Personal tools

FFCP PHASE1:Mm9::chr8:120807507..120807518,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr8:120807507..120807518,+
|DHSsupport=NA
|short_description=p8@Cdh13
|DPIdataset=NA
|description=CAGE_peak_8_at_Cdh13_5end
|association_with_transcript=-114bp_to_ENSMUST00000117160_5end
|EntrezGene=12554
|EntrezGene=12554
|HGNC=
|HGNC=
|MCL_coexpression_id=3658
|TSSclassifier=NA
|UniProt=Q9WTR5
|UniProt=Q9WTR5
|association_with_transcript=-114bp_to_ENSMUST00000117160_5end
|cluster_id=chr8:120807507..120807518,+
|description=CAGE_peak_8_at_Cdh13_5end
|id=chr8:120807507..120807518,+
|ontology_enrichment_celltype=CL:0000117!5.57e-13!23;CL:0000337!5.57e-13!23;CL:0000540!1.20e-08!33;CL:0000047!1.20e-08!33;CL:0000031!1.20e-08!33;CL:0000404!1.20e-08!33;CL:0002319!3.95e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,6.65e-21,23;CL:0000337,6.65e-21,23;CL:0000540,4.84e-13,33;CL:0000047,4.84e-13,33;CL:0000031,4.84e-13,33;CL:0000404,4.84e-13,33;CL:0002609,7.28e-12,6;CL:0000393,2.71e-10,39;CL:0000211,2.71e-10,39;CL:0002319,6.71e-09,43;CL:0000221,1.36e-08,44;CL:0000133,1.36e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.43e-18!52;UBERON:0005068!1.43e-18!52;UBERON:0006241!1.43e-18!52;UBERON:0007135!1.43e-18!52;UBERON:0002020!6.62e-18!34;UBERON:0001017!2.54e-16!73;UBERON:0005743!2.54e-16!73;UBERON:0000073!7.56e-16!75;UBERON:0001016!7.56e-16!75;UBERON:0000955!2.31e-15!50;UBERON:0006238!2.31e-15!50;UBERON:0003080!5.52e-15!40;UBERON:0002616!6.68e-15!49;UBERON:0002780!1.47e-14!39;UBERON:0001890!1.47e-14!39;UBERON:0006240!1.47e-14!39;UBERON:0004121!2.35e-14!102;UBERON:0000924!2.35e-14!102;UBERON:0006601!2.35e-14!102;UBERON:0002346!3.56e-14!71;UBERON:0003075!3.56e-14!71;UBERON:0007284!3.56e-14!71;UBERON:0002791!4.02e-14!29;UBERON:0003528!4.02e-14!29;UBERON:0001893!4.02e-14!29;UBERON:0003056!1.23e-13!49;UBERON:0000033!1.39e-13!63;UBERON:0000956!3.34e-10!21;UBERON:0001869!3.34e-10!21;UBERON:0000203!3.34e-10!21;UBERON:0000025!1.60e-09!114;UBERON:0004111!2.33e-09!122;UBERON:0002619!7.20e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.89e-25,34;UBERON:0003528,9.74e-18,29;UBERON:0002791,9.74e-18,29;UBERON:0001893,9.74e-18,29;UBERON:0001049,2.86e-17,52;UBERON:0005068,2.86e-17,52;UBERON:0006241,2.86e-17,52;UBERON:0007135,2.86e-17,52;UBERON:0000073,2.35e-16,54;UBERON:0002780,4.15e-15,39;UBERON:0001890,4.15e-15,39;UBERON:0006240,4.15e-15,39;UBERON:0003080,1.39e-14,40;UBERON:0001017,2.53e-13,73;UBERON:0001016,9.29e-13,75;UBERON:0002346,1.16e-12,64;UBERON:0003075,1.16e-12,64;UBERON:0007284,1.16e-12,64;UBERON:0010371,2.27e-12,73;UBERON:0000956,3.47e-12,21;UBERON:0001869,3.47e-12,21;UBERON:0000203,3.47e-12,21;UBERON:0002616,6.35e-12,46;UBERON:0000955,1.51e-11,47;UBERON:0006238,1.51e-11,47;UBERON:0003056,7.60e-11,49;UBERON:0004121,3.31e-10,95;UBERON:0000924,3.31e-10,95;UBERON:0006601,3.31e-10,95;UBERON:0001948,6.99e-10,5;UBERON:0002315,6.99e-10,5;UBERON:0010314,3.76e-09,92;UBERON:0002619,8.58e-09,17;UBERON:0002240,3.99e-08,6;UBERON:0005174,3.99e-08,6;UBERON:0001137,3.99e-08,6;UBERON:0000025,2.29e-07,114;UBERON:0004111,5.83e-07,122;UBERON:0002420,7.89e-07,8;UBERON:0007245,7.89e-07,8;UBERON:0010009,7.89e-07,8;UBERON:0010011,7.89e-07,8;UBERON:0000454,7.89e-07,8
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.893618560807968,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,1.01158230429799,2.11596391708813,1.26766280701236,0,0,0,0,0,0.299600110518405,0,4.04389488003063,3.37514845829227,4.20649922702764,5.14171771926846,2.42955395046775,2.9397791811589,2.97120960156533,7.35375029288017,0,0.638436690425939,0.921639199537461,1.05509030184155,1.37231465403614,0.52091337055676,0.558365998002762,1.12552522006336,1.22238598221448,2.94628585473668,3.70166370077668,2.60959224155421,0,0.302286240427142,2.6087803983151,0,0,0,0,0,0.421333260395256,0.340860645156116,0.779358013808606,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0,1.44599356919912,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0.878342391034642,0,0,0,0,0,0.898743836428936,4.11750542536764,11.4345460422707,0.521472960576829,1.27857728665165,2.49345653471472,2.59586020908412,0,0,0,0.210441855886474,0.130120442962704,0,0,0.452114453507145,0.544291993210623,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0.351902248327898,0.219195732427575,0.556094498451196,1.39300866608867,0.61734640922383,0,0,0,0,0.621377317606506,0.469052119962192,0.36012412292203,0.710234206755631,0.787056926989615,0.462801338662135,0.697601834251224,0.804820204198858,0.700592054203017,1.81015834904829,1.47750717671186,1.62137619091711,0.730999937126662,0.439100230582101,0.536825675041487,0.630869845692382,1.44066457330998,0,0,0.426576501070468,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0.624075346229121,0,0,0,0.554259570499814,0.189491411770485,0.325929952884052,0,0.234690248288502,0,0,0,0.315270288212382,0,0.318909537314974,0,0.172684981865896,0.144649058581512,0,0,1.47529281905711,0.275936746304732,0.963303539926752,0.820481806145422,0,0.504941854408746,0.315508219416257,0,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0,0.963963949265421,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0.258717367565509,0.428674070063185,0.177340233642274,0.356737635204141,0.164549020602121,0.608929898229199,0.469343416127421,0,0,0.8244312647074,1.77610869365496,0.603129249281559,0.119372344003136,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.432021363287205,0.418176592028937,1.52853794622324,0.134864346384821,0.41326727862668,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295379054349154,0,0.0762068066549998,0.100826185136841,0,0,0,0.906921534460845,0,0,0,0.772758376128762,0,0.183151624267265,1.07184189539533,0,3.3885110557024,0.460325236507177,2.29158205375759,2.23409137046794,0.685082519770642,0.755393897389701,2.02506750069542,0,1.35942722695261,1.55328093525546,0,0,0,0.486213434136588,0.209613162627982,0.919217542250071,1.77797382241292,0.824140228955577,0.64183841918363,0.758091635291392,0.760437899670719,1.13175804831646,0.842773567228942,0.960377286073039,1.37845125493472,1.42888107384922,0.463537303779422,1.15745532278223,0.412085900803307,0.441596760403192,1.02860775715625,1.4198064492747,0.476872379894642,1.45346416632329,0.941093804153306,0.761531471025089,0.365855945745545,0.789209134313529,1.08643291076689,1.12228454331548,0.711810108745045,1.0835493061312,0.409231043169689,0.619747364743864,0.771626443924566,1.99848462350357,2.10538447600868,1.07435527024149,0.57386499620653,0.661774257358546,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.893618560807968,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,1.01158230429799,2.11596391708813,1.26766280701236,0,0,0,0,0,0.299600110518405,0,4.04389488003063,3.37514845829227,4.20649922702764,5.14171771926846,2.42955395046775,2.9397791811589,2.97120960156533,7.35375029288017,0,0.638436690425939,0.921639199537461,1.05509030184155,1.37231465403614,0.52091337055676,0.558365998002762,1.12552522006336,1.22238598221448,2.94628585473668,3.70166370077668,2.60959224155421,0,0.302286240427142,2.6087803983151,0,0,0,0,0,0.421333260395256,0.340860645156116,0.779358013808606,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0,1.44599356919912,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0.878342391034642,0,0,0,0,0,0.898743836428936,4.11750542536764,11.4345460422707,0.521472960576829,1.27857728665165,2.49345653471472,2.59586020908412,0,0,0,0.210441855886474,0.130120442962704,0,0,0.452114453507145,0.544291993210623,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0.351902248327898,0.219195732427575,0.556094498451196,1.39300866608867,0.61734640922383,0,0,0,0,0.621377317606506,0.469052119962192,0.36012412292203,0.710234206755631,0.787056926989615,0.462801338662135,0.697601834251224,0.804820204198858,0.700592054203017,1.81015834904829,1.47750717671186,1.62137619091711,0.730999937126662,0.439100230582101,0.536825675041487,0.630869845692382,1.44066457330998,0,0,0.426576501070468,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0.624075346229121,0,0,0,0.554259570499814,0.189491411770485,0.325929952884052,0,0.234690248288502,0,0,0,0.315270288212382,0,0.318909537314974,0,0.172684981865896,0.144649058581512,0,0,1.47529281905711,0.275936746304732,0.963303539926752,0.820481806145422,0,0.504941854408746,0.315508219416257,0,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0,0.963963949265421,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0.258717367565509,0.428674070063185,0.177340233642274,0.356737635204141,0.164549020602121,0.608929898229199,0.469343416127421,0,0,0.8244312647074,1.77610869365496,0.603129249281559,0.119372344003136,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.432021363287205,0.418176592028937,1.52853794622324,0.134864346384821,0.41326727862668,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295379054349154,0,0.0762068066549998,0.100826185136841,0,0,0,0.906921534460845,0,0,0,0.772758376128762,0,0.183151624267265,1.07184189539533,0,3.3885110557024,0.460325236507177,2.29158205375759,2.23409137046794,0.685082519770642,0.755393897389701,2.02506750069542,0,1.35942722695261,1.55328093525546,0,0,0,0.486213434136588,0.209613162627982,0.919217542250071,1.77797382241292,0.824140228955577,0.64183841918363,0.758091635291392,0.760437899670719,1.13175804831646,0.842773567228942,0.960377286073039,1.37845125493472,1.42888107384922,0.463537303779422,1.15745532278223,0.412085900803307,0.441596760403192,1.02860775715625,1.4198064492747,0.476872379894642,1.45346416632329,0.941093804153306,0.761531471025089,0.365855945745545,0.789209134313529,1.08643291076689,1.12228454331548,0.711810108745045,1.0835493061312,0.409231043169689,0.619747364743864,0.771626443924566,1.99848462350357,2.10538447600868,1.07435527024149,0.57386499620653,0.661774257358546,0.231867835620421
|short_description=p8@Cdh13
}}
}}

Latest revision as of 14:33, 1 October 2015

Short description:p8@Cdh13
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Cdh13_5end
Coexpression cluster:MCL_coexpression_mm9:3658
Association with transcript: -114bp_to_ENSMUST00000117160_5end
EntrezGene:Cdh13
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Cdh13

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F111.43
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.62
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter2.89e-2534
brain grey matter9.74e-1829
regional part of telencephalon9.74e-1829
telencephalon9.74e-1829
neural tube2.86e-1752
neural rod2.86e-1752
future spinal cord2.86e-1752
neural keel2.86e-1752
regional part of nervous system2.35e-1654
regional part of forebrain4.15e-1539
forebrain4.15e-1539
future forebrain4.15e-1539
anterior neural tube1.39e-1440
central nervous system2.53e-1373
nervous system9.29e-1375
neurectoderm1.16e-1264
neural plate1.16e-1264
presumptive neural plate1.16e-1264
ecto-epithelium2.27e-1273
cerebral cortex3.47e-1221
cerebral hemisphere3.47e-1221
pallium3.47e-1221
regional part of brain6.35e-1246
brain1.51e-1147
future brain1.51e-1147
pre-chordal neural plate7.60e-1149
ectoderm-derived structure3.31e-1095
ectoderm3.31e-1095
presumptive ectoderm3.31e-1095
regional part of spinal cord6.99e-105
gray matter of spinal cord6.99e-105
structure with developmental contribution from neural crest3.76e-0992
regional part of cerebral cortex8.58e-0917
spinal cord3.99e-086
dorsal region element3.99e-086
dorsum3.99e-086
tube2.29e-07114
anatomical conduit5.83e-07122
basal ganglion7.89e-078
nuclear complex of neuraxis7.89e-078
aggregate regional part of brain7.89e-078
collection of basal ganglia7.89e-078
cerebral subcortex7.89e-078
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:120807507..120807518,%2B&oldid=4307523"