FFCP PHASE1:Mm9::chr9:34296372..34296392,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr9:34296372..34296392,+ to FFCP PHASE1:Mm9::chr9:34296372..34296392,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67703 | |EntrezGene=67703 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BR86 | |UniProt=Q8BR86 | ||
|association_with_transcript=56bp_to_NM_001190911,NM_001190912,NM_001190913,NM_001190914,NM_026324_5end | |||
|cluster_id=chr9:34296372..34296392,+ | |||
|description=CAGE_peak_3_at_Kirrel3_5end | |||
|id=chr9:34296372..34296392,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.84e-12!23;CL:0000337!2.84e-12!23;CL:0000540!1.22e-11!33;CL:0000047!1.22e-11!33;CL:0000031!1.22e-11!33;CL:0000404!1.22e-11!33;CL:0000221!4.69e-11!44;CL:0000133!4.69e-11!44;CL:0002319!1.12e-10!43;CL:0000393!8.34e-09!39;CL:0000211!8.34e-09!39;CL:0000055!7.06e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.53e-14,23;CL:0000337,1.53e-14,23;CL:0000540,3.17e-13,33;CL:0000047,3.17e-13,33;CL:0000031,3.17e-13,33;CL:0000404,3.17e-13,33;CL:0000221,6.85e-12,44;CL:0000133,6.85e-12,44;CL:0002319,1.91e-11,43;CL:0000393,6.43e-10,39;CL:0000211,6.43e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.28e-29!73;UBERON:0005743!4.28e-29!73;UBERON:0000073!3.88e-28!75;UBERON:0001016!3.88e-28!75;UBERON:0004121!1.87e-26!102;UBERON:0000924!1.87e-26!102;UBERON:0006601!1.87e-26!102;UBERON:0001049!4.50e-25!52;UBERON:0005068!4.50e-25!52;UBERON:0006241!4.50e-25!52;UBERON:0007135!4.50e-25!52;UBERON:0000033!1.60e-24!63;UBERON:0002346!1.73e-24!71;UBERON:0003075!1.73e-24!71;UBERON:0007284!1.73e-24!71;UBERON:0000955!2.71e-23!50;UBERON:0006238!2.71e-23!50;UBERON:0002616!1.57e-22!49;UBERON:0003056!2.02e-20!49;UBERON:0003080!7.81e-20!40;UBERON:0002780!4.04e-19!39;UBERON:0001890!4.04e-19!39;UBERON:0006240!4.04e-19!39;UBERON:0002020!4.04e-19!34;UBERON:0002791!2.62e-16!29;UBERON:0003528!2.62e-16!29;UBERON:0001893!2.62e-16!29;UBERON:0000153!3.64e-16!94;UBERON:0007811!1.15e-14!86;UBERON:0000956!2.57e-11!21;UBERON:0001869!2.57e-11!21;UBERON:0000203!2.57e-11!21;UBERON:0002619!1.79e-09!17;UBERON:0000468!3.88e-08!333;UBERON:0002021!1.71e-07!10;UBERON:0000411!1.71e-07!10;UBERON:0001950!1.71e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.37e-34,73;UBERON:0001016,3.35e-32,75;UBERON:0002346,8.47e-31,64;UBERON:0003075,8.47e-31,64;UBERON:0007284,8.47e-31,64;UBERON:0000073,2.98e-30,54;UBERON:0001049,1.15e-29,52;UBERON:0005068,1.15e-29,52;UBERON:0006241,1.15e-29,52;UBERON:0007135,1.15e-29,52;UBERON:0004121,5.76e-29,95;UBERON:0000924,5.76e-29,95;UBERON:0006601,5.76e-29,95;UBERON:0010371,3.83e-27,73;UBERON:0000955,3.15e-26,47;UBERON:0006238,3.15e-26,47;UBERON:0002616,2.59e-25,46;UBERON:0003056,4.69e-23,49;UBERON:0003080,6.44e-23,40;UBERON:0002780,4.65e-22,39;UBERON:0001890,4.65e-22,39;UBERON:0006240,4.65e-22,39;UBERON:0002020,5.21e-22,34;UBERON:0003528,1.31e-18,29;UBERON:0002791,1.31e-18,29;UBERON:0001893,1.31e-18,29;UBERON:0010314,1.65e-17,92;UBERON:0000956,1.32e-12,21;UBERON:0001869,1.32e-12,21;UBERON:0000203,1.32e-12,21;UBERON:0002619,2.23e-10,17;UBERON:0002021,9.41e-09,10;UBERON:0000411,9.41e-09,10;UBERON:0001950,9.41e-09,10;UBERON:0002420,2.71e-07,8;UBERON:0007245,2.71e-07,8;UBERON:0010009,2.71e-07,8;UBERON:0010011,2.71e-07,8;UBERON:0000454,2.71e-07,8;UBERON:0003076,3.72e-07,12;UBERON:0003057,3.72e-07,12 | |||
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,1.11514624341466,0.550640256485045,0,1.96222640742402,0.878744730937887,1.55543919259427,1.39986421625363,1.43752564364972,0,0,0,0,0,0,7.28339259094552,8.46385566835253,6.33831403506179,0.338844532069132,0,0,0,0,1.49800055259202,3.45796474789399,4.25127410464758,5.67024940993101,3.99617426567626,12.5686433137674,10.6016899656774,6.00204916153275,6.3258010872036,5.51531271966013,1.10115880999389,8.42736431362239,7.98753972932466,10.1552441552249,12.4423195299277,15.6274011167028,8.65467296904281,7.31591393041184,9.16789486660861,5.30331453852602,6.69146899755784,8.38797506213853,0.37863096666592,0.226714680320357,0,0,0,0,0.649776417447669,0,0.421333260395256,0,0.259786004602869,0.35333957451034,4.08445917352373,1.28326477414318,5.09610479413291,7.11066703153331,0,0,0,0.22836775943812,0.258937883647172,0.148442139064825,1.73485326766136,1.21786191324856,0.461230994512117,0.150722640552623,1.05829836422134,0.251333182659351,0.247194967734374,0.144599356919912,0,0.647067399789637,0,0,0,38.9398460025358,51.7333365829234,0,0,0,0,14.8292733010774,18.3000241127451,19.6020789296068,13.9059456153821,16.6215047264715,11.6361304953354,14.1149898868949,0.81471491080253,0.746441823660558,1.0108910337347,1.47309299120532,1.17108398666433,0.689706313300419,1.62055916824814,1.65775299619287,2.10913147369116,2.0498195245576,3.37326208415024,2.32833033665114,0.646703978798527,3.59301552318857,7.9178005873777,2.19195732427575,5.28289773528636,1.74126083261083,1.23469281844766,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0.36012412292203,0.23674473558521,0.590292695242212,0.154267112887378,0.232533944750408,0.268273401399619,0,0.16455984991348,0.656669856316381,0.405344047729279,0.146199987425332,1.09775057645525,0.134206418760372,12.4071069652835,6.68879980465349,0.330418782983798,0,1.06644125267617,0.232236671860439,0.38660238396628,0.605050573870028,0.667134131534611,0,0,0.329397909448022,0.502670417600539,0.397912944082302,0.38992817423824,0,0,0.199141273254367,0.758671603812327,1.02823661348756,3.38123207019241,0.610953983535943,1.16371492300575,0.420814919341911,0.948548056863859,0.738050739898011,0.156998727841375,0.493588655687202,0,0.667380422864376,0.393117990226406,0.449724224769707,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.369506380333209,1.32643988239339,1.14075483509418,0.509235257325564,0.704070744865506,0.837531287209079,0,0.195133647857799,0.945810864637146,1.7717175171902,1.11618338060241,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,2.75936746304733,7.86697890940181,11.4867452860359,0.327869890753351,1.00988370881749,2.2085575359138,1.56175497718655,3.23135096599198,0.238968797952552,0.891194696329576,0,2.02405350837447,2.04579100537918,2.76701444562566,18.315315036043,0.141940085208269,0.35613120733451,0,0.164970122972535,0,0.485561272309963,0.604647113929502,0.188605079755898,0.590603785761546,1.22974059177571,4.13485269069154,4.36240475373007,4.27796854061666,2.52829406348653,3.16255825724996,3.09406629744561,2.04263763452273,3.24109969256358,2.06973894052407,3.21505552547388,1.77340233642274,3.21063871683727,1.97458824722545,2.74018454203139,0,0.21183207086382,0,0.16488625294148,0.484393280087717,0.361877549568935,0.358117032009409,0.328281799490123,0,8.34413859047294,0,0,0.370389054739423,0,0,0,0,0,0.138199973804424,0,2.53068794864908,1.82987520414164,1.18805874903981,1.04544148007234,1.9652630737156,0.809186078308924,0.743881101528023,0.523511883968059,0,2.4853572523477,0,0.747582730219894,1.15820943319968,2.13896307178452,2.84151611651008,1.520605129417,1.29092962510329,0.781226309063701,0.524296722128554,0,0.288030006257865,0,1.21635129174099,0.718976700153791,0.77952493786677,0.716106782669926,0.198681354781265,0,0.147689527174577,0.100966449948148,0.228620419965,0.201652370273681,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0.428736758158132,0,13.5540442228096,10.1271552031579,16.0410743763031,9.6237782112465,12.3314853558716,12.8416962556249,12.8254275044043,10.8077088773813,9.06284817968409,10.8729665467882,0.62272408550506,4.78829848081237,3.58540572083682,2.91728060481953,0.419226325255965,1.10306105070008,2.22246727801615,1.85431551515005,5.77654577265267,2.27427490587418,3.54871019846336,1.69763707247469,2.80924522409647,2.81710670581425,3.38869266838118,1.90517476513229,3.70829843023538,4.24400285020151,1.23625770240992,4.26876868389752,2.05721551431249,1.59728225543404,1.90748951957857,2.61623549938191,3.10560955370591,1.69229215783353,3.29270351170991,2.63069711437843,2.44447404922551,2.24456908663095,2.84724043498018,3.44765688314472,2.45538625901814,2.63392630016142,3.2794123866794,7.99393849401427,1.40358965067245,2.36358159453128,2.10417165275728,1.32354851471709,0.463735671240843 | |phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,1.11514624341466,0.550640256485045,0,1.96222640742402,0.878744730937887,1.55543919259427,1.39986421625363,1.43752564364972,0,0,0,0,0,0,7.28339259094552,8.46385566835253,6.33831403506179,0.338844532069132,0,0,0,0,1.49800055259202,3.45796474789399,4.25127410464758,5.67024940993101,3.99617426567626,12.5686433137674,10.6016899656774,6.00204916153275,6.3258010872036,5.51531271966013,1.10115880999389,8.42736431362239,7.98753972932466,10.1552441552249,12.4423195299277,15.6274011167028,8.65467296904281,7.31591393041184,9.16789486660861,5.30331453852602,6.69146899755784,8.38797506213853,0.37863096666592,0.226714680320357,0,0,0,0,0.649776417447669,0,0.421333260395256,0,0.259786004602869,0.35333957451034,4.08445917352373,1.28326477414318,5.09610479413291,7.11066703153331,0,0,0,0.22836775943812,0.258937883647172,0.148442139064825,1.73485326766136,1.21786191324856,0.461230994512117,0.150722640552623,1.05829836422134,0.251333182659351,0.247194967734374,0.144599356919912,0,0.647067399789637,0,0,0,38.9398460025358,51.7333365829234,0,0,0,0,14.8292733010774,18.3000241127451,19.6020789296068,13.9059456153821,16.6215047264715,11.6361304953354,14.1149898868949,0.81471491080253,0.746441823660558,1.0108910337347,1.47309299120532,1.17108398666433,0.689706313300419,1.62055916824814,1.65775299619287,2.10913147369116,2.0498195245576,3.37326208415024,2.32833033665114,0.646703978798527,3.59301552318857,7.9178005873777,2.19195732427575,5.28289773528636,1.74126083261083,1.23469281844766,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0.36012412292203,0.23674473558521,0.590292695242212,0.154267112887378,0.232533944750408,0.268273401399619,0,0.16455984991348,0.656669856316381,0.405344047729279,0.146199987425332,1.09775057645525,0.134206418760372,12.4071069652835,6.68879980465349,0.330418782983798,0,1.06644125267617,0.232236671860439,0.38660238396628,0.605050573870028,0.667134131534611,0,0,0.329397909448022,0.502670417600539,0.397912944082302,0.38992817423824,0,0,0.199141273254367,0.758671603812327,1.02823661348756,3.38123207019241,0.610953983535943,1.16371492300575,0.420814919341911,0.948548056863859,0.738050739898011,0.156998727841375,0.493588655687202,0,0.667380422864376,0.393117990226406,0.449724224769707,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.369506380333209,1.32643988239339,1.14075483509418,0.509235257325564,0.704070744865506,0.837531287209079,0,0.195133647857799,0.945810864637146,1.7717175171902,1.11618338060241,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,2.75936746304733,7.86697890940181,11.4867452860359,0.327869890753351,1.00988370881749,2.2085575359138,1.56175497718655,3.23135096599198,0.238968797952552,0.891194696329576,0,2.02405350837447,2.04579100537918,2.76701444562566,18.315315036043,0.141940085208269,0.35613120733451,0,0.164970122972535,0,0.485561272309963,0.604647113929502,0.188605079755898,0.590603785761546,1.22974059177571,4.13485269069154,4.36240475373007,4.27796854061666,2.52829406348653,3.16255825724996,3.09406629744561,2.04263763452273,3.24109969256358,2.06973894052407,3.21505552547388,1.77340233642274,3.21063871683727,1.97458824722545,2.74018454203139,0,0.21183207086382,0,0.16488625294148,0.484393280087717,0.361877549568935,0.358117032009409,0.328281799490123,0,8.34413859047294,0,0,0.370389054739423,0,0,0,0,0,0.138199973804424,0,2.53068794864908,1.82987520414164,1.18805874903981,1.04544148007234,1.9652630737156,0.809186078308924,0.743881101528023,0.523511883968059,0,2.4853572523477,0,0.747582730219894,1.15820943319968,2.13896307178452,2.84151611651008,1.520605129417,1.29092962510329,0.781226309063701,0.524296722128554,0,0.288030006257865,0,1.21635129174099,0.718976700153791,0.77952493786677,0.716106782669926,0.198681354781265,0,0.147689527174577,0.100966449948148,0.228620419965,0.201652370273681,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0.428736758158132,0,13.5540442228096,10.1271552031579,16.0410743763031,9.6237782112465,12.3314853558716,12.8416962556249,12.8254275044043,10.8077088773813,9.06284817968409,10.8729665467882,0.62272408550506,4.78829848081237,3.58540572083682,2.91728060481953,0.419226325255965,1.10306105070008,2.22246727801615,1.85431551515005,5.77654577265267,2.27427490587418,3.54871019846336,1.69763707247469,2.80924522409647,2.81710670581425,3.38869266838118,1.90517476513229,3.70829843023538,4.24400285020151,1.23625770240992,4.26876868389752,2.05721551431249,1.59728225543404,1.90748951957857,2.61623549938191,3.10560955370591,1.69229215783353,3.29270351170991,2.63069711437843,2.44447404922551,2.24456908663095,2.84724043498018,3.44765688314472,2.45538625901814,2.63392630016142,3.2794123866794,7.99393849401427,1.40358965067245,2.36358159453128,2.10417165275728,1.32354851471709,0.463735671240843 | ||
|short_description=p3@Kirrel3 | |||
}} | }} |
Latest revision as of 14:00, 26 September 2015
Short description: | p3@Kirrel3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kirrel3_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 56bp_to_NM_001190911, NM_001190912, NM_001190913, NM_001190914, NM_026324_5end |
EntrezGene: | Kirrel3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.53e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.53e-14 | 23 |
neuron | 3.17e-13 | 33 |
neuronal stem cell | 3.17e-13 | 33 |
neuroblast | 3.17e-13 | 33 |
electrically signaling cell | 3.17e-13 | 33 |
ectodermal cell | 6.85e-12 | 44 |
neurectodermal cell | 6.85e-12 | 44 |
neural cell | 1.91e-11 | 43 |
electrically responsive cell | 6.43e-10 | 39 |
electrically active cell | 6.43e-10 | 39 |