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{{f5samples
{{f5samples
|id=FF:10388-105I1
|DRA_sample_Accession=macaque_CAGE@SAMD00066884
|name=locus coeruleus, adult, donor8633
|accession_numbers=macaque_CAGE;DRX071011;DRR077167;DRZ007690;DRZ007705
|sample_id=10388
|ancestors_in_anatomy_facet=
|rna_tube_id=105I1
|rna_box=105
|rna_position=I1
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Macaque (Macaca mulatta)
|sample_strain=
|sample_dev_stage=
|sample_tissue=locus coeruleus
|sample_donor(cell lot)=donor:8633
|sample_sex=female
|sample_age=23
|sample_ethnicity=
|rna_rin=7.4
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=Peter Heutink
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=
|rna_concentration=0.4
|sample_note=
|profile_hcage=CNhs14172,LSID1177,release017,COMPLETED
|profile_cagescan=
|profile_srnaseq=
|profile_rnaseq=
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|comment=
|created_by=
|creation_date=
|def=
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
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|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|comment=
|created_by=
|creation_date=
|def=
|has_quality=
|has_quality=
|id=FF:10388-105I1
|is_a=
|is_a=
|library_id=CNhs14172
|name=locus coeruleus, adult, donor8633
|namespace=
|namespace=
|part_of=
|part_of=
|profile_cagescan=
|profile_hcage=CNhs14172,LSID1177,release017,COMPLETED
|profile_rnaseq=
|profile_srnaseq=
|rna_box=105
|rna_catalog_number=
|rna_concentration=0.4
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=
|rna_od260/280=
|rna_position=I1
|rna_rin=7.4
|rna_sample_type=total RNA
|rna_tube_id=105I1
|rna_weight_ug=
|sample_age=23
|sample_category=tissues
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=Peter Heutink
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=donor:8633
|sample_ethnicity=
|sample_experimental_condition=
|sample_id=10388
|sample_note=
|sample_sex=female
|sample_species=Rhesus macaque
|sample_strain=
|sample_tissue=locus coeruleus
|top_motifs=
|zenbu_config=http://fantom.gsc.riken.jp/zenbu/gLyphs/#config=Rqah2bi7NNhsVSMs_ZhetB
}}
}}

Latest revision as of 11:26, 18 May 2017


Name:locus coeruleus, adult, donor8633
Species:Rhesus macaque
Library ID:CNhs14172
Sample type:tissues
Additional information
Sample information
strainNA
tissuelocus coeruleus
dev stageNA
sexfemale
age23
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyNA
collaborationPeter Heutink
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
macaque_CAGE  SAMD00066884
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs14172 macaque_CAGE DRX071011 DRR077167
Accession ID

Library idBAMCTSS
CNhs14172 DRZ007690 DRZ007705



FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

FF: FANTOM5
NA

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA