Personal tools

FFCP PHASE1:Mm9::chr7:72301391..72301447,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr7:72301391..72301447,-
|DHSsupport=NA
|short_description=p1@Fam189a1
|DPIdataset=NA
|description=CAGE_peak_1_at_Fam189a1_5end
|association_with_transcript=0bp_to_ENSMUST00000107504,NM_183087,uc009hgl.2_5end
|EntrezGene=70638
|EntrezGene=70638
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q6A044
|UniProt=Q6A044
|association_with_transcript=0bp_to_ENSMUST00000107504,NM_183087,uc009hgl.2_5end
|cluster_id=chr7:72301391..72301447,-
|description=CAGE_peak_1_at_Fam189a1_5end
|id=chr7:72301391..72301447,-
|ontology_enrichment_celltype=CL:0000117!7.41e-11!23;CL:0000337!7.41e-11!23;CL:0000540!6.18e-07!33;CL:0000047!6.18e-07!33;CL:0000031!6.18e-07!33;CL:0000404!6.18e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,5.12e-14,23;CL:0000337,5.12e-14,23;CL:0000540,2.75e-08,33;CL:0000047,2.75e-08,33;CL:0000031,2.75e-08,33;CL:0000404,2.75e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.81e-24!52;UBERON:0005068!1.81e-24!52;UBERON:0006241!1.81e-24!52;UBERON:0007135!1.81e-24!52;UBERON:0000955!4.72e-23!50;UBERON:0006238!4.72e-23!50;UBERON:0002616!2.09e-22!49;UBERON:0001017!7.05e-22!73;UBERON:0005743!7.05e-22!73;UBERON:0000033!2.41e-21!63;UBERON:0000073!5.38e-21!75;UBERON:0001016!5.38e-21!75;UBERON:0002346!6.76e-19!71;UBERON:0003075!6.76e-19!71;UBERON:0007284!6.76e-19!71;UBERON:0003080!7.18e-19!40;UBERON:0003056!1.12e-18!49;UBERON:0002780!2.65e-18!39;UBERON:0001890!2.65e-18!39;UBERON:0006240!2.65e-18!39;UBERON:0002020!1.09e-16!34;UBERON:0004121!2.38e-14!102;UBERON:0000924!2.38e-14!102;UBERON:0006601!2.38e-14!102;UBERON:0002791!1.49e-13!29;UBERON:0003528!1.49e-13!29;UBERON:0001893!1.49e-13!29;UBERON:0000153!1.94e-11!94;UBERON:0007811!5.01e-10!86;UBERON:0000956!4.49e-09!21;UBERON:0001869!4.49e-09!21;UBERON:0000203!4.49e-09!21;UBERON:0002021!1.58e-08!10;UBERON:0000411!1.58e-08!10;UBERON:0001950!1.58e-08!10;UBERON:0002619!2.27e-08!17;UBERON:0000025!1.12e-07!114;UBERON:0004111!2.35e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.86e-32,54;UBERON:0001049,7.25e-30,52;UBERON:0005068,7.25e-30,52;UBERON:0006241,7.25e-30,52;UBERON:0007135,7.25e-30,52;UBERON:0001017,1.94e-27,73;UBERON:0001016,3.64e-26,75;UBERON:0000955,2.71e-25,47;UBERON:0006238,2.71e-25,47;UBERON:0002346,3.45e-25,64;UBERON:0003075,3.45e-25,64;UBERON:0007284,3.45e-25,64;UBERON:0003080,7.82e-25,40;UBERON:0002616,2.00e-24,46;UBERON:0002780,4.91e-24,39;UBERON:0001890,4.91e-24,39;UBERON:0006240,4.91e-24,39;UBERON:0003056,4.96e-22,49;UBERON:0002020,9.98e-22,34;UBERON:0010371,1.28e-21,73;UBERON:0004121,1.53e-20,95;UBERON:0000924,1.53e-20,95;UBERON:0006601,1.53e-20,95;UBERON:0003528,2.46e-17,29;UBERON:0002791,2.46e-17,29;UBERON:0001893,2.46e-17,29;UBERON:0010314,4.36e-14,92;UBERON:0002021,1.97e-11,10;UBERON:0000411,1.97e-11,10;UBERON:0001950,1.97e-11,10;UBERON:0000956,4.30e-11,21;UBERON:0001869,4.30e-11,21;UBERON:0000203,4.30e-11,21;UBERON:0002619,1.69e-10,17;UBERON:0002420,1.05e-07,8;UBERON:0007245,1.05e-07,8;UBERON:0010009,1.05e-07,8;UBERON:0010011,1.05e-07,8;UBERON:0000454,1.05e-07,8;UBERON:0001894,1.40e-07,10;UBERON:0006222,1.40e-07,10;UBERON:0000025,2.92e-07,114;UBERON:0004111,5.48e-07,122
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.65407546914134,0.659058548203415,0,0,1.43752564364972,0,0,0,0,0,0,8.09265843438391,7.93486468908049,6.97214543856797,0,0.889294796111139,0,0,0,0,0,1.03689612308478,1.4850653216486,0.210324961351382,10.2834354385369,5.07997644188711,1.10241719293459,0.0958454710182364,2.75765635983006,5.50579404996943,9.3211756802187,8.60196586234964,9.62769900430415,8.5083508550241,7.29278718779464,7.81712397203867,3.37657566019008,8.70950012327818,11.1958862479994,8.82704420954438,10.8111678578674,0,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.68510327831436,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0.808834249737046,0.441683036920787,0.484875253135222,0,0.585561594023094,3.14170060220183,0,0,0,0,6.44099749440738,10.980014467647,5.02617408451458,27.2904182701874,22.5029602450691,9.55825004973976,12.3303359931496,0.407357455401265,0.995255764880744,1.0108910337347,0,0.130120442962704,0.919608417733892,1.44049703844279,0.753524089178575,1.49680298132921,0.896796041993948,1.40552586839593,1.55222022443409,0,2.08016688184601,5.98233822157426,3.94552318369635,5.00485048606076,3.83077383174383,1.85203922767149,0.59710280045548,0,0,0,0.414251545071004,1.17263029990548,0,1.18372367792605,0.590292695242212,0.154267112887378,0,0.268273401399619,0,0.16455984991348,0,0,0.146199987425332,0,0,23.7627641877464,13.377599609307,0,0,1.2797295032114,0.928946687441754,1.67527699718721,1.21010114774006,0.444756087689741,0.380451252225118,0,0.823494773620054,0.251335208800269,0.994782360205754,0.58489226135736,0,0.216138049874694,0,0.379335801906163,0.228497025219458,1.1270773567308,0.610953983535943,0.193952487167626,0.420814919341911,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0.287696137450811,1.13494658742525,0,1.43768206527355,0.372140947668503,0,0,0,0,0.184753190166605,0,0.488894929326078,0.339490171550376,0.938760993154008,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0.664394068946325,0.159454768657487,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,7.70642831941401,7.85318300167761,0,0.504941854408746,0,0.780877488593277,0.430846795465598,0,0.222798674082394,0,0,0,0.395287777946524,8.03303291054518,0.99358059645788,1.24645922567079,0.325773918707152,0.494910368917606,0,0.971122544619926,0,0,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,7.83011093233712,1.26042765821917,1.94038025674132,3.21505552547388,3.72414490648775,2.49716344642899,3.29098041204242,4.87143918583359,0,0,1.32317038832977,0,1.45317984026315,0.965006798850494,0,0,0,7.23158677840988,0,0.206386867963223,0.370389054739423,0.188368457004691,0,0,0,0,0.138199973804424,0,0.632671987162271,0.406638934253697,0.648032044930808,0.418176592028937,0,0.404593039154462,0.330613822901344,0,0.259229946583586,0,0.56369293868419,0.747582730219894,0.165458490457098,0,0.516639293910924,0.506868376472335,0.469428954583016,0.911430693907651,0.314578033277133,0,0,0,0.202725215290164,0.102710957164827,0.25984164595559,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.563047426353546,0,0,1.00314420807073,17.5073071211291,12.889106622201,14.8952833494243,20.9660882459299,23.2928056722018,14.3524840504043,17.550585006027,15.7612421128477,16.7662691324156,13.9795284172991,0.415149390336707,2.39414924040619,2.90247129782028,1.94485373654635,0.838452650511929,1.47074806760011,1.55572709461131,1.64828045791115,1.60459604795908,2.27427490587418,2.5347929989024,2.26351609663291,1.87283014939765,2.81710670581425,2.75690250986944,4.28664322154766,1.85414921511769,2.70072908649187,3.70877310722976,1.47198920134397,0.342869252385415,0.887379030796687,2.38436189947321,1.59881058295561,1.41164070622996,2.62305284464197,1.64635175585495,1.57841826862706,1.62964936615034,1.12228454331548,2.01679530811096,2.1670986122624,2.86461730218783,1.85924209423159,1.15743966588685,5.49583271463481,1.87145286756327,1.93383948643468,0.57386499620653,1.32354851471709,0
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.65407546914134,0.659058548203415,0,0,1.43752564364972,0,0,0,0,0,0,8.09265843438391,7.93486468908049,6.97214543856797,0,0.889294796111139,0,0,0,0,0,1.03689612308478,1.4850653216486,0.210324961351382,10.2834354385369,5.07997644188711,1.10241719293459,0.0958454710182364,2.75765635983006,5.50579404996943,9.3211756802187,8.60196586234964,9.62769900430415,8.5083508550241,7.29278718779464,7.81712397203867,3.37657566019008,8.70950012327818,11.1958862479994,8.82704420954438,10.8111678578674,0,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.68510327831436,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0.808834249737046,0.441683036920787,0.484875253135222,0,0.585561594023094,3.14170060220183,0,0,0,0,6.44099749440738,10.980014467647,5.02617408451458,27.2904182701874,22.5029602450691,9.55825004973976,12.3303359931496,0.407357455401265,0.995255764880744,1.0108910337347,0,0.130120442962704,0.919608417733892,1.44049703844279,0.753524089178575,1.49680298132921,0.896796041993948,1.40552586839593,1.55222022443409,0,2.08016688184601,5.98233822157426,3.94552318369635,5.00485048606076,3.83077383174383,1.85203922767149,0.59710280045548,0,0,0,0.414251545071004,1.17263029990548,0,1.18372367792605,0.590292695242212,0.154267112887378,0,0.268273401399619,0,0.16455984991348,0,0,0.146199987425332,0,0,23.7627641877464,13.377599609307,0,0,1.2797295032114,0.928946687441754,1.67527699718721,1.21010114774006,0.444756087689741,0.380451252225118,0,0.823494773620054,0.251335208800269,0.994782360205754,0.58489226135736,0,0.216138049874694,0,0.379335801906163,0.228497025219458,1.1270773567308,0.610953983535943,0.193952487167626,0.420814919341911,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0.287696137450811,1.13494658742525,0,1.43768206527355,0.372140947668503,0,0,0,0,0.184753190166605,0,0.488894929326078,0.339490171550376,0.938760993154008,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0.664394068946325,0.159454768657487,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,7.70642831941401,7.85318300167761,0,0.504941854408746,0,0.780877488593277,0.430846795465598,0,0.222798674082394,0,0,0,0.395287777946524,8.03303291054518,0.99358059645788,1.24645922567079,0.325773918707152,0.494910368917606,0,0.971122544619926,0,0,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,7.83011093233712,1.26042765821917,1.94038025674132,3.21505552547388,3.72414490648775,2.49716344642899,3.29098041204242,4.87143918583359,0,0,1.32317038832977,0,1.45317984026315,0.965006798850494,0,0,0,7.23158677840988,0,0.206386867963223,0.370389054739423,0.188368457004691,0,0,0,0,0.138199973804424,0,0.632671987162271,0.406638934253697,0.648032044930808,0.418176592028937,0,0.404593039154462,0.330613822901344,0,0.259229946583586,0,0.56369293868419,0.747582730219894,0.165458490457098,0,0.516639293910924,0.506868376472335,0.469428954583016,0.911430693907651,0.314578033277133,0,0,0,0.202725215290164,0.102710957164827,0.25984164595559,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.563047426353546,0,0,1.00314420807073,17.5073071211291,12.889106622201,14.8952833494243,20.9660882459299,23.2928056722018,14.3524840504043,17.550585006027,15.7612421128477,16.7662691324156,13.9795284172991,0.415149390336707,2.39414924040619,2.90247129782028,1.94485373654635,0.838452650511929,1.47074806760011,1.55572709461131,1.64828045791115,1.60459604795908,2.27427490587418,2.5347929989024,2.26351609663291,1.87283014939765,2.81710670581425,2.75690250986944,4.28664322154766,1.85414921511769,2.70072908649187,3.70877310722976,1.47198920134397,0.342869252385415,0.887379030796687,2.38436189947321,1.59881058295561,1.41164070622996,2.62305284464197,1.64635175585495,1.57841826862706,1.62964936615034,1.12228454331548,2.01679530811096,2.1670986122624,2.86461730218783,1.85924209423159,1.15743966588685,5.49583271463481,1.87145286756327,1.93383948643468,0.57386499620653,1.32354851471709,0
|short_description=p1@Fam189a1
}}
}}

Latest revision as of 00:45, 27 September 2015

Short description:p1@Fam189a1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Fam189a1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000107504, NM_183087, uc009hgl.2_5end
EntrezGene:Fam189a1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Fam189a1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C38.09
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.63
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.51
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.71
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.81
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.44
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F15.03
cortex, adult.CNhs10473.12-14D527.29
cortex, neonate N30.CNhs11107.1392-42F222.50
diencephalon, adult.CNhs10482.20-12F29.56
diencephalon, neonate N30.CNhs11201.1388-42B212.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E25.98
forelimb, embryo E14.CNhs10577.413-26A83.95
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E823.76
hippocampus, neonate N00.CNhs11228.627-43G113.38
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.71
medulla oblongata, neonate N30.CNhs11200.1396-42A37.85
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.97
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A117.51
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.89
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.90
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.97
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.76
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.77
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.12e-1423
neuroblast (sensu Vertebrata)5.12e-1423
neuron2.75e-0833
neuronal stem cell2.75e-0833
neuroblast2.75e-0833
electrically signaling cell2.75e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.86e-3254
neural tube7.25e-3052
neural rod7.25e-3052
future spinal cord7.25e-3052
neural keel7.25e-3052
central nervous system1.94e-2773
nervous system3.64e-2675
brain2.71e-2547
future brain2.71e-2547
neurectoderm3.45e-2564
neural plate3.45e-2564
presumptive neural plate3.45e-2564
anterior neural tube7.82e-2540
regional part of brain2.00e-2446
regional part of forebrain4.91e-2439
forebrain4.91e-2439
future forebrain4.91e-2439
pre-chordal neural plate4.96e-2249
gray matter9.98e-2234
ecto-epithelium1.28e-2173
ectoderm-derived structure1.53e-2095
ectoderm1.53e-2095
presumptive ectoderm1.53e-2095
brain grey matter2.46e-1729
regional part of telencephalon2.46e-1729
telencephalon2.46e-1729
structure with developmental contribution from neural crest4.36e-1492
occipital lobe1.97e-1110
visual cortex1.97e-1110
neocortex1.97e-1110
cerebral cortex4.30e-1121
cerebral hemisphere4.30e-1121
pallium4.30e-1121
regional part of cerebral cortex1.69e-1017
basal ganglion1.05e-078
nuclear complex of neuraxis1.05e-078
aggregate regional part of brain1.05e-078
collection of basal ganglia1.05e-078
cerebral subcortex1.05e-078
diencephalon1.40e-0710
future diencephalon1.40e-0710
tube2.92e-07114
anatomical conduit5.48e-07122
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:72301391..72301447,-&oldid=4283416"