.62985591695;MYOD1:-1.65781457092;TP53:-1.67558513848;SOX{8,9,10}:-1.69632706858;PRRX1,2:-1.71042244183;PAX5:-1.72880363428;SOX5:-1.77075400433;CRX:-1.83135664094;NR3C1:-1.86363844077;TEAD1:-1.88904837761;GTF2I:-1.9004463929;SPZ1:-1.91703769619;PAX1,9:-1.92006667353;NFY{A,B,C}:-1.94677196172;ZNF423:-1.96703939709;NKX2-3_NKX2-5:-1.97908565521;GTF2A1,2:-1.98827515594;ZNF148:-2.0144936474;SNAI1..3:-2.03016909559;ADNP_IRX_SIX_ZHX:-2.08731527243;NKX2-2,8:-2.09114181371;FOX{I1,J2}:-2.12634714699;LEF1_TCF7_TCF7L1,2:-2.12675761733;TLX1..3_NFIC{dimer}:-2.1269354876;NFIX:-2.14718596311;ZBTB6:-2.15872224595;AIRE:-2.16325862978;ZIC1..3:-2.16408956335;POU3F1..4:-2.20988204258;bHLH_family:-2.24783700091;POU6F1:-2.26454873063;ELK1,4_GABP{A,B1}:-2.28251089885;HOX{A4,D4}:-2.32280396702;HOX{A6,A7,B6,B7}:-2.37257364268;ALX1:-2.3980663675;MYBL2:-2.45362089229;NRF1:-2.48180476126;PBX1:-2.49357880482;CDC5L:-2.4948067781;LMO2:-2.59217185798;UFEwm:-2.66037360557;FOXQ1:-2.69331047462;ONECUT1,2:-2.71178550209;SOX17:-2.71493584647;KLF4:-2.76535775928;ARID5B:-2.83094260926;GFI1:-2.90158672203;GFI1B:-3.01520443551;LHX3,4:-3.04930490924;AR:-3.11532178074;EVI1:-3.15947788815;NKX3-2:-3.16922513239;ZNF143:-3.37854469335;YY1:-3.4660338723;HAND1,2:-3.80661182104;POU1F1:-3.90774299165
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11305-117B9;search_select_hide=table117:FF:11305-117B9
}}
}}

Latest revision as of 16:31, 3 June 2020

Name:CD14+ Monocytes, donor2
Species:Human (Homo sapiens)
Library ID:CNhs11954
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stage57 years old adult
sexmale
age57
cell typemonocyte
cell lineNA
company3HBiomedical
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberMon726
catalog number3H100-30-10
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005394
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11954 CAGE DRX008127 DRR008999
Accession ID Hg19

Library idBAMCTSS
CNhs11954 DRZ000424 DRZ001809
Accession ID Hg38

Library idBAMCTSS
CNhs11954 DRZ011774 DRZ013159
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005394
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10008.CTTGTA sRNA-Seq DRX037117 DRR041483
Accession ID Hg19

Library idBAMCTSS
SRhi10008.CTTGTA DRZ007125


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0.506
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0.0794
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.42
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.393
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.557
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.545
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.343
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.416
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.441
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.602
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.792
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0.448
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.652
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.563
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0.0794
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.205
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.195
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.448
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.955
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0.557
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0975
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.946
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190.381
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.149
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.0794
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140.205
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0.416
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.0794
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.544
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0.146
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.929
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.863
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.802
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.807
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.381
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.146
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast1.001
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.749
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.589
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.764
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340.764
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.735
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.205
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.395
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.581
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0.0766
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0.463
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.644
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature1.018
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0.279
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0.0794
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.0262
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.614
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340.343
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340.532
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0.227
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0.256
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11954

Jaspar motifP-value
MA0002.22.39706e-9
MA0003.10.679
MA0004.10.686
MA0006.10.755
MA0007.10.666
MA0009.10.085
MA0014.10.696
MA0017.10.512
MA0018.20.00772
MA0019.10.302
MA0024.10.00562
MA0025.13.54925e-4
MA0027.10.729
MA0028.10.0269
MA0029.10.219
MA0030.10.676
MA0031.10.661
MA0035.20.203
MA0038.10.218
MA0039.20.42
MA0040.10.607
MA0041.10.416
MA0042.10.595
MA0043.11.56641e-10
MA0046.10.00516
MA0047.20.72
MA0048.10.551
MA0050.12.58033e-7
MA0051.10.00211
MA0052.10.00682
MA0055.10.766
MA0057.10.208
MA0058.10.573
MA0059.10.673
MA0060.11.3738e-9
MA0061.11.41317e-30
MA0062.20.274
MA0065.20.111
MA0066.10.0821
MA0067.14.58986e-6
MA0068.10.362
MA0069.10.975
MA0070.10.0314
MA0071.10.34
MA0072.10.583
MA0073.10.39
MA0074.10.106
MA0076.10.0714
MA0077.10.209
MA0078.10.746
MA0079.20.394
MA0080.23.06951e-13
MA0081.12.47565e-4
MA0083.10.401
MA0084.10.951
MA0087.10.815
MA0088.10.18
MA0090.10.149
MA0091.10.602
MA0092.10.484
MA0093.10.843
MA0099.25.20307e-45
MA0100.10.553
MA0101.13.96281e-31
MA0102.22.44463e-11
MA0103.10.0431
MA0104.20.589
MA0105.11.95546e-27
MA0106.10.401
MA0107.11.05229e-36
MA0108.20.0166
MA0111.10.57
MA0112.20.00873
MA0113.10.595
MA0114.10.81
MA0115.10.259
MA0116.10.00369
MA0117.10.0155
MA0119.10.559
MA0122.10.729
MA0124.10.756
MA0125.10.0695
MA0131.10.557
MA0135.10.604
MA0136.12.99617e-14
MA0137.20.874
MA0138.20.0202
MA0139.10.312
MA0140.10.076
MA0141.10.281
MA0142.10.669
MA0143.10.568
MA0144.10.328
MA0145.10.855
MA0146.10.225
MA0147.10.738
MA0148.10.941
MA0149.10.553
MA0150.14.22643e-18
MA0152.10.216
MA0153.10.00122
MA0154.13.8029e-4
MA0155.10.945
MA0156.12.05425e-9
MA0157.10.457
MA0159.10.121
MA0160.10.0956
MA0162.10.785
MA0163.12.47297e-5
MA0164.10.477
MA0258.10.0496
MA0259.10.643



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11954

Novel motifP-value
10.339
100.0132
1000.694
1010.992
1020.952
1030.677
1040.489
1050.111
1065.49669e-4
1070.32
1080.621
1090.435
110.417
1100.425
1110.0661
1120.579
1130.161
1140.125
1150.172
1160.691
1170.0623
1180.167
1190.472
120.234
1200.292
1210.633
1220.698
1230.00612
1240.751
1250.341
1260.204
1270.775
1280.0775
1290.955
130.166
1300.181
1310.966
1320.0527
1330.498
1340.808
1350.613
1360.932
1370.0117
1380.278
1390.0625
140.33
1400.255
1410.398
1420.248
1430.0319
1440.624
1450.609
1460.738
1470.47
1480.0464
1490.796
150.185
1500.581
1510.192
1520.243
1530.744
1540.413
1550.467
1560.574
1570.467
1580.0173
1590.486
160.787
1600.738
1610.549
1620.0987
1630.189
1640.0586
1650.29
1660.594
1670.225
1680.135
1690.0527
170.346
180.233
190.827
20.35
200.259
210.869
220.424
230.0509
240.758
250.357
260.176
270.521
280.41
290.269
30.259
300.228
310.877
320.12
330.335
340.705
350.134
360.0999
370.162
380.484
390.8
40.864
400.24
410.0057
420.456
430.0282
440.448
450.99
460.352
470.899
480.821
490.0899
50.251
500.9
510.475
520.402
530.201
540.534
550.933
560.918
570.832
580.204
590.514
60.936
600.0629
610.444
620.13
630.717
640.607
650.305
660.0459
670.629
680.214
690.205
70.262
700.0728
710.0543
720.252
730.209
740.0439
750.211
760.0681
770.998
780.256
790.619
80.955
800.122
810.406
820.255
830.284
840.0385
850.0558
860.0441
870.864
880.871
890.917
90.409
900.264
910.303
920.362
930.727
940.0853
950.262
960.461
970.757
980.135
990.00562



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11954


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0002393 (intermediate monocyte)
0002397 (CD14-positive, CD16-positive monocyte)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000024 (human CD14-positive monocyte sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)

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