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FFCP PHASE1:Mm9::chr8:69221343..69221360,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:69221343..69221360,+
|DHSsupport=NA
|short_description=p1@Npy1r
|DPIdataset=NA
|description=CAGE_peak_1_at_Npy1r_5end
|association_with_transcript=22bp_to_ENSMUST00000039303,NM_010934,uc009lvt.2,uc012gej.1_5end
|EntrezGene=18166
|EntrezGene=18166
|HGNC=
|HGNC=
|MCL_coexpression_id=98
|TSSclassifier=NA
|UniProt=Q04573,Q3V1K5
|UniProt=Q04573,Q3V1K5
|association_with_transcript=22bp_to_ENSMUST00000039303,NM_010934,uc009lvt.2,uc012gej.1_5end
|cluster_id=chr8:69221343..69221360,+
|description=CAGE_peak_1_at_Npy1r_5end
|id=chr8:69221343..69221360,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!8.29e-13!52;UBERON:0005068!8.29e-13!52;UBERON:0006241!8.29e-13!52;UBERON:0007135!8.29e-13!52;UBERON:0000033!1.17e-12!63;UBERON:0000955!1.40e-12!50;UBERON:0006238!1.40e-12!50;UBERON:0002616!4.52e-12!49;UBERON:0002346!6.98e-12!71;UBERON:0003075!6.98e-12!71;UBERON:0007284!6.98e-12!71;UBERON:0003056!5.51e-11!49;UBERON:0003080!5.25e-10!40;UBERON:0004111!9.68e-10!122;UBERON:0002780!1.74e-09!39;UBERON:0001890!1.74e-09!39;UBERON:0006240!1.74e-09!39;UBERON:0004121!1.85e-09!102;UBERON:0000924!1.85e-09!102;UBERON:0006601!1.85e-09!102;UBERON:0001017!3.38e-09!73;UBERON:0005743!3.38e-09!73;UBERON:0000025!4.94e-09!114;UBERON:0000073!5.42e-09!75;UBERON:0001016!5.42e-09!75;UBERON:0002020!8.75e-09!34;UBERON:0002021!5.91e-08!10;UBERON:0000411!5.91e-08!10;UBERON:0001950!5.91e-08!10;UBERON:0002791!2.34e-07!29;UBERON:0003528!2.34e-07!29;UBERON:0001893!2.34e-07!29;UBERON:0007023!6.65e-07!51
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.66e-15,54;UBERON:0002346,2.43e-14,64;UBERON:0003075,2.43e-14,64;UBERON:0007284,2.43e-14,64;UBERON:0010371,4.34e-14,73;UBERON:0001049,5.79e-14,52;UBERON:0005068,5.79e-14,52;UBERON:0006241,5.79e-14,52;UBERON:0007135,5.79e-14,52;UBERON:0002021,1.03e-13,10;UBERON:0000411,1.03e-13,10;UBERON:0001950,1.03e-13,10;UBERON:0003056,1.63e-13,49;UBERON:0000955,1.29e-12,47;UBERON:0006238,1.29e-12,47;UBERON:0004111,2.78e-12,122;UBERON:0000025,3.04e-12,114;UBERON:0003080,4.41e-12,40;UBERON:0002616,7.87e-12,46;UBERON:0004121,1.69e-11,95;UBERON:0000924,1.69e-11,95;UBERON:0006601,1.69e-11,95;UBERON:0002780,3.14e-11,39;UBERON:0001890,3.14e-11,39;UBERON:0006240,3.14e-11,39;UBERON:0002020,3.26e-11,34;UBERON:0001017,9.59e-11,73;UBERON:0002619,3.00e-10,17;UBERON:0001016,3.31e-10,75;UBERON:0003528,5.40e-10,29;UBERON:0002791,5.40e-10,29;UBERON:0001893,5.40e-10,29;UBERON:0010314,1.19e-09,92;UBERON:0000956,3.16e-09,21;UBERON:0001869,3.16e-09,21;UBERON:0000203,3.16e-09,21;UBERON:0007023,3.26e-08,51;UBERON:0000055,1.27e-07,5;UBERON:0007500,1.27e-07,5;UBERON:0001981,1.27e-07,5;UBERON:0002049,1.27e-07,5;UBERON:0007798,1.27e-07,5;UBERON:0004537,1.27e-07,5;UBERON:0006965,1.27e-07,5;UBERON:0000947,4.80e-07,4;UBERON:0001637,4.80e-07,4;UBERON:0004573,4.80e-07,4;UBERON:0003509,4.80e-07,4;UBERON:0004571,4.80e-07,4;UBERON:0010191,4.80e-07,4;UBERON:0004572,4.80e-07,4;UBERON:0000483,5.90e-07,174
|phase1_expression=0.480446541314382,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,199.54645649129,161.290697570248,41.1144724842167,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0.725827286159344,0.675029691658453,0.210324961351382,0.285650984403804,1.10434270475807,0.61245399607477,0.383381884072945,0,1.10115880999389,2.68143409978894,1.68967186581868,0.395658863190582,0.274462930807229,0,0.279182999001381,1.12552522006336,1.98637722109853,2.35702868378934,2.98980529678116,0.745597783301202,0.075726193333184,0.302286240427142,1.15945795480671,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,0,0,0,0,0.216491041011214,0,0,1.02765491747154,3.88406825470758,0.593768556259299,0,0.304465478312141,0,0,0.117588707135705,0.251333182659351,0.494389935468748,6.94076913215576,0,0.485300549842228,0.220841518460394,0.484875253135222,1.86391761218122,0.292780797011547,2.09446706813455,0.255457055208591,0,0,0,3.44518470631092,4.57500602818627,1.38219787324151,7.30062144807561,5.37002460393694,3.74018480207208,4.70499662896497,0.101839363850316,0.622034853050465,0.758168275301024,1.47309299120532,0.130120442962704,0,1.26043490863744,1.05493372485001,1.15662048557257,0.384341160854549,0.374806898238915,1.81092359517311,0,0,0,0.219195732427575,0.278047249225598,0.696504333044333,1.02891068203972,0,0,0,0,0,0,0,0.23674473558521,0.393528463494808,1.3884040159864,0.697601834251224,1.60964040839772,0.583826711835847,0.822799249567402,0.656669856316381,1.05389452409612,0.584799949701329,0.878200461164203,1.07365135008297,6.9395683026162,3.19004298375782,0,0.264450566663544,1.06644125267617,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0,1.16978452271472,0,0.648414149624083,0.597423819763102,0.189667900953082,0.228497025219458,1.1270773567308,0.203651327845314,0,0,0.379419222745544,3.24742325555125,3.45397201251025,3.45512058981041,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0.482443521363367,3.14080423283228,0.568474235311454,0.488894929326078,0,0.469380496577004,0.167506257441816,0.238043640886014,0,1.89162172927429,1.7717175171902,1.91345722388985,4.58817281204066,2.93564469172023,1.3018415272336,0,0,0.983528546038072,1.65562047782839,0.963303539926752,2.10981035865966,0,0.504941854408746,0.315508219416257,0.780877488593277,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0,2.57057053137446,0.709700426041343,0.178065603667255,0,1.64970122972535,1.32745138339963,0,0,0,0,0,0.258428293168221,0.727067458955011,0.712994756769443,0,1.05418608574999,0,1.02131881726136,0.36012218806262,0.258717367565509,0.214337035031592,0.532020700926821,1.96205699362278,1.15184314421485,0.913394847343798,0,0,0.441056796109924,1.15420377059036,1.29171541356724,0.361877549568935,0,0.328281799490123,0.582961673259701,2.78137953015765,1.02522528478712,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,0,0.216010681643603,0.418176592028937,0.218362563746178,0.809186078308924,0.330613822901344,0.523511883968059,0.90730481304255,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.129159823477731,0.337912250981556,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0.405450430580328,0.102710957164827,0.25984164595559,0,0.198681354781265,0.240390899039938,0.147689527174577,0.201932899896295,0,0,0.194915761479505,0.0962118416403295,0.233753804363138,0.680191150845634,0,0,0,11.3981860478992,1.31377732815827,0.73260649706906,0.643105137237198,1.50471631210609,2.25900737046827,4.60325236507177,4.58316410751517,6.8741272937475,6.16574267793578,5.2877572817279,6.07520250208625,7.20513925158753,5.89085131679466,5.69536342927002,0.207574695168353,0.798049746802062,0.682934423016537,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0,0.320919209591815,0,0.25347929989024,0.754505365544305,0.655490552289177,0.384150914429216,0.631790158511746,0.476293691283074,0.347652977834566,0,0.824171801606613,0.588795680537589,0.685738504770831,0.354951612318675,0,0.726732083161643,0.752875043322645,0.507687647350059,0.914639864363863,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.29551344712669,0.409231043169689,0.464810523557898,0.578719832943424,0.249810577937946,0.701794825336225,1.07435527024149,1.3390183244819,0.661774257358546,0.231867835620421
|phase1_expression=0.480446541314382,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,199.54645649129,161.290697570248,41.1144724842167,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0.725827286159344,0.675029691658453,0.210324961351382,0.285650984403804,1.10434270475807,0.61245399607477,0.383381884072945,0,1.10115880999389,2.68143409978894,1.68967186581868,0.395658863190582,0.274462930807229,0,0.279182999001381,1.12552522006336,1.98637722109853,2.35702868378934,2.98980529678116,0.745597783301202,0.075726193333184,0.302286240427142,1.15945795480671,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,0,0,0,0,0.216491041011214,0,0,1.02765491747154,3.88406825470758,0.593768556259299,0,0.304465478312141,0,0,0.117588707135705,0.251333182659351,0.494389935468748,6.94076913215576,0,0.485300549842228,0.220841518460394,0.484875253135222,1.86391761218122,0.292780797011547,2.09446706813455,0.255457055208591,0,0,0,3.44518470631092,4.57500602818627,1.38219787324151,7.30062144807561,5.37002460393694,3.74018480207208,4.70499662896497,0.101839363850316,0.622034853050465,0.758168275301024,1.47309299120532,0.130120442962704,0,1.26043490863744,1.05493372485001,1.15662048557257,0.384341160854549,0.374806898238915,1.81092359517311,0,0,0,0.219195732427575,0.278047249225598,0.696504333044333,1.02891068203972,0,0,0,0,0,0,0,0.23674473558521,0.393528463494808,1.3884040159864,0.697601834251224,1.60964040839772,0.583826711835847,0.822799249567402,0.656669856316381,1.05389452409612,0.584799949701329,0.878200461164203,1.07365135008297,6.9395683026162,3.19004298375782,0,0.264450566663544,1.06644125267617,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0,1.16978452271472,0,0.648414149624083,0.597423819763102,0.189667900953082,0.228497025219458,1.1270773567308,0.203651327845314,0,0,0.379419222745544,3.24742325555125,3.45397201251025,3.45512058981041,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0.482443521363367,3.14080423283228,0.568474235311454,0.488894929326078,0,0.469380496577004,0.167506257441816,0.238043640886014,0,1.89162172927429,1.7717175171902,1.91345722388985,4.58817281204066,2.93564469172023,1.3018415272336,0,0,0.983528546038072,1.65562047782839,0.963303539926752,2.10981035865966,0,0.504941854408746,0.315508219416257,0.780877488593277,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0,2.57057053137446,0.709700426041343,0.178065603667255,0,1.64970122972535,1.32745138339963,0,0,0,0,0,0.258428293168221,0.727067458955011,0.712994756769443,0,1.05418608574999,0,1.02131881726136,0.36012218806262,0.258717367565509,0.214337035031592,0.532020700926821,1.96205699362278,1.15184314421485,0.913394847343798,0,0,0.441056796109924,1.15420377059036,1.29171541356724,0.361877549568935,0,0.328281799490123,0.582961673259701,2.78137953015765,1.02522528478712,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,0,0.216010681643603,0.418176592028937,0.218362563746178,0.809186078308924,0.330613822901344,0.523511883968059,0.90730481304255,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.129159823477731,0.337912250981556,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0.405450430580328,0.102710957164827,0.25984164595559,0,0.198681354781265,0.240390899039938,0.147689527174577,0.201932899896295,0,0,0.194915761479505,0.0962118416403295,0.233753804363138,0.680191150845634,0,0,0,11.3981860478992,1.31377732815827,0.73260649706906,0.643105137237198,1.50471631210609,2.25900737046827,4.60325236507177,4.58316410751517,6.8741272937475,6.16574267793578,5.2877572817279,6.07520250208625,7.20513925158753,5.89085131679466,5.69536342927002,0.207574695168353,0.798049746802062,0.682934423016537,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0,0.320919209591815,0,0.25347929989024,0.754505365544305,0.655490552289177,0.384150914429216,0.631790158511746,0.476293691283074,0.347652977834566,0,0.824171801606613,0.588795680537589,0.685738504770831,0.354951612318675,0,0.726732083161643,0.752875043322645,0.507687647350059,0.914639864363863,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.29551344712669,0.409231043169689,0.464810523557898,0.578719832943424,0.249810577937946,0.701794825336225,1.07435527024149,1.3390183244819,0.661774257358546,0.231867835620421
|short_description=p1@Npy1r
}}
}}

Latest revision as of 16:27, 25 September 2015

Short description:p1@Npy1r
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Npy1r_5end
Coexpression cluster:MCL_coexpression_mm9:98
Association with transcript: 22bp_to_ENSMUST00000039303, NM_010934, uc009lvt.2, uc012gej.1_5end
EntrezGene:Npy1r
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Npy1r

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8199.55
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9161.29
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B341.11
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H16.94
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.45
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D57.30
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E86.94
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F33.45
kidney, neonate N30.CNhs11203.1385-42H13.46
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B13.14
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A44.59
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E411.40
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.66e-1554
neurectoderm2.43e-1464
neural plate2.43e-1464
presumptive neural plate2.43e-1464
ecto-epithelium4.34e-1473
neural tube5.79e-1452
neural rod5.79e-1452
future spinal cord5.79e-1452
neural keel5.79e-1452
occipital lobe1.03e-1310
visual cortex1.03e-1310
neocortex1.03e-1310
pre-chordal neural plate1.63e-1349
brain1.29e-1247
future brain1.29e-1247
anatomical conduit2.78e-12122
tube3.04e-12114
anterior neural tube4.41e-1240
regional part of brain7.87e-1246
ectoderm-derived structure1.69e-1195
ectoderm1.69e-1195
presumptive ectoderm1.69e-1195
regional part of forebrain3.14e-1139
forebrain3.14e-1139
future forebrain3.14e-1139
gray matter3.26e-1134
central nervous system9.59e-1173
regional part of cerebral cortex3.00e-1017
nervous system3.31e-1075
brain grey matter5.40e-1029
regional part of telencephalon5.40e-1029
telencephalon5.40e-1029
structure with developmental contribution from neural crest1.19e-0992
cerebral cortex3.16e-0921
cerebral hemisphere3.16e-0921
pallium3.16e-0921
adult organism3.26e-0851
vessel1.27e-075
epithelial tube open at both ends1.27e-075
blood vessel1.27e-075
vasculature1.27e-075
vascular system1.27e-075
blood vasculature1.27e-075
vascular cord1.27e-075
aorta4.80e-074
artery4.80e-074
systemic artery4.80e-074
arterial blood vessel4.80e-074
systemic arterial system4.80e-074
aortic system4.80e-074
arterial system4.80e-074
epithelium5.90e-07174
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