FFCP PHASE1:Mm9::chr7:3644363..3644430,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:3644363..3644430,- to FFCP PHASE1:Mm9::chr7:3644363..3644430,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=77582 | |EntrezGene=77582 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=D3YU33 | |UniProt=D3YU33 | ||
|association_with_transcript=-107bp_to_uc009evr.1_5end | |||
|cluster_id=chr7:3644363..3644430,- | |||
|description=CAGE_peak_2_at_Mboat7_5end | |||
|id=chr7:3644363..3644430,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.41e-15!52;UBERON:0005068!5.41e-15!52;UBERON:0006241!5.41e-15!52;UBERON:0007135!5.41e-15!52;UBERON:0001017!3.27e-14!73;UBERON:0005743!3.27e-14!73;UBERON:0000955!3.49e-14!50;UBERON:0006238!3.49e-14!50;UBERON:0002616!1.07e-13!49;UBERON:0000073!6.11e-13!75;UBERON:0001016!6.11e-13!75;UBERON:0004121!6.41e-12!102;UBERON:0000924!6.41e-12!102;UBERON:0006601!6.41e-12!102;UBERON:0000033!1.18e-11!63;UBERON:0002020!1.24e-10!34;UBERON:0002346!2.28e-10!71;UBERON:0003075!2.28e-10!71;UBERON:0007284!2.28e-10!71;UBERON:0003080!1.66e-09!40;UBERON:0002780!6.35e-09!39;UBERON:0001890!6.35e-09!39;UBERON:0006240!6.35e-09!39;UBERON:0002791!2.42e-08!29;UBERON:0003528!2.42e-08!29;UBERON:0001893!2.42e-08!29;UBERON:0004111!1.34e-07!122;UBERON:0002021!2.01e-07!10;UBERON:0000411!2.01e-07!10;UBERON:0001950!2.01e-07!10;UBERON:0003056!2.59e-07!49;UBERON:0000025!4.92e-07!114;UBERON:0003076!7.14e-07!12;UBERON:0003057!7.14e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.00e-16,54;UBERON:0001049,4.93e-15,52;UBERON:0005068,4.93e-15,52;UBERON:0006241,4.93e-15,52;UBERON:0007135,4.93e-15,52;UBERON:0001017,1.98e-14,73;UBERON:0001016,3.29e-13,75;UBERON:0000955,1.95e-12,47;UBERON:0006238,1.95e-12,47;UBERON:0004121,5.82e-12,95;UBERON:0000924,5.82e-12,95;UBERON:0006601,5.82e-12,95;UBERON:0002616,5.95e-12,46;UBERON:0010371,2.95e-11,73;UBERON:0002020,8.31e-11,34;UBERON:0002346,2.42e-10,64;UBERON:0003075,2.42e-10,64;UBERON:0007284,2.42e-10,64;UBERON:0003080,2.20e-09,40;UBERON:0002780,8.63e-09,39;UBERON:0001890,8.63e-09,39;UBERON:0006240,8.63e-09,39;UBERON:0003528,1.97e-08,29;UBERON:0002791,1.97e-08,29;UBERON:0001893,1.97e-08,29;UBERON:0002021,1.13e-07,10;UBERON:0000411,1.13e-07,10;UBERON:0001950,1.13e-07,10;UBERON:0003076,4.22e-07,12;UBERON:0003057,4.22e-07,12;UBERON:0003056,7.76e-07,49 | |||
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| ||
|short_description=p2@Mboat7 | |||
}} | }} |
Latest revision as of 16:56, 26 September 2015
Short description: | p2@Mboat7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mboat7_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -107bp_to_uc009evr.1_5end |
EntrezGene: | Mboat7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.00e-16 | 54 |
neural tube | 4.93e-15 | 52 |
neural rod | 4.93e-15 | 52 |
future spinal cord | 4.93e-15 | 52 |
neural keel | 4.93e-15 | 52 |
central nervous system | 1.98e-14 | 73 |
nervous system | 3.29e-13 | 75 |
brain | 1.95e-12 | 47 |
future brain | 1.95e-12 | 47 |
ectoderm-derived structure | 5.82e-12 | 95 |
ectoderm | 5.82e-12 | 95 |
presumptive ectoderm | 5.82e-12 | 95 |
regional part of brain | 5.95e-12 | 46 |
ecto-epithelium | 2.95e-11 | 73 |
gray matter | 8.31e-11 | 34 |
neurectoderm | 2.42e-10 | 64 |
neural plate | 2.42e-10 | 64 |
presumptive neural plate | 2.42e-10 | 64 |
anterior neural tube | 2.20e-09 | 40 |
regional part of forebrain | 8.63e-09 | 39 |
forebrain | 8.63e-09 | 39 |
future forebrain | 8.63e-09 | 39 |
brain grey matter | 1.97e-08 | 29 |
regional part of telencephalon | 1.97e-08 | 29 |
telencephalon | 1.97e-08 | 29 |
occipital lobe | 1.13e-07 | 10 |
visual cortex | 1.13e-07 | 10 |
neocortex | 1.13e-07 | 10 |
posterior neural tube | 4.22e-07 | 12 |
chordal neural plate | 4.22e-07 | 12 |
pre-chordal neural plate | 7.76e-07 | 49 |