Personal tools

FFCP PHASE1:Mm9::chr9:58049358..58049425,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:58049358..58049425,-
|DHSsupport=NA
|short_description=p2@Islr2
|DPIdataset=NA
|description=CAGE_peak_2_at_Islr2_5end
|association_with_transcript=96bp_to_ENSMUST00000163200,NM_001161535,NM_001161537,uc009pwl.1,uc012guf.1_5end
|EntrezGene=320563
|EntrezGene=320563
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=E9Q9N7,Q5RKR3
|UniProt=E9Q9N7,Q5RKR3
|association_with_transcript=96bp_to_ENSMUST00000163200,NM_001161535,NM_001161537,uc009pwl.1,uc012guf.1_5end
|cluster_id=chr9:58049358..58049425,-
|description=CAGE_peak_2_at_Islr2_5end
|id=chr9:58049358..58049425,-
|ontology_enrichment_celltype=CL:0000117!1.96e-10!23;CL:0000337!1.96e-10!23;CL:0000540!1.02e-08!33;CL:0000047!1.02e-08!33;CL:0000031!1.02e-08!33;CL:0000404!1.02e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.43e-11,23;CL:0000337,2.43e-11,23;CL:0000540,4.04e-08,33;CL:0000047,4.04e-08,33;CL:0000031,4.04e-08,33;CL:0000404,4.04e-08,33;CL:0002609,1.40e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!3.48e-21!49;UBERON:0002346!1.08e-19!71;UBERON:0003075!1.08e-19!71;UBERON:0007284!1.08e-19!71;UBERON:0000033!5.10e-18!63;UBERON:0002780!1.25e-17!39;UBERON:0001890!1.25e-17!39;UBERON:0006240!1.25e-17!39;UBERON:0003080!1.77e-17!40;UBERON:0001049!4.75e-16!52;UBERON:0005068!4.75e-16!52;UBERON:0006241!4.75e-16!52;UBERON:0007135!4.75e-16!52;UBERON:0004121!7.91e-16!102;UBERON:0000924!7.91e-16!102;UBERON:0006601!7.91e-16!102;UBERON:0001017!9.14e-16!73;UBERON:0005743!9.14e-16!73;UBERON:0000073!9.49e-16!75;UBERON:0001016!9.49e-16!75;UBERON:0002020!6.23e-15!34;UBERON:0000955!1.60e-14!50;UBERON:0006238!1.60e-14!50;UBERON:0002616!3.41e-14!49;UBERON:0002791!2.39e-13!29;UBERON:0003528!2.39e-13!29;UBERON:0001893!2.39e-13!29;UBERON:0000956!8.84e-11!21;UBERON:0001869!8.84e-11!21;UBERON:0000203!8.84e-11!21;UBERON:0000153!2.21e-09!94;UBERON:0007811!4.94e-09!86;UBERON:0002619!3.81e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0003056,7.51e-23,49;UBERON:0002346,1.63e-20,64;UBERON:0003075,1.63e-20,64;UBERON:0007284,1.63e-20,64;UBERON:0002780,8.91e-20,39;UBERON:0001890,8.91e-20,39;UBERON:0006240,8.91e-20,39;UBERON:0003080,5.70e-19,40;UBERON:0002020,3.47e-17,34;UBERON:0000073,4.90e-17,54;UBERON:0010371,9.24e-17,73;UBERON:0001049,1.96e-16,52;UBERON:0005068,1.96e-16,52;UBERON:0006241,1.96e-16,52;UBERON:0007135,1.96e-16,52;UBERON:0000955,2.58e-15,47;UBERON:0006238,2.58e-15,47;UBERON:0003528,3.59e-15,29;UBERON:0002791,3.59e-15,29;UBERON:0001893,3.59e-15,29;UBERON:0001017,4.50e-15,73;UBERON:0002616,6.47e-15,46;UBERON:0001016,2.92e-14,75;UBERON:0004121,7.10e-14,95;UBERON:0000924,7.10e-14,95;UBERON:0006601,7.10e-14,95;UBERON:0000956,1.17e-13,21;UBERON:0001869,1.17e-13,21;UBERON:0000203,1.17e-13,21;UBERON:0010314,6.77e-12,92;UBERON:0002619,2.64e-10,17;UBERON:0002021,1.59e-07,10;UBERON:0000411,1.59e-07,10;UBERON:0001950,1.59e-07,10
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,24.8849246857305,25.9205579843296,17.1134478946668,0,0,0,0,0,0.599200221036809,0,24.9891965663431,29.0262767413135,23.5563956713548,1.99955689082663,1.32521124570968,68.7173383595892,81.085268481428,71.6990653555816,0,1.0214987046815,1.68967186581868,62.7778729595723,58.3691166183374,86.4716195124222,0,0.56276261003168,0.916789486660861,1.17851434189467,2.56269025438385,7.82877672466262,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0,0,0,0.520455980298408,2.74018930480927,0.922461989024234,1.3565037649736,1.41106448562846,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,1.83000241127451,53.4030996479674,3.99795936442236,6.90431734791892,0.83115217823824,4.38051410282946,0.203678727700633,0.248813941220186,0,0,1.69156575851515,12.644615743841,20.8872070574205,12.5084998803643,9.11689088627793,6.53379973452734,5.24729657534481,0.776110112217047,0.646703978798527,1.13463648100692,0.703804496655795,1.09597866213787,0.556094498451196,0,0.411564272815887,1.39323986772945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,7.99101804543684,74.7087485873605,0,0,0,2.09013004674395,0.902072229254653,0.605050573870028,1.33426826306922,1.33157938278791,0,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0,0.456994050438915,0,0,0.387904974335251,0.140271639780637,0,0,0,0,0,0.333690211432188,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89304931649754,1.56175497718655,0,0.716906393857656,0.891194696329576,0.566153061577665,0,0,0,2.24924921495265,0,0,0,0,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,8.10274923140896,15.6524007377133,12.6458850668639,14.896579625951,9.81028496811388,5.43011767986999,3.95804433848979,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,1.89801596148681,1.62655573701479,1.83609079397062,1.25452977608681,1.09181281873089,0.269728692769641,0.247960367176008,0,0,0,0,2.99033092087958,2.31641886639937,3.50012139019286,7.36210993823067,4.05494701177868,9.03650737572305,3.1249052362548,0,0,0,0,0,0.102710957164827,0,0.537080087002444,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,7.34177395402186,8.28585425712918,5.15605962095457,6.53042092906013,2.74033007908257,4.5323633843382,3.37511250115903,4.95353323546643,4.07828168085784,3.62432218226274,1.86817225651518,10.3746467084268,11.9513524027894,3.64660075602441,6.49800804146745,4.96377472815038,3.77819437262746,5.76898160268904,4.81378814387723,3.28506375292937,4.81610669791456,2.64076877940507,3.55837728385553,4.03358460150676,3.84817642002609,2.85776214769844,3.1288768005111,5.40145817298374,4.53294490883637,4.56316652416632,1.37147700954166,2.48466128623072,5.00715998889374,5.52316383202848,4.42314087952054,4.23073039458383,3.10977553883713,1.8414879800649,3.66671107383827,1.68342681497322,3.79632057997357,3.74317033027141,6.13846564754534,4.02835787083512,5.01557188550968,15.9878769880285,3.27504251823572,2.79332370262788,0.57386499620653,0,0
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,24.8849246857305,25.9205579843296,17.1134478946668,0,0,0,0,0,0.599200221036809,0,24.9891965663431,29.0262767413135,23.5563956713548,1.99955689082663,1.32521124570968,68.7173383595892,81.085268481428,71.6990653555816,0,1.0214987046815,1.68967186581868,62.7778729595723,58.3691166183374,86.4716195124222,0,0.56276261003168,0.916789486660861,1.17851434189467,2.56269025438385,7.82877672466262,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0,0,0,0.520455980298408,2.74018930480927,0.922461989024234,1.3565037649736,1.41106448562846,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,1.83000241127451,53.4030996479674,3.99795936442236,6.90431734791892,0.83115217823824,4.38051410282946,0.203678727700633,0.248813941220186,0,0,1.69156575851515,12.644615743841,20.8872070574205,12.5084998803643,9.11689088627793,6.53379973452734,5.24729657534481,0.776110112217047,0.646703978798527,1.13463648100692,0.703804496655795,1.09597866213787,0.556094498451196,0,0.411564272815887,1.39323986772945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,7.99101804543684,74.7087485873605,0,0,0,2.09013004674395,0.902072229254653,0.605050573870028,1.33426826306922,1.33157938278791,0,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0,0.456994050438915,0,0,0.387904974335251,0.140271639780637,0,0,0,0,0,0.333690211432188,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89304931649754,1.56175497718655,0,0.716906393857656,0.891194696329576,0.566153061577665,0,0,0,2.24924921495265,0,0,0,0,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,8.10274923140896,15.6524007377133,12.6458850668639,14.896579625951,9.81028496811388,5.43011767986999,3.95804433848979,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,1.89801596148681,1.62655573701479,1.83609079397062,1.25452977608681,1.09181281873089,0.269728692769641,0.247960367176008,0,0,0,0,2.99033092087958,2.31641886639937,3.50012139019286,7.36210993823067,4.05494701177868,9.03650737572305,3.1249052362548,0,0,0,0,0,0.102710957164827,0,0.537080087002444,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,7.34177395402186,8.28585425712918,5.15605962095457,6.53042092906013,2.74033007908257,4.5323633843382,3.37511250115903,4.95353323546643,4.07828168085784,3.62432218226274,1.86817225651518,10.3746467084268,11.9513524027894,3.64660075602441,6.49800804146745,4.96377472815038,3.77819437262746,5.76898160268904,4.81378814387723,3.28506375292937,4.81610669791456,2.64076877940507,3.55837728385553,4.03358460150676,3.84817642002609,2.85776214769844,3.1288768005111,5.40145817298374,4.53294490883637,4.56316652416632,1.37147700954166,2.48466128623072,5.00715998889374,5.52316383202848,4.42314087952054,4.23073039458383,3.10977553883713,1.8414879800649,3.66671107383827,1.68342681497322,3.79632057997357,3.74317033027141,6.13846564754534,4.02835787083512,5.01557188550968,15.9878769880285,3.27504251823572,2.79332370262788,0.57386499620653,0,0
|short_description=p2@Islr2
}}
}}

Latest revision as of 22:03, 26 September 2015

Short description:p2@Islr2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Islr2_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 96bp_to_ENSMUST00000163200, NM_001161535, NM_001161537, uc009pwl.1, uc012guf.1_5end
EntrezGene:Islr2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Islr2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C324.88
Mouse Granule cells, donor2.CNhs12357.11731-123E325.92
Mouse Granule cells, donor3.CNhs12108.11636-122C717.11
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D524.99
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F529.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D923.56
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D268.72
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F281.09
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D671.70
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D462.78
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F458.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D886.47
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.83
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F153.40
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F26.90
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E212.64
eyeball, embryo E15.CNhs10593.426-16C920.89
eyeball, embryo E17.CNhs11023.1261-18D412.51
eyeball, neonate N00.CNhs11207.633-15C69.12
eyeball, neonate N01.CNhs11140.1532-43E76.53
eyeball, neonate N02.CNhs11205.1551-44G85.25
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E87.99
hippocampus, neonate N00.CNhs11228.627-43G174.71
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E68.10
pituitary gland, embryo E13.CNhs11009.370-44C715.65
pituitary gland, embryo E14.CNhs11037.398-44A512.65
pituitary gland, embryo E15.CNhs10592.427-16B914.90
pituitary gland, embryo E16.CNhs11036.449-43F69.81
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.99
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I57.36
testis, embryo E18.CNhs11027.503-18G54.05
testis, neonate N00.CNhs11189.1300-22B79.04
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H211.95
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B16.50
whole body, embryo E16.CNhs10514.453-14F24.96
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.03
whole body, embryo E17.5.CNhs10513.490-9F95.02
whole body, embryo E17.CNhs10517.475-3I515.99
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.43e-1123
neuroblast (sensu Vertebrata)2.43e-1123
neuron4.04e-0833
neuronal stem cell4.04e-0833
neuroblast4.04e-0833
electrically signaling cell4.04e-0833
neuron of cerebral cortex1.40e-076

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate7.51e-2349
neurectoderm1.63e-2064
neural plate1.63e-2064
presumptive neural plate1.63e-2064
regional part of forebrain8.91e-2039
forebrain8.91e-2039
future forebrain8.91e-2039
anterior neural tube5.70e-1940
gray matter3.47e-1734
regional part of nervous system4.90e-1754
ecto-epithelium9.24e-1773
neural tube1.96e-1652
neural rod1.96e-1652
future spinal cord1.96e-1652
neural keel1.96e-1652
brain2.58e-1547
future brain2.58e-1547
brain grey matter3.59e-1529
regional part of telencephalon3.59e-1529
telencephalon3.59e-1529
central nervous system4.50e-1573
regional part of brain6.47e-1546
nervous system2.92e-1475
ectoderm-derived structure7.10e-1495
ectoderm7.10e-1495
presumptive ectoderm7.10e-1495
cerebral cortex1.17e-1321
cerebral hemisphere1.17e-1321
pallium1.17e-1321
structure with developmental contribution from neural crest6.77e-1292
regional part of cerebral cortex2.64e-1017
occipital lobe1.59e-0710
visual cortex1.59e-0710
neocortex1.59e-0710
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:58049358..58049425,-&oldid=4276758"