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FFCP PHASE1:Mm9::chr8:63433589..63433600,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:63433589..63433600,-
|DHSsupport=NA
|short_description=p3@Clcn3
|DPIdataset=NA
|description=CAGE_peak_3_at_Clcn3_5end
|association_with_transcript=0bp_to_NM_173876,uc009ltk.2,uc009lto.2_5end
|EntrezGene=12725
|EntrezGene=12725
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8K4W8
|UniProt=Q8K4W8
|association_with_transcript=0bp_to_NM_173876,uc009ltk.2,uc009lto.2_5end
|cluster_id=chr8:63433589..63433600,-
|description=CAGE_peak_3_at_Clcn3_5end
|id=chr8:63433589..63433600,-
|ontology_enrichment_celltype=CL:0000117!9.70e-10!23;CL:0000337!9.70e-10!23;CL:0000540!1.03e-07!33;CL:0000047!1.03e-07!33;CL:0000031!1.03e-07!33;CL:0000404!1.03e-07!33;CL:0000393!9.36e-07!39;CL:0000211!9.36e-07!39
|ontology_enrichment_celltype_v019_2=CL:0002610,8.16e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.05e-24!71;UBERON:0003075!3.05e-24!71;UBERON:0007284!3.05e-24!71;UBERON:0000033!1.37e-21!63;UBERON:0001049!5.84e-20!52;UBERON:0005068!5.84e-20!52;UBERON:0006241!5.84e-20!52;UBERON:0007135!5.84e-20!52;UBERON:0004121!1.91e-19!102;UBERON:0000924!1.91e-19!102;UBERON:0006601!1.91e-19!102;UBERON:0000955!2.84e-19!50;UBERON:0006238!2.84e-19!50;UBERON:0000073!9.15e-19!75;UBERON:0001016!9.15e-19!75;UBERON:0001017!1.09e-18!73;UBERON:0005743!1.09e-18!73;UBERON:0002616!1.61e-18!49;UBERON:0002020!1.35e-17!34;UBERON:0003056!3.05e-17!49;UBERON:0002791!6.92e-15!29;UBERON:0003528!6.92e-15!29;UBERON:0001893!6.92e-15!29;UBERON:0003080!4.35e-14!40;UBERON:0000025!1.22e-13!114;UBERON:0002780!1.94e-13!39;UBERON:0001890!1.94e-13!39;UBERON:0006240!1.94e-13!39;UBERON:0004111!1.33e-12!122;UBERON:0000956!2.76e-10!21;UBERON:0001869!2.76e-10!21;UBERON:0000203!2.76e-10!21;UBERON:0007811!6.96e-10!86;UBERON:0002619!2.94e-08!17;UBERON:0000153!1.09e-07!94;UBERON:0002021!1.76e-07!10;UBERON:0000411!1.76e-07!10;UBERON:0001950!1.76e-07!10;UBERON:0000477!4.82e-07!154
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.83e-29,54;UBERON:0002346,6.88e-27,64;UBERON:0003075,6.88e-27,64;UBERON:0007284,6.88e-27,64;UBERON:0001049,3.59e-26,52;UBERON:0005068,3.59e-26,52;UBERON:0006241,3.59e-26,52;UBERON:0007135,3.59e-26,52;UBERON:0000955,2.32e-23,47;UBERON:0006238,2.32e-23,47;UBERON:0001017,5.39e-23,73;UBERON:0010371,1.47e-22,73;UBERON:0001016,3.68e-22,75;UBERON:0002616,8.26e-22,46;UBERON:0004121,4.24e-21,95;UBERON:0000924,4.24e-21,95;UBERON:0006601,4.24e-21,95;UBERON:0002020,1.23e-20,34;UBERON:0003056,1.61e-19,49;UBERON:0003528,5.02e-18,29;UBERON:0002791,5.02e-18,29;UBERON:0001893,5.02e-18,29;UBERON:0003080,3.11e-17,40;UBERON:0010314,3.30e-16,92;UBERON:0002780,6.67e-16,39;UBERON:0001890,6.67e-16,39;UBERON:0006240,6.67e-16,39;UBERON:0002021,1.66e-14,10;UBERON:0000411,1.66e-14,10;UBERON:0001950,1.66e-14,10;UBERON:0002619,4.90e-12,17;UBERON:0000956,2.39e-11,21;UBERON:0001869,2.39e-11,21;UBERON:0000203,2.39e-11,21;UBERON:0003076,9.28e-10,12;UBERON:0003057,9.28e-10,12;UBERON:0000025,1.49e-09,114;UBERON:0004111,1.93e-08,122;UBERON:0002950,3.24e-08,4;UBERON:0001891,3.24e-08,4;UBERON:0009616,3.24e-08,4;UBERON:0010286,3.24e-08,4;UBERON:0002420,3.50e-08,8;UBERON:0007245,3.50e-08,8;UBERON:0010009,3.50e-08,8;UBERON:0010011,3.50e-08,8;UBERON:0000454,3.50e-08,8;UBERON:0004684,8.16e-07,3;UBERON:0002275,8.16e-07,3
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.61980213911861,2.09868563438444,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0,0,0.65407546914134,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.725827286159344,0.945041568321835,0.841299845405528,0.571301968807607,0.883474163806454,0.857435594504678,0.287536413054709,0,2.20231761998777,2.68143409978894,2.15049146558741,0.791317726381163,0.731901148819277,1.56274011167028,1.67509799400829,1.68828783009504,2.44477196442896,1.47314292736834,2.70506193518296,1.3047961207771,0.075726193333184,0.302286240427142,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0,0.445326417194474,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0,0,0,0.161766849947409,0,0,0,2.34224637609238,4.81727425670947,0,0,0,0,2.24685959107234,3.20250421973039,1.00523481690292,3.47648640384553,4.85859368927628,3.1168206683934,3.24482526135515,0.203678727700633,0.248813941220186,0,0.210441855886474,0.390361328888111,0.229902104433473,0.540186389416048,0.30140963567143,1.08858398642125,1.40925092313335,1.49922759295566,3.88055056108524,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.828503090142008,0,0.900310307305074,0.473489471170421,0.196764231747404,0.462801338662135,0,0.268273401399619,0.700592054203017,0.16455984991348,0.32833492815819,0.243206428637567,0.584799949701329,0.439100230582101,0.402619256281115,2.73376933133365,2.26390147234426,0.330418782983798,0,0,0,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0.83422552858047,0.982794975566015,0.449724224769707,1.21716072833102,1.20588579876208,0.25462585178142,0.575392274901621,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0.238043640886014,0.585400943573396,0.630540576424764,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0,2.40825884981688,2.10981035865966,0.163934945376675,0.252470927204373,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0.283076530788832,0.809621403349789,0,0,2.89189184779626,0.283880170416537,0,0.325773918707152,0.329940245945071,1.32745138339963,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0,0,0,0.329098041204242,0,0,0,0,0.16488625294148,0,0,0,0,0,2.78137953015765,1.70870880797853,0,0.185194527369712,0.753473828018764,0.683471138605126,2.0590035588587,0,0,0,0,0,0.203319467126849,0,0,0,0,0.330613822901344,0.26175594198403,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0,2.82375921308533,1.38097570952153,1.71868654031819,1.3748254587495,2.05524755931193,1.5107877947794,0.675022500231806,4.5032120322422,4.07828168085784,1.03552062350364,0.207574695168353,0,0.682934423016537,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0.64183841918363,0,0.25347929989024,0,0.468207537349412,0.128050304809739,0.229741875822453,0.952587382566147,0.115884325944855,0,0,0.147198920134397,0.685738504770831,0,0.238436189947321,0.872078499793971,0.188218760830661,0.423073039458382,0.182927972872773,0,0.407412341537585,0,0.237270036248348,0.591026894253381,0,0.309873682371932,0.771626443924566,0.499621155875892,0.233931608445408,1.07435527024149,0.191288332068843,0.882365676478062,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.61980213911861,2.09868563438444,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0,0,0.65407546914134,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.725827286159344,0.945041568321835,0.841299845405528,0.571301968807607,0.883474163806454,0.857435594504678,0.287536413054709,0,2.20231761998777,2.68143409978894,2.15049146558741,0.791317726381163,0.731901148819277,1.56274011167028,1.67509799400829,1.68828783009504,2.44477196442896,1.47314292736834,2.70506193518296,1.3047961207771,0.075726193333184,0.302286240427142,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0,0.445326417194474,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0,0,0,0.161766849947409,0,0,0,2.34224637609238,4.81727425670947,0,0,0,0,2.24685959107234,3.20250421973039,1.00523481690292,3.47648640384553,4.85859368927628,3.1168206683934,3.24482526135515,0.203678727700633,0.248813941220186,0,0.210441855886474,0.390361328888111,0.229902104433473,0.540186389416048,0.30140963567143,1.08858398642125,1.40925092313335,1.49922759295566,3.88055056108524,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.828503090142008,0,0.900310307305074,0.473489471170421,0.196764231747404,0.462801338662135,0,0.268273401399619,0.700592054203017,0.16455984991348,0.32833492815819,0.243206428637567,0.584799949701329,0.439100230582101,0.402619256281115,2.73376933133365,2.26390147234426,0.330418782983798,0,0,0,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0.83422552858047,0.982794975566015,0.449724224769707,1.21716072833102,1.20588579876208,0.25462585178142,0.575392274901621,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0.238043640886014,0.585400943573396,0.630540576424764,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0,2.40825884981688,2.10981035865966,0.163934945376675,0.252470927204373,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0.283076530788832,0.809621403349789,0,0,2.89189184779626,0.283880170416537,0,0.325773918707152,0.329940245945071,1.32745138339963,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0,0,0,0.329098041204242,0,0,0,0,0.16488625294148,0,0,0,0,0,2.78137953015765,1.70870880797853,0,0.185194527369712,0.753473828018764,0.683471138605126,2.0590035588587,0,0,0,0,0,0.203319467126849,0,0,0,0,0.330613822901344,0.26175594198403,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0,2.82375921308533,1.38097570952153,1.71868654031819,1.3748254587495,2.05524755931193,1.5107877947794,0.675022500231806,4.5032120322422,4.07828168085784,1.03552062350364,0.207574695168353,0,0.682934423016537,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0.64183841918363,0,0.25347929989024,0,0.468207537349412,0.128050304809739,0.229741875822453,0.952587382566147,0.115884325944855,0,0,0.147198920134397,0.685738504770831,0,0.238436189947321,0.872078499793971,0.188218760830661,0.423073039458382,0.182927972872773,0,0.407412341537585,0,0.237270036248348,0.591026894253381,0,0.309873682371932,0.771626443924566,0.499621155875892,0.233931608445408,1.07435527024149,0.191288332068843,0.882365676478062,0
|short_description=p3@Clcn3
}}
}}

Latest revision as of 15:49, 25 September 2015

Short description:p3@Clcn3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Clcn3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_NM_173876, uc009ltk.2, uc009lto.2_5end
EntrezGene:Clcn3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Clcn3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B23.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron8.16e-073

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.83e-2954
neurectoderm6.88e-2764
neural plate6.88e-2764
presumptive neural plate6.88e-2764
neural tube3.59e-2652
neural rod3.59e-2652
future spinal cord3.59e-2652
neural keel3.59e-2652
brain2.32e-2347
future brain2.32e-2347
central nervous system5.39e-2373
ecto-epithelium1.47e-2273
nervous system3.68e-2275
regional part of brain8.26e-2246
ectoderm-derived structure4.24e-2195
ectoderm4.24e-2195
presumptive ectoderm4.24e-2195
gray matter1.23e-2034
pre-chordal neural plate1.61e-1949
brain grey matter5.02e-1829
regional part of telencephalon5.02e-1829
telencephalon5.02e-1829
anterior neural tube3.11e-1740
structure with developmental contribution from neural crest3.30e-1692
regional part of forebrain6.67e-1639
forebrain6.67e-1639
future forebrain6.67e-1639
occipital lobe1.66e-1410
visual cortex1.66e-1410
neocortex1.66e-1410
regional part of cerebral cortex4.90e-1217
cerebral cortex2.39e-1121
cerebral hemisphere2.39e-1121
pallium2.39e-1121
posterior neural tube9.28e-1012
chordal neural plate9.28e-1012
tube1.49e-09114
anatomical conduit1.93e-08122
regional part of midbrain3.24e-084
midbrain3.24e-084
presumptive midbrain3.24e-084
midbrain neural tube3.24e-084
basal ganglion3.50e-088
nuclear complex of neuraxis3.50e-088
aggregate regional part of brain3.50e-088
collection of basal ganglia3.50e-088
cerebral subcortex3.50e-088
raphe nuclei8.16e-073
reticular formation8.16e-073
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