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FFCP PHASE1:Mm9::chr9:56482905..56482942,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:56482905..56482942,-
|DHSsupport=NA
|short_description=p2@Lingo1
|DPIdataset=NA
|description=CAGE_peak_2_at_Lingo1_5end
|association_with_transcript=266bp_to_uc009pth.1_5end
|EntrezGene=235402
|EntrezGene=235402
|HGNC=
|HGNC=
|MCL_coexpression_id=864
|TSSclassifier=NA
|UniProt=A9DA50
|UniProt=A9DA50
|association_with_transcript=266bp_to_uc009pth.1_5end
|cluster_id=chr9:56482905..56482942,-
|description=CAGE_peak_2_at_Lingo1_5end
|id=chr9:56482905..56482942,-
|ontology_enrichment_celltype=CL:0000117!3.49e-09!23;CL:0000337!3.49e-09!23;CL:0000221!2.37e-07!44;CL:0000133!2.37e-07!44;CL:0002319!2.61e-07!43;CL:0000055!3.82e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.51e-12,23;CL:0000337,3.51e-12,23;CL:0002319,2.70e-08,43;CL:0000221,5.76e-08,44;CL:0000133,5.76e-08,44;CL:0000393,8.25e-08,39;CL:0000211,8.25e-08,39;CL:0000540,5.67e-07,33;CL:0000047,5.67e-07,33;CL:0000031,5.67e-07,33;CL:0000404,5.67e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.87e-21!75;UBERON:0001016!1.87e-21!75;UBERON:0004121!2.90e-21!102;UBERON:0000924!2.90e-21!102;UBERON:0006601!2.90e-21!102;UBERON:0001017!6.56e-21!73;UBERON:0005743!6.56e-21!73;UBERON:0002346!1.18e-20!71;UBERON:0003075!1.18e-20!71;UBERON:0007284!1.18e-20!71;UBERON:0001049!1.86e-19!52;UBERON:0005068!1.86e-19!52;UBERON:0006241!1.86e-19!52;UBERON:0007135!1.86e-19!52;UBERON:0000033!3.09e-19!63;UBERON:0000955!3.38e-18!50;UBERON:0006238!3.38e-18!50;UBERON:0002616!1.10e-17!49;UBERON:0003056!5.94e-16!49;UBERON:0002020!1.76e-14!34;UBERON:0003080!9.62e-14!40;UBERON:0002780!3.10e-13!39;UBERON:0001890!3.10e-13!39;UBERON:0006240!3.10e-13!39;UBERON:0002791!1.59e-11!29;UBERON:0003528!1.59e-11!29;UBERON:0001893!1.59e-11!29;UBERON:0007811!6.00e-10!86;UBERON:0002021!9.61e-09!10;UBERON:0000411!9.61e-09!10;UBERON:0001950!9.61e-09!10;UBERON:0000153!1.39e-08!94;UBERON:0000956!1.61e-08!21;UBERON:0001869!1.61e-08!21;UBERON:0000203!1.61e-08!21;UBERON:0002619!1.72e-07!17;UBERON:0000025!9.60e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.53e-26,75;UBERON:0001017,4.19e-26,73;UBERON:0004121,2.99e-25,95;UBERON:0000924,2.99e-25,95;UBERON:0006601,2.99e-25,95;UBERON:0000073,3.05e-25,54;UBERON:0002346,6.61e-24,64;UBERON:0003075,6.61e-24,64;UBERON:0007284,6.61e-24,64;UBERON:0001049,4.35e-23,52;UBERON:0005068,4.35e-23,52;UBERON:0006241,4.35e-23,52;UBERON:0007135,4.35e-23,52;UBERON:0002020,6.12e-21,34;UBERON:0010371,2.00e-20,73;UBERON:0003056,2.21e-18,49;UBERON:0000955,2.87e-18,47;UBERON:0006238,2.87e-18,47;UBERON:0002616,1.73e-17,46;UBERON:0003528,5.86e-16,29;UBERON:0002791,5.86e-16,29;UBERON:0001893,5.86e-16,29;UBERON:0003080,6.43e-16,40;UBERON:0002780,4.06e-15,39;UBERON:0001890,4.06e-15,39;UBERON:0006240,4.06e-15,39;UBERON:0002021,3.97e-14,10;UBERON:0000411,3.97e-14,10;UBERON:0001950,3.97e-14,10;UBERON:0010314,1.14e-12,92;UBERON:0000956,2.49e-10,21;UBERON:0001869,2.49e-10,21;UBERON:0000203,2.49e-10,21;UBERON:0002619,2.86e-10,17;UBERON:0003076,6.08e-08,12;UBERON:0003057,6.08e-08,12;UBERON:0000025,7.98e-08,114;UBERON:0002240,2.28e-07,6;UBERON:0005174,2.28e-07,6;UBERON:0001137,2.28e-07,6;UBERON:0002420,4.46e-07,8;UBERON:0007245,4.46e-07,8;UBERON:0010009,4.46e-07,8;UBERON:0010011,4.46e-07,8;UBERON:0000454,4.46e-07,8
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0,2.97651515528744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,3.34543873024398,4.03802854755699,0.782391344348039,1.74420125104357,0.439372365468944,0,0.55994568650145,4.31257693094915,0,0,0,0.257259436035947,0,0,8.29497489524351,12.1667925232568,7.60597684207415,0,0,0,0.988866362566974,0,4.19440154725767,4.2264013585371,0.311068836925433,0.945041568321835,1.05162480675691,6.85562362569129,5.52171352379034,0.489963196859816,0.670918297127655,0,5.50579404996943,7.78892762319645,5.83704826373725,9.62769900430415,11.618930737506,6.77187381723788,2.51264699101243,0,4.12555268997387,5.59794312399969,5.83723891276322,7.45597783301202,0.454357159999104,1.5870027622425,0,0,0,0,0,0,0.702222100658759,0,0,0,0.422530259330042,0,0,0,0,0,0,1.25602267690966,1.03575153458869,0.445326417194474,0.520455980298408,0.304465478312141,0.461230994512117,0.904335843315735,0.705532242814229,0,0,0,0,0.161766849947409,0.220841518460394,0,0,1.17112318804619,0.628340120440365,0,0,0,0,2.84602214869163,7.32000964509802,1.88481528169297,40.5010666048004,32.2201476236216,6.44142938134636,8.27430441645564,0.203678727700633,19.2830804445644,109.934399918648,0.210441855886474,0.130120442962704,1.14951052216736,2.16074555766419,1.65775299619287,2.4493139694478,2.17793324484245,1.3118241438362,0.517406741478031,0,0,0,0.657587197282725,0.278047249225598,0,0,0.796137067273973,0,0,0,0.414251545071004,0,0.540186184383045,0.23674473558521,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.492502392237286,0.486412857275134,0.146199987425332,0.219550115291051,0,14.2997165023607,5.04232600658494,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0.456994050438915,0,0,0.387904974335251,0.140271639780637,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.325929952884052,0.339490171550376,0,0.502518772325447,0.714130922658041,0.390267295715598,0.315270288212382,0.221464689648775,0.318909537314974,0,0.172684981865896,0.144649058581512,0,0,0,0,2.40825884981688,1.52375192569864,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0,0,2.24924921495265,0,0.35613120733451,0,0,0,0.485561272309963,0.604647113929502,1.13163047853539,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0.720244376125241,0.388076051348264,0.428674070063185,0,1.24858172321449,0.987294123612726,1.8267896946876,0.469343416127421,0,0,0.8244312647074,0,0.241251699712623,0.238744688006273,1.31312719796049,0,2.41052892613663,0.170870880797853,0.619160603889667,0.555583582109135,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0.609958401380546,0,0.627264888043406,0.436725127492355,0,0,0,0,0,0,0.598066184175915,0.66183396182839,0.388902376688095,1.03327858782185,1.01373675294467,0,0.13020438484395,0.104859344425711,0,0.576060012515731,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0.360586348559907,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0.221985953374065,0.179427713218951,0.167884616364078,0,0,0.183151624267265,0,0,38.4031252979605,31.7624413189952,34.9466263198032,30.0743069101453,46.5856113444037,41.5466643564335,43.2014400148356,40.9792294934041,49.8456649882625,42.9741058754011,0.518936737920883,1.19707462020309,1.53660245178721,0.486213434136588,0.628839487883947,0.551530525350042,1.55572709461131,1.03017528619447,0.64183841918363,1.26348605881899,1.2673964994512,1.32038438970253,0.749132059759059,1.28050304809739,0.459483751644906,0.952587382566147,0.811190281613988,0.964546102318525,0.824171801606613,1.17759136107518,0.685738504770831,1.24233064311536,1.66905332963125,1.16277133305863,0.752875043322645,0.761531471025089,1.28049581010941,1.05227884575137,0.950628796921032,1.68342681497322,1.18635018124174,0.985044823755635,0.818462086339379,0.77468420592983,0.964533054905707,1.49886346762768,0.467863216890817,0.644613162144895,0.57386499620653,0.220591419119515,0
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0,2.97651515528744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,3.34543873024398,4.03802854755699,0.782391344348039,1.74420125104357,0.439372365468944,0,0.55994568650145,4.31257693094915,0,0,0,0.257259436035947,0,0,8.29497489524351,12.1667925232568,7.60597684207415,0,0,0,0.988866362566974,0,4.19440154725767,4.2264013585371,0.311068836925433,0.945041568321835,1.05162480675691,6.85562362569129,5.52171352379034,0.489963196859816,0.670918297127655,0,5.50579404996943,7.78892762319645,5.83704826373725,9.62769900430415,11.618930737506,6.77187381723788,2.51264699101243,0,4.12555268997387,5.59794312399969,5.83723891276322,7.45597783301202,0.454357159999104,1.5870027622425,0,0,0,0,0,0,0.702222100658759,0,0,0,0.422530259330042,0,0,0,0,0,0,1.25602267690966,1.03575153458869,0.445326417194474,0.520455980298408,0.304465478312141,0.461230994512117,0.904335843315735,0.705532242814229,0,0,0,0,0.161766849947409,0.220841518460394,0,0,1.17112318804619,0.628340120440365,0,0,0,0,2.84602214869163,7.32000964509802,1.88481528169297,40.5010666048004,32.2201476236216,6.44142938134636,8.27430441645564,0.203678727700633,19.2830804445644,109.934399918648,0.210441855886474,0.130120442962704,1.14951052216736,2.16074555766419,1.65775299619287,2.4493139694478,2.17793324484245,1.3118241438362,0.517406741478031,0,0,0,0.657587197282725,0.278047249225598,0,0,0.796137067273973,0,0,0,0.414251545071004,0,0.540186184383045,0.23674473558521,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.492502392237286,0.486412857275134,0.146199987425332,0.219550115291051,0,14.2997165023607,5.04232600658494,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0.456994050438915,0,0,0.387904974335251,0.140271639780637,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.325929952884052,0.339490171550376,0,0.502518772325447,0.714130922658041,0.390267295715598,0.315270288212382,0.221464689648775,0.318909537314974,0,0.172684981865896,0.144649058581512,0,0,0,0,2.40825884981688,1.52375192569864,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0,0,2.24924921495265,0,0.35613120733451,0,0,0,0.485561272309963,0.604647113929502,1.13163047853539,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0.720244376125241,0.388076051348264,0.428674070063185,0,1.24858172321449,0.987294123612726,1.8267896946876,0.469343416127421,0,0,0.8244312647074,0,0.241251699712623,0.238744688006273,1.31312719796049,0,2.41052892613663,0.170870880797853,0.619160603889667,0.555583582109135,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0.609958401380546,0,0.627264888043406,0.436725127492355,0,0,0,0,0,0,0.598066184175915,0.66183396182839,0.388902376688095,1.03327858782185,1.01373675294467,0,0.13020438484395,0.104859344425711,0,0.576060012515731,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0.360586348559907,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0.221985953374065,0.179427713218951,0.167884616364078,0,0,0.183151624267265,0,0,38.4031252979605,31.7624413189952,34.9466263198032,30.0743069101453,46.5856113444037,41.5466643564335,43.2014400148356,40.9792294934041,49.8456649882625,42.9741058754011,0.518936737920883,1.19707462020309,1.53660245178721,0.486213434136588,0.628839487883947,0.551530525350042,1.55572709461131,1.03017528619447,0.64183841918363,1.26348605881899,1.2673964994512,1.32038438970253,0.749132059759059,1.28050304809739,0.459483751644906,0.952587382566147,0.811190281613988,0.964546102318525,0.824171801606613,1.17759136107518,0.685738504770831,1.24233064311536,1.66905332963125,1.16277133305863,0.752875043322645,0.761531471025089,1.28049581010941,1.05227884575137,0.950628796921032,1.68342681497322,1.18635018124174,0.985044823755635,0.818462086339379,0.77468420592983,0.964533054905707,1.49886346762768,0.467863216890817,0.644613162144895,0.57386499620653,0.220591419119515,0
|short_description=p2@Lingo1
}}
}}

Latest revision as of 21:11, 26 September 2015

Short description:p2@Lingo1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lingo1_5end
Coexpression cluster:MCL_coexpression_mm9:864
Association with transcript: 266bp_to_uc009pth.1_5end
EntrezGene:Lingo1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lingo1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.35
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.04
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C38.29
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.63
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.62
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.46
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F91.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.85
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D540.50
cortex, neonate N30.CNhs11107.1392-42F232.22
diencephalon, adult.CNhs10482.20-12F26.44
diencephalon, neonate N30.CNhs11201.1388-42B28.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.28
epididymis, adult.CNhs10490.58-23B2109.93
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E814.30
hippocampus, neonate N00.CNhs11228.627-43G15.04
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A138.40
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A231.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A334.95
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D730.07
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A446.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A541.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A643.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A740.98
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A849.85
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A942.97
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.51e-1223
neuroblast (sensu Vertebrata)3.51e-1223
neural cell2.70e-0843
ectodermal cell5.76e-0844
neurectodermal cell5.76e-0844
electrically responsive cell8.25e-0839
electrically active cell8.25e-0839
neuron5.67e-0733
neuronal stem cell5.67e-0733
neuroblast5.67e-0733
electrically signaling cell5.67e-0733

Uber anatomy
Ontology termp-valuen
nervous system2.53e-2675
central nervous system4.19e-2673
ectoderm-derived structure2.99e-2595
ectoderm2.99e-2595
presumptive ectoderm2.99e-2595
regional part of nervous system3.05e-2554
neurectoderm6.61e-2464
neural plate6.61e-2464
presumptive neural plate6.61e-2464
neural tube4.35e-2352
neural rod4.35e-2352
future spinal cord4.35e-2352
neural keel4.35e-2352
gray matter6.12e-2134
ecto-epithelium2.00e-2073
pre-chordal neural plate2.21e-1849
brain2.87e-1847
future brain2.87e-1847
regional part of brain1.73e-1746
brain grey matter5.86e-1629
regional part of telencephalon5.86e-1629
telencephalon5.86e-1629
anterior neural tube6.43e-1640
regional part of forebrain4.06e-1539
forebrain4.06e-1539
future forebrain4.06e-1539
occipital lobe3.97e-1410
visual cortex3.97e-1410
neocortex3.97e-1410
structure with developmental contribution from neural crest1.14e-1292
cerebral cortex2.49e-1021
cerebral hemisphere2.49e-1021
pallium2.49e-1021
regional part of cerebral cortex2.86e-1017
posterior neural tube6.08e-0812
chordal neural plate6.08e-0812
tube7.98e-08114
spinal cord2.28e-076
dorsal region element2.28e-076
dorsum2.28e-076
basal ganglion4.46e-078
nuclear complex of neuraxis4.46e-078
aggregate regional part of brain4.46e-078
collection of basal ganglia4.46e-078
cerebral subcortex4.46e-078
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