FFCP PHASE1:Mm9::chrX:156940350..156940417,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chrX:156940350..156940417,+ to FFCP PHASE1:Mm9::chrX:156940350..156940417,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=110094 | |EntrezGene=110094 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BWJ3,Q6PE66,A2AHQ7,A2AHQ6,Q8BLC1 | |UniProt=Q8BWJ3,Q6PE66,A2AHQ7,A2AHQ6,Q8BLC1 | ||
|association_with_transcript=0bp_to_ENSMUST00000033652,ENSMUST00000112376,ENSMUST00000112380,ENSMUST00000146752,NM_001177878,NM_172783,uc009utl.2,uc009utm.2,uc009utn.2,uc012hrg.1_5end | |||
|cluster_id=chrX:156940350..156940417,+ | |||
|description=CAGE_peak_1_at_Phka2_5end | |||
|id=chrX:156940350..156940417,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!9.66e-11!63;UBERON:0000955!1.35e-09!50;UBERON:0006238!1.35e-09!50;UBERON:0003056!2.00e-09!49;UBERON:0002616!3.85e-09!49;UBERON:0001049!4.18e-08!52;UBERON:0005068!4.18e-08!52;UBERON:0006241!4.18e-08!52;UBERON:0007135!4.18e-08!52;UBERON:0003080!7.17e-08!40;UBERON:0002021!1.08e-07!10;UBERON:0000411!1.08e-07!10;UBERON:0001950!1.08e-07!10;UBERON:0000025!1.30e-07!114;UBERON:0002780!2.08e-07!39;UBERON:0001890!2.08e-07!39;UBERON:0006240!2.08e-07!39;UBERON:0000153!5.78e-07!94;UBERON:0004111!7.10e-07!122;UBERON:0002346!9.46e-07!71;UBERON:0003075!9.46e-07!71;UBERON:0007284!9.46e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.00e-09,49;UBERON:0000955,3.36e-09,47;UBERON:0006238,3.36e-09,47;UBERON:0002616,9.53e-09,46;UBERON:0010371,1.00e-08,73;UBERON:0010314,2.02e-08,92;UBERON:0002346,2.25e-08,64;UBERON:0003075,2.25e-08,64;UBERON:0007284,2.25e-08,64;UBERON:0001049,4.17e-08,52;UBERON:0005068,4.17e-08,52;UBERON:0006241,4.17e-08,52;UBERON:0007135,4.17e-08,52;UBERON:0000073,4.20e-08,54;UBERON:0003080,7.17e-08,40;UBERON:0002021,1.08e-07,10;UBERON:0000411,1.08e-07,10;UBERON:0001950,1.08e-07,10;UBERON:0000025,1.29e-07,114;UBERON:0002780,2.07e-07,39;UBERON:0001890,2.07e-07,39;UBERON:0006240,2.07e-07,39;UBERON:0004121,3.80e-07,95;UBERON:0000924,3.80e-07,95;UBERON:0006601,3.80e-07,95;UBERON:0004111,7.03e-07,122 | |||
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| ||
|short_description=p1@Phka2 | |||
}} | }} |
Latest revision as of 17:43, 1 October 2015
Short description: | p1@Phka2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Phka2_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000033652, ENSMUST00000112376, ENSMUST00000112380, ENSMUST00000146752, NM_001177878, NM_172783, uc009utl.2, uc009utm.2, uc009utn.2, uc012hrg.1_5end |
EntrezGene: | Phka2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 2.00e-09 | 49 |
brain | 3.36e-09 | 47 |
future brain | 3.36e-09 | 47 |
regional part of brain | 9.53e-09 | 46 |
ecto-epithelium | 1.00e-08 | 73 |
structure with developmental contribution from neural crest | 2.02e-08 | 92 |
neurectoderm | 2.25e-08 | 64 |
neural plate | 2.25e-08 | 64 |
presumptive neural plate | 2.25e-08 | 64 |
neural tube | 4.17e-08 | 52 |
neural rod | 4.17e-08 | 52 |
future spinal cord | 4.17e-08 | 52 |
neural keel | 4.17e-08 | 52 |
regional part of nervous system | 4.20e-08 | 54 |
anterior neural tube | 7.17e-08 | 40 |
occipital lobe | 1.08e-07 | 10 |
visual cortex | 1.08e-07 | 10 |
neocortex | 1.08e-07 | 10 |
tube | 1.29e-07 | 114 |
regional part of forebrain | 2.07e-07 | 39 |
forebrain | 2.07e-07 | 39 |
future forebrain | 2.07e-07 | 39 |
ectoderm-derived structure | 3.80e-07 | 95 |
ectoderm | 3.80e-07 | 95 |
presumptive ectoderm | 3.80e-07 | 95 |
anatomical conduit | 7.03e-07 | 122 |