FFCP PHASE1:Mm9::chr7:17500809..17500825,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:17500809..17500825,- to FFCP PHASE1:Mm9::chr7:17500809..17500825,-: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=741 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:17500809..17500825,- | |||
|description=CAGE_peak_at_chr7:17500809..17500825,- | |||
|id=chr7:17500809..17500825,- | |||
|ontology_enrichment_celltype=CL:0000117!9.70e-11!23;CL:0000337!9.70e-11!23;CL:0000393!9.34e-09!39;CL:0000211!9.34e-09!39;CL:0000055!1.67e-08!50;CL:0000221!1.23e-07!44;CL:0000133!1.23e-07!44;CL:0002319!2.16e-07!43;CL:0000540!7.21e-07!33;CL:0000047!7.21e-07!33;CL:0000031!7.21e-07!33;CL:0000404!7.21e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.44e-11,23;CL:0000337,7.44e-11,23;CL:0000393,7.78e-09,39;CL:0000211,7.78e-09,39;CL:0000221,1.48e-07,44;CL:0000133,1.48e-07,44;CL:0002319,2.60e-07,43;CL:0000540,6.33e-07,33;CL:0000047,6.33e-07,33;CL:0000031,6.33e-07,33;CL:0000404,6.33e-07,33;CL:0002321,7.23e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.59e-16!75;UBERON:0001016!8.59e-16!75;UBERON:0001017!9.03e-16!73;UBERON:0005743!9.03e-16!73;UBERON:0001049!2.95e-15!52;UBERON:0005068!2.95e-15!52;UBERON:0006241!2.95e-15!52;UBERON:0007135!2.95e-15!52;UBERON:0002616!1.30e-13!49;UBERON:0000955!1.56e-13!50;UBERON:0006238!1.56e-13!50;UBERON:0002020!1.19e-12!34;UBERON:0002346!7.83e-12!71;UBERON:0003075!7.83e-12!71;UBERON:0007284!7.83e-12!71;UBERON:0000033!8.68e-11!63;UBERON:0003080!1.88e-10!40;UBERON:0002780!4.08e-10!39;UBERON:0001890!4.08e-10!39;UBERON:0006240!4.08e-10!39;UBERON:0002791!1.33e-09!29;UBERON:0003528!1.33e-09!29;UBERON:0001893!1.33e-09!29;UBERON:0004121!4.40e-09!102;UBERON:0000924!4.40e-09!102;UBERON:0006601!4.40e-09!102;UBERON:0003056!1.35e-08!49;UBERON:0000956!6.68e-07!21;UBERON:0001869!6.68e-07!21;UBERON:0000203!6.68e-07!21;UBERON:0002021!9.95e-07!10;UBERON:0000411!9.95e-07!10;UBERON:0001950!9.95e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.03e-16,54;UBERON:0001016,8.82e-16,75;UBERON:0001017,9.31e-16,73;UBERON:0001049,3.17e-15,52;UBERON:0005068,3.17e-15,52;UBERON:0006241,3.17e-15,52;UBERON:0007135,3.17e-15,52;UBERON:0002020,1.43e-12,34;UBERON:0002346,3.40e-12,64;UBERON:0003075,3.40e-12,64;UBERON:0007284,3.40e-12,64;UBERON:0002616,7.62e-12,46;UBERON:0000955,8.95e-12,47;UBERON:0006238,8.95e-12,47;UBERON:0010314,2.15e-11,92;UBERON:0003080,2.22e-10,40;UBERON:0002780,4.84e-10,39;UBERON:0001890,4.84e-10,39;UBERON:0006240,4.84e-10,39;UBERON:0003528,1.67e-09,29;UBERON:0002791,1.67e-09,29;UBERON:0001893,1.67e-09,29;UBERON:0004121,3.60e-09,95;UBERON:0000924,3.60e-09,95;UBERON:0006601,3.60e-09,95;UBERON:0010371,5.72e-09,73;UBERON:0003056,1.81e-08,49;UBERON:0002021,8.56e-07,10;UBERON:0000411,8.56e-07,10;UBERON:0001950,8.56e-07,10;UBERON:0000956,8.91e-07,21;UBERON:0001869,8.91e-07,21;UBERON:0000203,8.91e-07,21 | |||
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| ||
|short_description=p@chr7:17500809..17500825,- | |||
}} | }} |
Latest revision as of 16:39, 4 August 2015
Short description: | p@chr7:17500809..17500825, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:17500809..17500825, - |
Coexpression cluster: | MCL_coexpression_mm9:741 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.44e-11 | 23 |
neuroblast (sensu Vertebrata) | 7.44e-11 | 23 |
electrically responsive cell | 7.78e-09 | 39 |
electrically active cell | 7.78e-09 | 39 |
ectodermal cell | 1.48e-07 | 44 |
neurectodermal cell | 1.48e-07 | 44 |
neural cell | 2.60e-07 | 43 |
neuron | 6.33e-07 | 33 |
neuronal stem cell | 6.33e-07 | 33 |
neuroblast | 6.33e-07 | 33 |
electrically signaling cell | 6.33e-07 | 33 |
embryonic cell | 7.23e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.03e-16 | 54 |
nervous system | 8.82e-16 | 75 |
central nervous system | 9.31e-16 | 73 |
neural tube | 3.17e-15 | 52 |
neural rod | 3.17e-15 | 52 |
future spinal cord | 3.17e-15 | 52 |
neural keel | 3.17e-15 | 52 |
gray matter | 1.43e-12 | 34 |
neurectoderm | 3.40e-12 | 64 |
neural plate | 3.40e-12 | 64 |
presumptive neural plate | 3.40e-12 | 64 |
regional part of brain | 7.62e-12 | 46 |
brain | 8.95e-12 | 47 |
future brain | 8.95e-12 | 47 |
structure with developmental contribution from neural crest | 2.15e-11 | 92 |
anterior neural tube | 2.22e-10 | 40 |
regional part of forebrain | 4.84e-10 | 39 |
forebrain | 4.84e-10 | 39 |
future forebrain | 4.84e-10 | 39 |
brain grey matter | 1.67e-09 | 29 |
regional part of telencephalon | 1.67e-09 | 29 |
telencephalon | 1.67e-09 | 29 |
ectoderm-derived structure | 3.60e-09 | 95 |
ectoderm | 3.60e-09 | 95 |
presumptive ectoderm | 3.60e-09 | 95 |
ecto-epithelium | 5.72e-09 | 73 |
pre-chordal neural plate | 1.81e-08 | 49 |
occipital lobe | 8.56e-07 | 10 |
visual cortex | 8.56e-07 | 10 |
neocortex | 8.56e-07 | 10 |
cerebral cortex | 8.91e-07 | 21 |
cerebral hemisphere | 8.91e-07 | 21 |
pallium | 8.91e-07 | 21 |