FFCP PHASE1:Mm9::chr8:23587281..23587345,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr8:23587281..23587345,- to FFCP PHASE1:Mm9::chr8:23587281..23587345,-: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=102032 | |EntrezGene=102032 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q80ZU4,E9PUT6 | |UniProt=Q80ZU4,E9PUT6 | ||
|association_with_transcript=5bp_to_ENSMUST00000033935,ENSMUST00000163774,NM_001012667,NM_001146117,uc009ldd.2,uc009lde.2_5end | |||
|cluster_id=chr8:23587281..23587345,- | |||
|description=CAGE_peak_1_at_AI316807_5end | |||
|id=chr8:23587281..23587345,- | |||
|ontology_enrichment_celltype=CL:0000055!8.87e-18!50;CL:0000221!8.94e-17!44;CL:0000133!8.94e-17!44;CL:0002319!1.48e-16!43;CL:0000393!6.91e-14!39;CL:0000211!6.91e-14!39;CL:0000540!4.14e-12!33;CL:0000047!4.14e-12!33;CL:0000031!4.14e-12!33;CL:0000404!4.14e-12!33;CL:0000117!6.44e-11!23;CL:0000337!6.44e-11!23;CL:0002321!1.37e-07!70;CL:0000220!1.37e-07!70;CL:0000723!9.09e-07!91;CL:0000048!9.09e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,8.94e-17,44;CL:0000133,8.94e-17,44;CL:0002319,1.48e-16,43;CL:0000393,6.91e-14,39;CL:0000211,6.91e-14,39;CL:0000540,4.14e-12,33;CL:0000047,4.14e-12,33;CL:0000031,4.14e-12,33;CL:0000404,4.14e-12,33;CL:0000117,6.44e-11,23;CL:0000337,6.44e-11,23;CL:0002321,1.37e-07,70;CL:0000723,9.09e-07,91;CL:0000048,9.09e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.32e-18!75;UBERON:0001016!7.32e-18!75;UBERON:0001017!1.31e-17!73;UBERON:0005743!1.31e-17!73;UBERON:0004121!1.45e-14!102;UBERON:0000924!1.45e-14!102;UBERON:0006601!1.45e-14!102;UBERON:0001049!4.87e-11!52;UBERON:0005068!4.87e-11!52;UBERON:0006241!4.87e-11!52;UBERON:0007135!4.87e-11!52;UBERON:0002616!3.34e-10!49;UBERON:0000033!3.35e-10!63;UBERON:0000955!9.45e-10!50;UBERON:0006238!9.45e-10!50;UBERON:0002346!2.04e-09!71;UBERON:0003075!2.04e-09!71;UBERON:0007284!2.04e-09!71;UBERON:0004111!8.58e-09!122;UBERON:0000025!8.41e-08!114;UBERON:0003080!2.99e-07!40;UBERON:0002020!6.28e-07!34;UBERON:0002780!8.59e-07!39;UBERON:0001890!8.59e-07!39;UBERON:0006240!8.59e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.32e-18,75;UBERON:0001017,1.31e-17,73;UBERON:0004121,7.99e-16,95;UBERON:0000924,7.99e-16,95;UBERON:0006601,7.99e-16,95;UBERON:0010314,5.15e-15,92;UBERON:0000073,3.43e-12,54;UBERON:0001049,4.87e-11,52;UBERON:0005068,4.87e-11,52;UBERON:0006241,4.87e-11,52;UBERON:0007135,4.87e-11,52;UBERON:0002346,1.13e-10,64;UBERON:0003075,1.13e-10,64;UBERON:0007284,1.13e-10,64;UBERON:0010371,2.15e-09,73;UBERON:0002616,7.86e-09,46;UBERON:0004111,8.58e-09,122;UBERON:0000955,2.07e-08,47;UBERON:0006238,2.07e-08,47;UBERON:0000025,8.41e-08,114;UBERON:0003080,2.99e-07,40;UBERON:0002020,6.28e-07,34;UBERON:0002780,8.59e-07,39;UBERON:0001890,8.59e-07,39;UBERON:0006240,8.59e-07,39 | |||
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| ||
|short_description=p1@AI316807 | |||
}} | }} |
Latest revision as of 20:11, 1 October 2015
Short description: | p1@AI316807 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AI316807_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENSMUST00000033935, ENSMUST00000163774, NM_001012667, NM_001146117, uc009ldd.2, uc009lde.2_5end |
EntrezGene: | AI316807 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 8.94e-17 | 44 |
neurectodermal cell | 8.94e-17 | 44 |
neural cell | 1.48e-16 | 43 |
electrically responsive cell | 6.91e-14 | 39 |
electrically active cell | 6.91e-14 | 39 |
neuron | 4.14e-12 | 33 |
neuronal stem cell | 4.14e-12 | 33 |
neuroblast | 4.14e-12 | 33 |
electrically signaling cell | 4.14e-12 | 33 |
CNS neuron (sensu Vertebrata) | 6.44e-11 | 23 |
neuroblast (sensu Vertebrata) | 6.44e-11 | 23 |
embryonic cell | 1.37e-07 | 70 |
somatic stem cell | 9.09e-07 | 91 |
multi fate stem cell | 9.09e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.32e-18 | 75 |
central nervous system | 1.31e-17 | 73 |
ectoderm-derived structure | 7.99e-16 | 95 |
ectoderm | 7.99e-16 | 95 |
presumptive ectoderm | 7.99e-16 | 95 |
structure with developmental contribution from neural crest | 5.15e-15 | 92 |
regional part of nervous system | 3.43e-12 | 54 |
neural tube | 4.87e-11 | 52 |
neural rod | 4.87e-11 | 52 |
future spinal cord | 4.87e-11 | 52 |
neural keel | 4.87e-11 | 52 |
neurectoderm | 1.13e-10 | 64 |
neural plate | 1.13e-10 | 64 |
presumptive neural plate | 1.13e-10 | 64 |
ecto-epithelium | 2.15e-09 | 73 |
regional part of brain | 7.86e-09 | 46 |
anatomical conduit | 8.58e-09 | 122 |
brain | 2.07e-08 | 47 |
future brain | 2.07e-08 | 47 |
tube | 8.41e-08 | 114 |
anterior neural tube | 2.99e-07 | 40 |
gray matter | 6.28e-07 | 34 |
regional part of forebrain | 8.59e-07 | 39 |
forebrain | 8.59e-07 | 39 |
future forebrain | 8.59e-07 | 39 |