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FFCP PHASE1:Mm9::chrX:9793811..9793891,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:9793811..9793891,-
|DHSsupport=NA
|short_description=p1@Rpgr
|DPIdataset=NA
|description=CAGE_peak_1_at_Rpgr_5end
|association_with_transcript=0bp_to_ENSMUST00000115531,ENSMUST00000115536,ENSMUST00000124744,ENSMUST00000155734_5end
|EntrezGene=19893
|EntrezGene=19893
|HGNC=
|HGNC=
|MCL_coexpression_id=782
|TSSclassifier=NA
|UniProt=E9PUS5,Q9R0X5
|UniProt=E9PUS5,Q9R0X5
|association_with_transcript=0bp_to_ENSMUST00000115531,ENSMUST00000115536,ENSMUST00000124744,ENSMUST00000155734_5end
|cluster_id=chrX:9793811..9793891,-
|description=CAGE_peak_1_at_Rpgr_5end
|id=chrX:9793811..9793891,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.85e-20,49;UBERON:0002346,9.19e-19,64;UBERON:0003075,9.19e-19,64;UBERON:0007284,9.19e-19,64;UBERON:0010371,1.49e-16,73;UBERON:0001049,4.27e-15,52;UBERON:0005068,4.27e-15,52;UBERON:0006241,4.27e-15,52;UBERON:0007135,4.27e-15,52;UBERON:0000073,4.35e-15,54;UBERON:0000955,4.95e-15,47;UBERON:0006238,4.95e-15,47;UBERON:0003080,7.20e-15,40;UBERON:0010314,8.31e-15,92;UBERON:0002616,2.13e-14,46;UBERON:0002780,3.04e-14,39;UBERON:0001890,3.04e-14,39;UBERON:0006240,3.04e-14,39;UBERON:0004121,8.61e-13,95;UBERON:0000924,8.61e-13,95;UBERON:0006601,8.61e-13,95;UBERON:0001017,3.56e-12,73;UBERON:0001016,2.46e-11,75;UBERON:0002020,3.09e-10,34;UBERON:0003528,4.09e-10,29;UBERON:0002791,4.09e-10,29;UBERON:0001893,4.09e-10,29;UBERON:0000956,6.53e-08,21;UBERON:0001869,6.53e-08,21;UBERON:0000203,6.53e-08,21;UBERON:0000922,9.18e-08,320;UBERON:0002619,7.27e-07,17
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8118071374743,9.26567546559747,9.13920585217024,6.58715099736429,8.10989402355735,14.6696548307192,6.51021924219751,13.1074180532139,16.9108884578204,49.253131070095,11.3764003426144,5.47358081283443,8.83314231617514,9.48422007737904,10.5625750443814,11.7221999320946,12.6205221995967,15.2120212989815,15.9526990918073,18.061013177235,15.4264063259366,11.5000299272908,12.0264802050412,15.8952586966934,2.26730383615211,2.66383144048878,3.13998498133165,2.85403847818933,5.21611903886914,3.19060208267009,5.67770035228522,4.93047271881851,4.51414893631827,19.7663144915973,17.4923589872727,20.0513429703789,13.9201077698387,9.59115527678899,17.3740596399631,19.5756525067224,16.6618845192962,19.0319811773366,13.4617681055473,18.9930846079043,13.9658705690361,17.5855613926758,8.99494853152688,7.75568701723535,5.1476182366004,8.44537565646138,8.44743734679466,12.194929964489,11.1186773176071,9.37873409593887,9.80856975207596,8.80230170216895,8.89949618427683,10.9701745705221,6.66811167796303,8.11190281613988,8.10218725947561,11.1263193216893,13.9838974127677,6.51451579532289,10.1161209510822,9.0605752179982,8.57543858130738,10.7284693673477,8.46146078916765,9.87811053512972,11.5750673032651,9.09887562767274,10.661703161497,8.89762635931306,7.09232273104057,7.7753898202241,8.6764631064141,8.8737041051325,5.49583271463481,8.18760629558929,9.66919743217342,6.88637995447836,5.07360263974886,5.10109238364927
|phase1_expression=21.780243206252,2.44282785347553,0.909998478779072,4.23449895829562,2.50447864973174,3.02182689441402,4.20502753071946,1.16210991097419,0.140788722151667,0.234064526321993,0.68487187290202,0.957265907944037,1.54080656938085,1.39872643870396,2.33176833270964,3.03712901084739,2.79824751251259,3.78554598429885,4.2505474417779,1.27316895539409,16.0731818385522,4.66667470644161,8.8807928307238,3.83981814704176,5.50582274561208,1.72269589234506,2.58457197695445,3.01659725760245,4.94060890586572,7.30887376303799,3.54768817048488,0,0,0,6.06588401477677,5.65197794218874,6.12508068787107,3.34825304589526,2.3440060335714,1.0470474879476,1.76469446409304,0.683045484958446,1.94204141212461,1.38486499773135,1.31790010585369,2.38610777810186,0.782391344348039,5.01457859675027,4.17403747195497,6.41618666945135,3.21968769738334,5.75010257459886,4.02678254538567,0,2.35265659399725,1.02903774414379,2.29226751951005,0.515672092277442,12.9482534950143,10.0508286061686,10.775133859605,0.338844532069132,0,0,0,0,1.49800055259202,5.76327457982332,14.101787273953,9.58542162155004,10.3059231062177,4.85606673486466,6.84692476950002,18.0061474845982,15.6228117759725,16.5459381589804,9.91042928994498,10.853423737241,10.1380311949121,13.58428763621,16.4677758484337,18.2319679694866,5.02529398202486,11.2552522006336,10.0846843532695,11.490514833473,10.9626194215309,19.5719418116566,2.95332153999418,5.06329452715463,5.2175607966302,0.860423876981386,0,0.539703191637817,0.649776417447669,1.79210754838934,5.33688796500657,1.36344258062446,0.259786004602869,0.35333957451034,17.8871143116384,1.28326477414318,0,0,3.46385665617943,5.57391704045217,4.04419556011827,4.22480354960522,7.25026074212081,6.97678053604676,7.45986905094384,6.69824052286711,5.76538743140146,7.83757730873637,10.8181610564848,2.38766523526383,4.94389935468748,5.20557684911682,5.30766331169925,3.88240439873782,4.63767188766826,4.84875253135222,5.59175283654366,12.5895742714965,13.6140359428746,5.10914110417183,3.59445373517761,4.79922184794726,5.20987930999565,23.5171303865572,31.5675415944852,37.6963056338593,24.8568777874955,24.2929684463814,14.1295870300501,25.3096370385702,10.3876151127323,5.59831367745419,9.85618757891331,13.8891624885073,20.4289095451445,16.3230494147766,15.1252189036493,21.0986744970001,33.5419940816046,39.3309121274489,29.7971484099938,34.9249550497671,16.383167462896,20.9907748986279,14.9558455539357,8.54863356467542,8.61946472599353,6.61679116392116,6.37924622864625,12.7381930763836,7.02213187313235,5.91900186363845,4.26245249093389,11.8061690345236,12.8989332989603,11.3439098720439,9.2330446878232,8.65762619688577,11.415766353666,9.06882384526591,6.70683503499048,10.1585847859437,9.37991144506839,8.20837320395476,3.81023404865522,4.5321996101853,3.07370161407471,2.41571553768669,19.1363853193356,20.7867317006155,5.28670052774077,2.90895623329899,18.1295012954949,14.8631469990681,10.3093969057675,9.07575860805041,5.33707305227689,6.08722003560189,5.69434873853414,5.59976446061637,6.28338022000674,7.56034593756373,6.23885078781184,3.59527763461689,6.70027954611552,6.17337947088538,9.86273084956025,13.0243304375091,15.7790829942313,16.0884548997798,13.3827216145662,15.3597445559798,10.0546094027569,7.82333784291891,7.69293766422737,6.78684401569903,0.889357881261447,6.34011401721157,6.4864468387357,3.82265591054251,3.04290182082754,3.37648023653384,5.60176873919124,3.16465751195892,5.67473293712624,3.84385978463314,1.43768206527355,2.60498663367952,3.74445207737473,1.76805214562978,1.61457672169721,2.41221760681684,11.2699446001629,11.1799932944586,13.8520229975722,15.1073126339917,12.9079636558676,13.5680068527871,13.3304438896168,11.5128852236101,7.09358148477859,9.96591103419487,6.85655505227195,7.53771247692395,6.56202931090403,6.94315481191256,1.50791283939272,0,0.983528546038072,2.20749397043786,12.8440471990234,13.3621322715112,3.77050374366353,3.28212205365685,5.67914794949262,3.90438744296638,5.17016154558717,4.77937595905104,5.12436950389506,2.83076530788832,6.47697122679831,4.9683495844923,7.11518000303742,26.66966926301,9.79386587937053,5.52003371368491,10.5876523579824,11.8778488540226,3.98235415019888,9.71122544619926,5.13950046840077,6.41257271170054,1.18120757152309,2.76691633149535,4.65170927702798,8.36127577798263,7.12994756769443,4.10847785316561,0,5.15677716240934,22.1285743739962,15.665315180724,9.05510786479281,16.9326257674958,21.1034878034306,16.9450376721967,21.2268236576736,9.13394847343798,5.39744928546534,3.1774810629573,3.30792597082443,3.13283880588812,9.36493674836252,7.05661221659424,5.84924485615369,4.26766339337159,6.12109756922687,16.3174265769249,2.22132145037209,5.77883230297023,3.33350149265481,4.52084296811258,5.05768642567793,3.88922894451088,4.9293744698218,5.59805809294632,4.00779924032829,6.68269432610579,14.2351197111511,7.5228202836934,7.99239522081329,5.43629569637619,6.11415178489297,7.1478103583955,5.20716771069616,2.35580347785627,5.83267379813068,5.59205381778233,56.369293868419,11.8118071374743,9.26567546559747,9.13920585217024,6.58715099736429,8.10989402355735,14.6696548307192,6.51021924219751,13.1074180532139,16.9108884578204,49.253131070095,11.3764003426144,5.47358081283443,8.83314231617514,9.48422007737904,10.5625750443814,11.7221999320946,12.6205221995967,15.2120212989815,15.9526990918073,18.061013177235,15.4264063259366,11.5000299272908,12.0264802050412,15.8952586966934,2.26730383615211,2.66383144048878,3.13998498133165,2.85403847818933,5.21611903886914,3.19060208267009,5.67770035228522,4.93047271881851,4.51414893631827,19.7663144915973,17.4923589872727,20.0513429703789,13.9201077698387,9.59115527678899,17.3740596399631,19.5756525067224,16.6618845192962,19.0319811773366,13.4617681055473,18.9930846079043,13.9658705690361,17.5855613926758,8.99494853152688,7.75568701723535,5.1476182366004,8.44537565646138,8.44743734679466,12.194929964489,11.1186773176071,9.37873409593887,9.80856975207596,8.80230170216895,8.89949618427683,10.9701745705221,6.66811167796303,8.11190281613988,8.10218725947561,11.1263193216893,13.9838974127677,6.51451579532289,10.1161209510822,9.0605752179982,8.57543858130738,10.7284693673477,8.46146078916765,9.87811053512972,11.5750673032651,9.09887562767274,10.661703161497,8.89762635931306,7.09232273104057,7.7753898202241,8.6764631064141,8.8737041051325,5.49583271463481,8.18760629558929,9.66919743217342,6.88637995447836,5.07360263974886,5.10109238364927
|short_description=p1@Rpgr
}}
}}

Latest revision as of 00:56, 2 October 2015

Short description:p1@Rpgr
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rpgr_5end
Coexpression cluster:MCL_coexpression_mm9:782
Association with transcript: 0bp_to_ENSMUST00000115531, ENSMUST00000115536, ENSMUST00000124744, ENSMUST00000155734_5end
EntrezGene:Rpgr
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rpgr

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G721.78
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.23
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.25
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.07
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.88
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.51
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I23.02
Ileum epithelium, pool1.CNhs13199.10252-104B94.94
Ileum epithelium, pool2.CNhs13232.10253-104C17.31
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.07
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.42
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C312.95
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.01
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.62
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.23
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.08
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.49
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E119.57
Mouse Schwann, donor1.CNhs12507.11728-123D92.95
Mouse Schwann, donor2.CNhs12573.11746-123F95.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.89
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.57
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.22
accessory axillary lymph node, adult.CNhs10475.1063-29H97.25
adrenal gland, adult.CNhs10508.49-24D76.98
adrenal gland, embryo E14.CNhs11038.406-44C57.46
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F57.84
adrenal gland, neonate N00.CNhs11191.1311-23C110.82
adrenal gland, neonate N25.CNhs11223.1377-27I32.39
amnion, adult pregnant day17.5.CNhs10488.583-22A84.94
aorta, adult.CNhs10498.46-23H15.21
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F53.88
bone (os femoris), neonate N16.CNhs11225.1525-43A64.64
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B212.59
cerebellum, neonate N30.CNhs11135.1395-42I213.61
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.59
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.21
corpora quadrigemina, adult.CNhs10501.16-22A423.52
corpus striatum, adult.CNhs10487.19-21D831.57
corpus striatum, neonate N00.CNhs11226.630-43F137.70
cortex, adult.CNhs10473.12-14D524.86
cortex, neonate N30.CNhs11107.1392-42F224.29
diencephalon, adult.CNhs10482.20-12F214.13
diencephalon, neonate N30.CNhs11201.1388-42B225.31
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.39
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.60
epididymis, adult.CNhs10490.58-23B29.86
eyeball, adult.CNhs10484.31-12G413.89
eyeball, embryo E12.CNhs11016.345-16C620.43
eyeball, embryo E14.CNhs10521.399-16E216.32
eyeball, embryo E15.CNhs10593.426-16C915.13
eyeball, embryo E17.CNhs11023.1261-18D421.10
eyeball, neonate N00.CNhs11207.633-15C633.54
eyeball, neonate N01.CNhs11140.1532-43E739.33
eyeball, neonate N02.CNhs11205.1551-44G829.80
eyeball, neonate N16.CNhs11188.777-19A234.92
forelimb, embryo E11.CNhs10596.335-25E216.38
forelimb, embryo E12.CNhs10600.359-14H220.99
forelimb, embryo E13.CNhs10589.384-1E214.96
forelimb, embryo E14.CNhs10577.413-26A88.55
forelimb, embryo E15.CNhs11007.437-20E78.62
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B56.38
gonad, embryo E13.CNhs11044.1564-45I612.74
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.92
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.26
heart, embryo E11.CNhs10586.331-24E911.81
heart, embryo E12.CNhs11015.353-12F512.90
heart, embryo E13.CNhs11013.376-3I911.34
heart, embryo E14.CNhs10597.403-26D49.23
heart, embryo E15.CNhs11017.431-16C88.66
heart, embryo E16.CNhs11021.457-17C611.42
heart, embryo E17.CNhs11025.479-18E59.07
heart, embryo E18.CNhs11030.1283-20G36.71
heart, neonate N00.CNhs11213.639-21E310.16
heart, neonate N03.CNhs11221.1349-25I29.38
heart, neonate N10.CNhs11118.749-24G18.21
heart, neonate N16.CNhs11209.782-15G13.81
heart, neonate N20.CNhs11127.821-26I64.53
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E819.14
hippocampus, neonate N00.CNhs11228.627-43G120.79
intestinal mucosa, adult.CNhs10506.860-29I35.29
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I518.13
intestine, embryo E13.CNhs11010.381-16D514.86
intestine, embryo E15.CNhs10602.976-16D810.31
intestine, embryo E16.CNhs10585.463-22H49.08
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F76.09
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E95.60
intestine, neonate N06.CNhs11102.688-20B86.28
intestine, neonate N07.CNhs11095.720-20F27.56
intestine, neonate N10.CNhs11098.755-23A56.24
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E36.70
intestine, neonate N30.CNhs11131.1384-42G16.17
kidney, embryo E14.CNhs10606.411-4I99.86
kidney, embryo E15.CNhs10997.434-16F813.02
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I216.09
kidney, embryo E18.CNhs11001.1288-20C713.38
kidney, neonate N00.CNhs11214.646-21G715.36
kidney, neonate N10.CNhs11206.758-6D510.05
kidney, neonate N20.CNhs11113.832-19I17.82
kidney, neonate N25.CNhs11122.1353-25F37.69
kidney, neonate N30.CNhs11203.1385-42H16.79
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F86.34
liver, embryo E13.CNhs10524.378-3H66.49
liver, embryo E14.CNhs10594.409-16E13.82
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F45.67
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B111.27
lung, embryo E12.CNhs10522.354-16G211.18
lung, embryo E14.CNhs10604.404-26F813.85
lung, embryo E15.CNhs11020.432-17C515.11
lung, embryo E16.CNhs10998.458-17B612.91
lung, embryo E17.CNhs10605.480-44A613.57
lung, embryo E18.CNhs10583.1287-20I613.33
lung, neonate N00.CNhs11224.640-42C611.51
lung, neonate N06.CNhs11212.683-20E57.09
lung, neonate N07.CNhs11111.715-19A39.97
lung, neonate N10.CNhs11219.750-23E66.86
lung, neonate N20.CNhs11109.822-18A47.54
lung, neonate N25.CNhs11119.1359-25C76.56
lung, neonate N30.CNhs11133.1394-42H26.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C212.84
medulla oblongata, neonate N30.CNhs11200.1396-42A313.36
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I926.67
ovary, adult.CNhs10507.91-2I79.79
ovary, embryo E18.CNhs11040.505-44H75.52
ovary, neonate N00.CNhs11217.1299-22I410.59
oviduct, adult pregnant day01.CNhs10500.988-6G611.88
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F49.71
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E56.41
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D78.36
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G822.13
pituitary gland, embryo E12.CNhs11018.346-16E615.67
pituitary gland, embryo E13.CNhs11009.370-44C79.06
pituitary gland, embryo E14.CNhs11037.398-44A516.93
pituitary gland, embryo E15.CNhs10592.427-16B921.10
pituitary gland, embryo E16.CNhs11036.449-43F616.95
pituitary gland, embryo E17.CNhs11039.1265-44F521.23
pituitary gland, neonate N00.CNhs11190.1308-22E99.13
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C33.13
skin, neonate N00.CNhs11124.650-25G49.36
skin, neonate N03.CNhs11215.662-22H37.06
skin, neonate N06.CNhs11097.693-20I55.85
skin, neonate N10.CNhs11108.762-6C44.27
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C916.32
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C15.78
spleen, embryo E18.CNhs11011.1271-21F23.33
spleen, neonate N10.CNhs11116.752-24D14.52
spleen, neonate N20.CNhs11112.824-19H15.06
spleen, neonate N25.CNhs11099.1354-25G33.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.01
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E314.24
stomach, embryo E15.CNhs10603.1252-16G87.52
stomach, embryo E16.CNhs11022.459-17D47.99
stomach, embryo E17.CNhs11006.1035-18D55.44
stomach, embryo E18.CNhs10999.1286-20C66.11
stomach, neonate N03.CNhs11193.1340-24B87.15
stomach, neonate N07.CNhs11210.718-18A95.21
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I15.83
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G556.37
testis, embryo E13.CNhs11031.389-23F511.81
testis, embryo E15.CNhs11034.443-27C59.27
testis, embryo E16.CNhs11033.470-26G59.14
testis, embryo E17.CNhs11029.486-18I56.59
testis, embryo E18.CNhs11027.503-18G58.11
testis, neonate N00.CNhs11189.1300-22B714.67
testis, neonate N07.CNhs11222.726-26I46.51
testis, neonate N10.CNhs11204.763-44D913.11
testis, neonate N20.CNhs11110.839-18H316.91
testis, neonate N30.CNhs11130.1391-42E249.25
thymus, adult.CNhs10471.38-12B511.38
thymus, embryo E14.CNhs11041.402-44I45.47
thymus, embryo E15.CNhs11005.430-45I28.83
thymus, embryo E16.CNhs11002.456-26C59.48
thymus, embryo E17.CNhs10581.478-18C110.56
thymus, embryo E18.CNhs10595.1273-19G411.72
thymus, neonate N02.CNhs11181.1541-43F812.62
thymus, neonate N03.CNhs11137.2104-43C715.21
thymus, neonate N06.CNhs11197.681-26C415.95
thymus, neonate N07.CNhs11211.713-19D318.06
thymus, neonate N10.CNhs11194.748-24E415.43
thymus, neonate N20.CNhs11186.820-7A211.50
thymus, neonate N25.CNhs11125.1362-25G712.03
thymus, neonate N30.CNhs11132.1393-42G215.90
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.14
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E45.22
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E55.68
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.77
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.49
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.03
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I818.99
whole body, embryo E12.CNhs10587.857-27C913.97
whole body, embryo E13.CNhs10512.372-23H217.59
whole body, embryo E14.5.CNhs10578.420-27D28.99
whole body, embryo E14.CNhs10519.395-14B17.76
whole body, embryo E16.CNhs10514.453-14F25.15
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.19
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.12
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.81
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.80
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.98
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.12
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.06
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.46
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.10
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.09
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.68
whole body, embryo E17.5.CNhs10513.490-9F98.87
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B38.19
whole body, neonate N00.CNhs10525.657-19C29.67
whole body, neonate N01.CNhs10576.659-23C66.89
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B45.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate3.85e-2049
neurectoderm9.19e-1964
neural plate9.19e-1964
presumptive neural plate9.19e-1964
ecto-epithelium1.49e-1673
neural tube4.27e-1552
neural rod4.27e-1552
future spinal cord4.27e-1552
neural keel4.27e-1552
regional part of nervous system4.35e-1554
brain4.95e-1547
future brain4.95e-1547
anterior neural tube7.20e-1540
structure with developmental contribution from neural crest8.31e-1592
regional part of brain2.13e-1446
regional part of forebrain3.04e-1439
forebrain3.04e-1439
future forebrain3.04e-1439
ectoderm-derived structure8.61e-1395
ectoderm8.61e-1395
presumptive ectoderm8.61e-1395
central nervous system3.56e-1273
nervous system2.46e-1175
gray matter3.09e-1034
brain grey matter4.09e-1029
regional part of telencephalon4.09e-1029
telencephalon4.09e-1029
cerebral cortex6.53e-0821
cerebral hemisphere6.53e-0821
pallium6.53e-0821
embryo9.18e-08320
regional part of cerebral cortex7.27e-0717
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