FFCP PHASE1:Mm9::chr9:50583452..50583474,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr9:50583452..50583474,+ to FFCP PHASE1:Mm9::chr9:50583452..50583474,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=102580 | |EntrezGene=102580 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=E0CZ10 | |UniProt=E0CZ10 | ||
|association_with_transcript=0bp_to_ENSMUST00000159576_5end | |||
|cluster_id=chr9:50583452..50583474,+ | |||
|description=CAGE_peak_2_at_Alg9_5end | |||
|id=chr9:50583452..50583474,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.70e-08!23;CL:0000337!8.70e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.05e-08,23;CL:0000337,4.05e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.06e-15!63;UBERON:0001049!1.83e-13!52;UBERON:0005068!1.83e-13!52;UBERON:0006241!1.83e-13!52;UBERON:0007135!1.83e-13!52;UBERON:0003056!2.77e-13!49;UBERON:0002020!3.99e-12!34;UBERON:0000955!5.21e-12!50;UBERON:0006238!5.21e-12!50;UBERON:0004121!6.83e-12!102;UBERON:0000924!6.83e-12!102;UBERON:0006601!6.83e-12!102;UBERON:0002616!7.49e-12!49;UBERON:0002346!2.24e-11!71;UBERON:0003075!2.24e-11!71;UBERON:0007284!2.24e-11!71;UBERON:0003080!4.98e-11!40;UBERON:0002780!1.53e-10!39;UBERON:0001890!1.53e-10!39;UBERON:0006240!1.53e-10!39;UBERON:0001017!2.15e-10!73;UBERON:0005743!2.15e-10!73;UBERON:0000073!8.40e-10!75;UBERON:0001016!8.40e-10!75;UBERON:0002791!1.03e-09!29;UBERON:0003528!1.03e-09!29;UBERON:0001893!1.03e-09!29;UBERON:0000153!8.03e-08!94;UBERON:0007811!5.91e-07!86;UBERON:0000956!8.14e-07!21;UBERON:0001869!8.14e-07!21;UBERON:0000203!8.14e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.48e-14,54;UBERON:0010371,2.08e-14,73;UBERON:0002346,3.83e-14,64;UBERON:0003075,3.83e-14,64;UBERON:0007284,3.83e-14,64;UBERON:0003056,6.58e-14,49;UBERON:0001049,9.89e-14,52;UBERON:0005068,9.89e-14,52;UBERON:0006241,9.89e-14,52;UBERON:0007135,9.89e-14,52;UBERON:0004121,1.21e-13,95;UBERON:0000924,1.21e-13,95;UBERON:0006601,1.21e-13,95;UBERON:0002020,1.09e-12,34;UBERON:0003080,1.56e-11,40;UBERON:0002780,5.09e-11,39;UBERON:0001890,5.09e-11,39;UBERON:0006240,5.09e-11,39;UBERON:0000955,6.38e-11,47;UBERON:0006238,6.38e-11,47;UBERON:0002616,9.30e-11,46;UBERON:0001017,1.06e-10,73;UBERON:0003528,3.78e-10,29;UBERON:0002791,3.78e-10,29;UBERON:0001893,3.78e-10,29;UBERON:0001016,4.90e-10,75;UBERON:0000956,4.26e-07,21;UBERON:0001869,4.26e-07,21;UBERON:0000203,4.26e-07,21;UBERON:0002619,7.04e-07,17 | |||
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| ||
|short_description=p2@Alg9 | |||
}} | }} |
Latest revision as of 19:40, 26 September 2015
Short description: | p2@Alg9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Alg9_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000159576_5end |
EntrezGene: | Alg9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.05e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.05e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.48e-14 | 54 |
ecto-epithelium | 2.08e-14 | 73 |
neurectoderm | 3.83e-14 | 64 |
neural plate | 3.83e-14 | 64 |
presumptive neural plate | 3.83e-14 | 64 |
pre-chordal neural plate | 6.58e-14 | 49 |
neural tube | 9.89e-14 | 52 |
neural rod | 9.89e-14 | 52 |
future spinal cord | 9.89e-14 | 52 |
neural keel | 9.89e-14 | 52 |
ectoderm-derived structure | 1.21e-13 | 95 |
ectoderm | 1.21e-13 | 95 |
presumptive ectoderm | 1.21e-13 | 95 |
gray matter | 1.09e-12 | 34 |
anterior neural tube | 1.56e-11 | 40 |
regional part of forebrain | 5.09e-11 | 39 |
forebrain | 5.09e-11 | 39 |
future forebrain | 5.09e-11 | 39 |
brain | 6.38e-11 | 47 |
future brain | 6.38e-11 | 47 |
regional part of brain | 9.30e-11 | 46 |
central nervous system | 1.06e-10 | 73 |
brain grey matter | 3.78e-10 | 29 |
regional part of telencephalon | 3.78e-10 | 29 |
telencephalon | 3.78e-10 | 29 |
nervous system | 4.90e-10 | 75 |
cerebral cortex | 4.26e-07 | 21 |
cerebral hemisphere | 4.26e-07 | 21 |
pallium | 4.26e-07 | 21 |
regional part of cerebral cortex | 7.04e-07 | 17 |