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FFCP PHASE1:Mm9::chr9:28211098..28211121,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:28211098..28211121,+
|DHSsupport=NA
|short_description=p2@Opcml
|DPIdataset=NA
|description=CAGE_peak_2_at_Opcml_5end
|association_with_transcript=-260bp_to_ENSMUST00000073822_5end
|EntrezGene=330908
|EntrezGene=330908
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=G5E8G3
|UniProt=G5E8G3
|association_with_transcript=-260bp_to_ENSMUST00000073822_5end
|cluster_id=chr9:28211098..28211121,+
|description=CAGE_peak_2_at_Opcml_5end
|id=chr9:28211098..28211121,+
|ontology_enrichment_celltype=CL:0000117!5.16e-09!23;CL:0000337!5.16e-09!23;CL:0000540!9.64e-07!33;CL:0000047!9.64e-07!33;CL:0000031!9.64e-07!33;CL:0000404!9.64e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.17e-09,23;CL:0000337,2.17e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!4.21e-18!63;UBERON:0001049!1.21e-16!52;UBERON:0005068!1.21e-16!52;UBERON:0006241!1.21e-16!52;UBERON:0007135!1.21e-16!52;UBERON:0001017!1.32e-16!73;UBERON:0005743!1.32e-16!73;UBERON:0000073!3.47e-16!75;UBERON:0001016!3.47e-16!75;UBERON:0000955!5.80e-16!50;UBERON:0006238!5.80e-16!50;UBERON:0002346!1.78e-15!71;UBERON:0003075!1.78e-15!71;UBERON:0007284!1.78e-15!71;UBERON:0002616!2.58e-15!49;UBERON:0003056!1.20e-14!49;UBERON:0002020!3.24e-14!34;UBERON:0004121!4.74e-14!102;UBERON:0000924!4.74e-14!102;UBERON:0006601!4.74e-14!102;UBERON:0007811!1.05e-13!86;UBERON:0000153!3.88e-12!94;UBERON:0003080!4.15e-12!40;UBERON:0002791!1.03e-11!29;UBERON:0003528!1.03e-11!29;UBERON:0001893!1.03e-11!29;UBERON:0002780!1.64e-11!39;UBERON:0001890!1.64e-11!39;UBERON:0006240!1.64e-11!39;UBERON:0002021!1.13e-08!10;UBERON:0000411!1.13e-08!10;UBERON:0001950!1.13e-08!10;UBERON:0000956!1.20e-07!21;UBERON:0001869!1.20e-07!21;UBERON:0000203!1.20e-07!21;UBERON:0002619!7.41e-07!17;UBERON:0000025!7.64e-07!114;UBERON:0000468!8.26e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.44e-21,54;UBERON:0002346,1.60e-20,64;UBERON:0003075,1.60e-20,64;UBERON:0007284,1.60e-20,64;UBERON:0001049,9.54e-20,52;UBERON:0005068,9.54e-20,52;UBERON:0006241,9.54e-20,52;UBERON:0007135,9.54e-20,52;UBERON:0001017,1.02e-17,73;UBERON:0002020,3.89e-17,34;UBERON:0001016,7.55e-17,75;UBERON:0010371,3.49e-16,73;UBERON:0000955,3.81e-16,47;UBERON:0006238,3.81e-16,47;UBERON:0004121,2.25e-15,95;UBERON:0000924,2.25e-15,95;UBERON:0006601,2.25e-15,95;UBERON:0003056,2.47e-15,49;UBERON:0002616,2.95e-15,46;UBERON:0003528,2.02e-13,29;UBERON:0002791,2.02e-13,29;UBERON:0001893,2.02e-13,29;UBERON:0003080,5.33e-13,40;UBERON:0002021,1.13e-12,10;UBERON:0000411,1.13e-12,10;UBERON:0001950,1.13e-12,10;UBERON:0002780,3.58e-12,39;UBERON:0001890,3.58e-12,39;UBERON:0006240,3.58e-12,39;UBERON:0010314,1.24e-10,92;UBERON:0002619,1.17e-08,17;UBERON:0000025,6.02e-08,114;UBERON:0002420,8.07e-08,8;UBERON:0007245,8.07e-08,8;UBERON:0010009,8.07e-08,8;UBERON:0010011,8.07e-08,8;UBERON:0000454,8.07e-08,8;UBERON:0003076,8.14e-08,12;UBERON:0003057,8.14e-08,12;UBERON:0000956,1.37e-07,21;UBERON:0001869,1.37e-07,21;UBERON:0000203,1.37e-07,21
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,2.83243045203437,2.11596391708813,1.90149421051854,0,0,0,0,0,0.599200221036809,0,0.622137673850866,0.675029691658453,0.841299845405528,3.42781181284564,2.42955395046775,0.61245399607477,0.766763768145891,0,9.91042928994498,8.42736431362239,6.60508093001847,2.37395317914349,2.8361169516747,5.73004707612436,4.18774498502071,6.75315132038016,6.87592114995646,5.00868595305235,4.6982654663704,2.60959224155421,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.561777680527007,0,0,0,0.422530259330042,0,0,0,0,0,0,0.68510327831436,0,0,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0.323533699894818,0.662524555381181,0,0,18.737971008739,23.8769245767339,0.255457055208591,0,0,0,12.2828324311955,6.40500843946077,2.51308704225729,25.7259993884569,29.1515621356577,10.1816141834184,12.8170597823529,0.101839363850316,0.124406970610093,0,1.89397670297827,0.520481771850815,0.919608417733892,1.44049703844279,1.50704817835715,2.58538696775046,1.2811372028485,1.12442069471675,1.55222022443409,0.215567992932842,0,0.175951124163949,0.219195732427575,0.556094498451196,0,0.61734640922383,0,0,0,0,0.621377317606506,1.40715635988658,0.540186184383045,0.23674473558521,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0.467061369468678,0.16455984991348,0.656669856316381,0.486412857275134,0.146199987425332,0.219550115291051,0.268412837520744,5.04695876553905,2.26390147234426,0,0,0.213288250535234,0.928946687441754,1.41754207454303,1.4117846723634,0.667134131534611,0.570676878337677,0,1.81168850196412,0.251335208800269,0.994782360205754,0.779856348476481,0,0,0.199141273254367,0,0.228497025219458,1.1270773567308,1.01825663922657,0.193952487167626,0.280543279561274,0.442655759869801,0,0,0,0,0.667380422864376,0,0,0,0.241177159752417,0,0,0.324270453550071,0,0,0.744281895337007,0,0,0,0,0,0.189491411770485,1.62964976442026,4.07388205860452,5.39787571063555,7.70528784232352,5.71304738126433,1.17080188714679,5.67486518782288,4.65075848262427,4.14582398509466,0.163863314715738,0.518054945597687,0,0,0,0,0,9.15138362930414,6.91548950893999,0,0.757412781613119,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0.395287777946524,19.6006003017302,0,0.712262414669021,0.488660878060728,0.164970122972535,0,0.485561272309963,0,0,0,0,0.258428293168221,0,0,0.948110273807448,0,0,0.680879211507576,1.08036656418786,0.129358683782755,0.214337035031592,0.177340233642274,0,0.329098041204242,1.2178597964584,0,0,0,0.16488625294148,0.322928853391811,0.241251699712623,0.238744688006273,0.328281799490123,0.291480836629851,6.86073617438886,0,0.619160603889667,0,0,0,0,0,0,0,0,1.42351197111511,0.406638934253697,0.756037385752609,0.209088296014469,0.218362563746178,0.404593039154462,0.578574190077352,0.523511883968059,0.90730481304255,0,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0,0.117357238645754,0.13020438484395,0.209718688851422,0,0.288030006257865,0,0.202725215290164,2.05421914329655,1.68897069871134,0.716106782669926,0.993406773906324,0.841368146639782,0.295379054349154,0.403865799792591,0.457240839929999,0.705783295957884,0.487289403698762,0.962118416403295,0.935015217452552,0.906921534460845,0,0,0,0,0,0.183151624267265,0.428736758158132,0,58.7341916321749,62.1439069284689,56.1437603170609,86.0984443541875,39.7347861466973,40.0358765616541,30.3760125104313,27.0192721934532,24.469690085147,34.1721805756201,0.207574695168353,0,0.170733605754134,0.972426868273176,1.04806581313991,1.2869045591501,3.11145418922261,1.85431551515005,1.60459604795908,1.51618327058278,2.02783439912192,2.26351609663291,1.03005658216871,1.60062881012173,1.66562859971278,4.28664322154766,1.39061191133827,1.15745532278223,2.06042950401653,1.76638704161277,1.37147700954166,1.06485483695602,1.90748951957857,1.30811774969096,0.658765662907314,2.62305284464197,1.09756783723664,2.63069711437843,1.7654534799962,2.80571135828869,2.01679530811096,2.06859412988683,0.818462086339379,1.08455788830176,0.964533054905707,0.999242311751784,1.63752125911786,1.28922632428979,0.765153328275374,0.441182838239031,0.695603506861264
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,2.83243045203437,2.11596391708813,1.90149421051854,0,0,0,0,0,0.599200221036809,0,0.622137673850866,0.675029691658453,0.841299845405528,3.42781181284564,2.42955395046775,0.61245399607477,0.766763768145891,0,9.91042928994498,8.42736431362239,6.60508093001847,2.37395317914349,2.8361169516747,5.73004707612436,4.18774498502071,6.75315132038016,6.87592114995646,5.00868595305235,4.6982654663704,2.60959224155421,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.561777680527007,0,0,0,0.422530259330042,0,0,0,0,0,0,0.68510327831436,0,0,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0.323533699894818,0.662524555381181,0,0,18.737971008739,23.8769245767339,0.255457055208591,0,0,0,12.2828324311955,6.40500843946077,2.51308704225729,25.7259993884569,29.1515621356577,10.1816141834184,12.8170597823529,0.101839363850316,0.124406970610093,0,1.89397670297827,0.520481771850815,0.919608417733892,1.44049703844279,1.50704817835715,2.58538696775046,1.2811372028485,1.12442069471675,1.55222022443409,0.215567992932842,0,0.175951124163949,0.219195732427575,0.556094498451196,0,0.61734640922383,0,0,0,0,0.621377317606506,1.40715635988658,0.540186184383045,0.23674473558521,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0.467061369468678,0.16455984991348,0.656669856316381,0.486412857275134,0.146199987425332,0.219550115291051,0.268412837520744,5.04695876553905,2.26390147234426,0,0,0.213288250535234,0.928946687441754,1.41754207454303,1.4117846723634,0.667134131534611,0.570676878337677,0,1.81168850196412,0.251335208800269,0.994782360205754,0.779856348476481,0,0,0.199141273254367,0,0.228497025219458,1.1270773567308,1.01825663922657,0.193952487167626,0.280543279561274,0.442655759869801,0,0,0,0,0.667380422864376,0,0,0,0.241177159752417,0,0,0.324270453550071,0,0,0.744281895337007,0,0,0,0,0,0.189491411770485,1.62964976442026,4.07388205860452,5.39787571063555,7.70528784232352,5.71304738126433,1.17080188714679,5.67486518782288,4.65075848262427,4.14582398509466,0.163863314715738,0.518054945597687,0,0,0,0,0,9.15138362930414,6.91548950893999,0,0.757412781613119,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0.395287777946524,19.6006003017302,0,0.712262414669021,0.488660878060728,0.164970122972535,0,0.485561272309963,0,0,0,0,0.258428293168221,0,0,0.948110273807448,0,0,0.680879211507576,1.08036656418786,0.129358683782755,0.214337035031592,0.177340233642274,0,0.329098041204242,1.2178597964584,0,0,0,0.16488625294148,0.322928853391811,0.241251699712623,0.238744688006273,0.328281799490123,0.291480836629851,6.86073617438886,0,0.619160603889667,0,0,0,0,0,0,0,0,1.42351197111511,0.406638934253697,0.756037385752609,0.209088296014469,0.218362563746178,0.404593039154462,0.578574190077352,0.523511883968059,0.90730481304255,0,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0,0.117357238645754,0.13020438484395,0.209718688851422,0,0.288030006257865,0,0.202725215290164,2.05421914329655,1.68897069871134,0.716106782669926,0.993406773906324,0.841368146639782,0.295379054349154,0.403865799792591,0.457240839929999,0.705783295957884,0.487289403698762,0.962118416403295,0.935015217452552,0.906921534460845,0,0,0,0,0,0.183151624267265,0.428736758158132,0,58.7341916321749,62.1439069284689,56.1437603170609,86.0984443541875,39.7347861466973,40.0358765616541,30.3760125104313,27.0192721934532,24.469690085147,34.1721805756201,0.207574695168353,0,0.170733605754134,0.972426868273176,1.04806581313991,1.2869045591501,3.11145418922261,1.85431551515005,1.60459604795908,1.51618327058278,2.02783439912192,2.26351609663291,1.03005658216871,1.60062881012173,1.66562859971278,4.28664322154766,1.39061191133827,1.15745532278223,2.06042950401653,1.76638704161277,1.37147700954166,1.06485483695602,1.90748951957857,1.30811774969096,0.658765662907314,2.62305284464197,1.09756783723664,2.63069711437843,1.7654534799962,2.80571135828869,2.01679530811096,2.06859412988683,0.818462086339379,1.08455788830176,0.964533054905707,0.999242311751784,1.63752125911786,1.28922632428979,0.765153328275374,0.441182838239031,0.695603506861264
|short_description=p2@Opcml
}}
}}

Latest revision as of 12:38, 26 September 2015

Short description:p2@Opcml
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Opcml_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -260bp_to_ENSMUST00000073822_5end
EntrezGene:Opcml
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Opcml

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.88
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B218.74
cerebellum, neonate N30.CNhs11135.1395-42I223.88
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A412.28
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D525.73
cortex, neonate N30.CNhs11107.1392-42F229.15
diencephalon, adult.CNhs10482.20-12F210.18
diencephalon, neonate N30.CNhs11201.1388-42B212.82
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C62.59
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C54.07
lung, embryo E16.CNhs10998.458-17B65.40
lung, embryo E17.CNhs10605.480-44A67.71
lung, embryo E18.CNhs10583.1287-20I65.71
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E55.67
lung, neonate N07.CNhs11111.715-19A34.65
lung, neonate N10.CNhs11219.750-23E64.15
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C29.15
medulla oblongata, neonate N30.CNhs11200.1396-42A36.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I919.60
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C96.86
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I22.05
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A158.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A262.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A356.14
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D786.10
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A439.73
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A540.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A630.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.02
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.47
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A934.17
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.17e-0923
neuroblast (sensu Vertebrata)2.17e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.44e-2154
neurectoderm1.60e-2064
neural plate1.60e-2064
presumptive neural plate1.60e-2064
neural tube9.54e-2052
neural rod9.54e-2052
future spinal cord9.54e-2052
neural keel9.54e-2052
central nervous system1.02e-1773
gray matter3.89e-1734
nervous system7.55e-1775
ecto-epithelium3.49e-1673
brain3.81e-1647
future brain3.81e-1647
ectoderm-derived structure2.25e-1595
ectoderm2.25e-1595
presumptive ectoderm2.25e-1595
pre-chordal neural plate2.47e-1549
regional part of brain2.95e-1546
brain grey matter2.02e-1329
regional part of telencephalon2.02e-1329
telencephalon2.02e-1329
anterior neural tube5.33e-1340
occipital lobe1.13e-1210
visual cortex1.13e-1210
neocortex1.13e-1210
regional part of forebrain3.58e-1239
forebrain3.58e-1239
future forebrain3.58e-1239
structure with developmental contribution from neural crest1.24e-1092
regional part of cerebral cortex1.17e-0817
tube6.02e-08114
basal ganglion8.07e-088
nuclear complex of neuraxis8.07e-088
aggregate regional part of brain8.07e-088
collection of basal ganglia8.07e-088
cerebral subcortex8.07e-088
posterior neural tube8.14e-0812
chordal neural plate8.14e-0812
cerebral cortex1.37e-0721
cerebral hemisphere1.37e-0721
pallium1.37e-0721
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