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FFCP PHASE1:Mm9::chr6:39675447..39675477,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:39675447..39675477,-
|DHSsupport=NA
|short_description=p2@Braf
|DPIdataset=NA
|description=CAGE_peak_2_at_Braf_5end
|association_with_transcript=0bp_to_ENSMUST00000002487,NM_139294,uc009bme.1_5end
|EntrezGene=109880
|EntrezGene=109880
|HGNC=
|HGNC=
|MCL_coexpression_id=663
|TSSclassifier=NA
|UniProt=P28028
|UniProt=P28028
|association_with_transcript=0bp_to_ENSMUST00000002487,NM_139294,uc009bme.1_5end
|cluster_id=chr6:39675447..39675477,-
|description=CAGE_peak_2_at_Braf_5end
|id=chr6:39675447..39675477,-
|ontology_enrichment_celltype=CL:0000117!6.68e-08!23;CL:0000337!6.68e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,6.68e-08,23;CL:0000337,6.68e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!4.69e-13!34;UBERON:0000033!1.07e-11!63;UBERON:0002791!1.96e-11!29;UBERON:0003528!1.96e-11!29;UBERON:0001893!1.96e-11!29;UBERON:0001049!3.00e-11!52;UBERON:0005068!3.00e-11!52;UBERON:0006241!3.00e-11!52;UBERON:0007135!3.00e-11!52;UBERON:0000955!4.84e-11!50;UBERON:0006238!4.84e-11!50;UBERON:0004121!1.65e-10!102;UBERON:0000924!1.65e-10!102;UBERON:0006601!1.65e-10!102;UBERON:0002616!1.86e-10!49;UBERON:0001017!2.69e-09!73;UBERON:0005743!2.69e-09!73;UBERON:0002346!3.18e-09!71;UBERON:0003075!3.18e-09!71;UBERON:0007284!3.18e-09!71;UBERON:0003056!6.47e-09!49;UBERON:0003080!8.61e-09!40;UBERON:0000073!8.66e-09!75;UBERON:0001016!8.66e-09!75;UBERON:0002780!2.55e-08!39;UBERON:0001890!2.55e-08!39;UBERON:0006240!2.55e-08!39;UBERON:0007811!3.27e-08!86;UBERON:0000956!4.38e-08!21;UBERON:0001869!4.38e-08!21;UBERON:0000203!4.38e-08!21;UBERON:0002021!1.34e-07!10;UBERON:0000411!1.34e-07!10;UBERON:0001950!1.34e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.69e-13,34;UBERON:0000073,4.46e-12,54;UBERON:0010371,4.58e-12,73;UBERON:0003528,1.96e-11,29;UBERON:0002791,1.96e-11,29;UBERON:0001893,1.96e-11,29;UBERON:0001049,3.05e-11,52;UBERON:0005068,3.05e-11,52;UBERON:0006241,3.05e-11,52;UBERON:0007135,3.05e-11,52;UBERON:0004121,4.26e-11,95;UBERON:0000924,4.26e-11,95;UBERON:0006601,4.26e-11,95;UBERON:0002346,4.76e-10,64;UBERON:0003075,4.76e-10,64;UBERON:0007284,4.76e-10,64;UBERON:0000955,1.16e-09,47;UBERON:0006238,1.16e-09,47;UBERON:0001017,2.72e-09,73;UBERON:0002616,4.21e-09,46;UBERON:0003056,6.47e-09,49;UBERON:0003080,8.61e-09,40;UBERON:0001016,8.77e-09,75;UBERON:0002780,2.55e-08,39;UBERON:0001890,2.55e-08,39;UBERON:0006240,2.55e-08,39;UBERON:0000956,4.38e-08,21;UBERON:0001869,4.38e-08,21;UBERON:0000203,4.38e-08,21;UBERON:0002021,1.34e-07,10;UBERON:0000411,1.34e-07,10;UBERON:0001950,1.34e-07,10
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26044,3.9305261474312,3.50647300600534,6.94289028092822,6.54389854960074,5.57344385154709,8.07741107013003,32.694190443683,1.94371509857172,1.32366792365678,4.66682852025714,3.61647505737647,4.05494701177868,5.51579021635044,5.59878854828985,7.96931017635402,10.6297013163443,23.3304305068871,4.10814456816632,4.25722952109345,2.05421914329655,2.5984164595559,3.04345382634718,2.38417625737518,5.4087952283986,4.43068581523732,2.52416124870369,6.55378537232999,6.15039729334727,6.04238860586465,5.8689223400601,6.89573722871257,4.0811469050738,1.10992976687032,1.07656627931371,0.335769232728157,10.0458588896739,5.06742683718191,7.3260649706906,6.00231461421384,9.02829787263654,22.0253218620656,20.2543104063158,21.7700295106971,16.8416118696814,29.4585483501376,23.4172108190807,27.0009000092722,20.2644541450899,25.3759749031155,30.0300980816056,4.56664329370377,4.78829848081237,4.09760653809922,4.61902762429759,3.98265008993166,5.69914876195044,5.11167473943715,4.12070114477788,5.13470735346904,5.05394423527595,5.32306529769503,5.09291121742406,5.24392441831341,6.6586158501064,7.40917549527411,5.23923060411381,5.33067899346335,6.94473193669338,5.35711671044299,6.03515572551029,6.17164654293748,4.79184676630211,5.00715998889374,4.94177816549917,3.95259397744389,5.33072029717562,4.75612729469209,8.15516105457313,5.83957689537206,5.05028044491965,5.93175090620871,5.02372860115374,5.32000356120596,7.2820315357404,6.36591816237767,6.49507502638659,3.97683734357194,7.09074478359384,4.97349663378993,3.97064554415128,5.33296021926969
|phase1_expression=8.32774004944929,3.48975407639361,3.63999391511629,1.81478526784098,1.50268718983904,3.69334398206158,2.80335168714631,5.93967287831251,10.2775767170717,9.12851652655775,7.0199366972457,7.17949430958028,4.62241970814255,4.02133851127388,4.33042690360362,3.64455481301687,3.49780939064073,5.99378114180652,6.99283611389268,4.66828616977833,15.0526623567394,3.87234709683453,2.61199789138935,2.07990149631429,2.52350209173887,2.8711598205751,3.4460959692726,3.01659725760245,1.14014051673824,3.02436155711917,1.99557459589774,5.08024538767705,1.23012957516914,0,2.88851619751275,2.32728503501889,3.47087905646027,16.3227335987394,10.9386948233332,17.7998072951091,29.4115744015507,19.8083190637949,16.5073520030592,2.39203954153597,2.63580021170738,2.0190142737785,0.782391344348039,1.74420125104357,2.85592037554813,3.11087838518853,1.1198913730029,1.43752564364972,4.86569557567435,10.8804321301702,7.73015738027667,3.8588915405392,3.72493471920384,4.12537673821954,10.7227724255587,5.28990979272033,6.97214543856797,1.35537812827653,4.4464739805557,2.6996991518442,0.988866362566974,4.9733608046227,2.09720077362883,2.68952813725088,11.509546966241,8.23536223823313,6.94072372459561,10.2834354385369,5.52171352379034,9.67677313798137,6.99671938433125,4.5960939330501,8.8092704799511,22.0899094887375,22.4265538554115,11.4741070325269,6.58711033937349,11.4600941522487,12.2840519560608,12.380777420697,12.9878510610289,12.374400589894,10.6778760599327,11.5567656411686,4.7707501799906,2.79614772395106,10.1452571045587,4.30211938490693,6.79971333707751,5.39703191637817,4.54843492213368,4.48026887097336,4.49422144421606,2.72688516124892,1.81850203222008,1.06001872353102,7.32385782838739,2.56652954828636,0,0,1.94841936910093,0.760079596425296,2.02209778005913,6.62266502370548,8.2860122767095,7.27366481417641,3.46970653532272,4.87144765299426,3.68984795609694,3.91878865436819,6.70255630673517,4.39833069653864,5.43828929015623,8.6759614151947,6.19227386364912,4.69123864847487,5.07935492458905,7.27312879702833,3.72783522436244,21.958559775866,21.5730108017859,5.62005521458901,11.5022519525683,2.39961092397363,7.24300294316469,19.1732018438173,21.5025283324754,16.8376831831238,24.6830534673033,21.9915293304084,20.1554403222773,22.3892943033506,3.36069900706044,6.22034853050465,14.6579199891531,6.52369753248069,2.99277018814219,2.98872735763515,4.50155324513373,5.42537344208574,9.11689088627793,7.55870949680614,8.62055865949505,11.6416516832557,2.37124792226126,3.02569728268511,3.16712023495108,3.06874025398605,3.61461423993277,4.52727816478817,2.67516777330327,3.38358253591438,2.1066395619397,2.31613116403244,4.54661599032948,4.34964122324554,1.64168241986767,2.70093092191522,3.31442629819294,3.14822770795846,2.93107514486019,2.32533944750408,2.41446061259657,5.02090972178829,3.78487654801005,2.95501435342371,5.91802309684747,3.94739966048397,3.95190207523891,4.69722465661301,26.0759536219518,12.657267322652,5.61711931072457,4.7601101999438,2.34617075588757,3.94802342162745,4.89696353023955,3.22693639397348,3.55804870151792,2.28270751335071,2.84717436926707,4.44687177754829,4.27269854960458,5.57078121715222,4.48417400373976,3.59527763461689,5.40345124686736,3.78368419183298,1.70701110857774,5.1411830674378,2.25415471346161,4.88763186828754,2.71533482034676,5.82127305089644,5.81776141543167,5.75679577120448,5.18095801876537,5.05928372079382,3.55743152504579,3.00321190288969,2.94838492669805,2.24862112384854,3.44862206360455,4.3411888755435,4.07401362850272,5.17853047411459,4.70192157647603,3.84385978463314,11.5014565221884,5.95425516269605,1.87222603868736,3.03094653536534,3.04975602987251,2.41221760681684,8.49864674766381,2.65287976478679,4.4000543639347,2.20668611507745,2.34690248288502,5.02518772325447,4.52282917683426,7.41507861859636,8.6699329258405,5.97954662051692,9.8861956567642,6.882259218061,8.80693407516067,6.50920763616802,1.50791283939272,1.63171705145613,4.42587845717133,5.24279817978992,17.9816660786327,18.1678114217915,4.91804836130026,3.28212205365685,1.89304931649754,3.12350995437311,4.30846795465598,2.86762557543062,4.67877215573028,7.07691326972081,3.23848561339915,4.67609372658099,8.69633111482352,30.5255250600717,6.10342366395555,1.42452482933804,6.02681749608232,6.59880491890142,13.2745138339963,2.91336763385978,1.209294227859,2.82907619633847,2.36241514304618,8.9156192903739,9.04499026088774,5.45300594216258,3.92147116223193,9.16506598013866,4.21674434299995,4.12542172992747,6.46835250932197,4.32146625675145,1.4229455216103,1.28602221018955,2.83744373827638,3.92411398724555,3.78462747384878,4.56697423671899,2.3467170806371,4.2366414172764,9.48272111636336,12.366468970611,8.39615018818709,7.72005439080395,9.07229814423837,12.6388492803697,4.37221254944776,27.4429446975554,4.95525554313773,2.47664241555867,2.77791791054568,2.44878994106098,3.96413260390973,4.11800711771741,14.7881234094654,11.47601909054,10.3649980353318,2.86401185404534,2.53068794864908,4.87966721104437,3.02414954301044,3.76358932826044,3.9305261474312,3.50647300600534,6.94289028092822,6.54389854960074,5.57344385154709,8.07741107013003,32.694190443683,1.94371509857172,1.32366792365678,4.66682852025714,3.61647505737647,4.05494701177868,5.51579021635044,5.59878854828985,7.96931017635402,10.6297013163443,23.3304305068871,4.10814456816632,4.25722952109345,2.05421914329655,2.5984164595559,3.04345382634718,2.38417625737518,5.4087952283986,4.43068581523732,2.52416124870369,6.55378537232999,6.15039729334727,6.04238860586465,5.8689223400601,6.89573722871257,4.0811469050738,1.10992976687032,1.07656627931371,0.335769232728157,10.0458588896739,5.06742683718191,7.3260649706906,6.00231461421384,9.02829787263654,22.0253218620656,20.2543104063158,21.7700295106971,16.8416118696814,29.4585483501376,23.4172108190807,27.0009000092722,20.2644541450899,25.3759749031155,30.0300980816056,4.56664329370377,4.78829848081237,4.09760653809922,4.61902762429759,3.98265008993166,5.69914876195044,5.11167473943715,4.12070114477788,5.13470735346904,5.05394423527595,5.32306529769503,5.09291121742406,5.24392441831341,6.6586158501064,7.40917549527411,5.23923060411381,5.33067899346335,6.94473193669338,5.35711671044299,6.03515572551029,6.17164654293748,4.79184676630211,5.00715998889374,4.94177816549917,3.95259397744389,5.33072029717562,4.75612729469209,8.15516105457313,5.83957689537206,5.05028044491965,5.93175090620871,5.02372860115374,5.32000356120596,7.2820315357404,6.36591816237767,6.49507502638659,3.97683734357194,7.09074478359384,4.97349663378993,3.97064554415128,5.33296021926969
|short_description=p2@Braf
}}
}}

Latest revision as of 04:09, 27 September 2015

Short description:p2@Braf
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Braf_5end
Coexpression cluster:MCL_coexpression_mm9:663
Association with transcript: 0bp_to_ENSMUST00000002487, NM_139294, uc009bme.1_5end
EntrezGene:Braf
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Braf

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.13
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.18
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.62
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.02
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.99
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.99
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.05
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I23.02
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G816.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H317.80
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G929.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H219.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.64
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.88
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C310.72
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.51
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.68
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F322.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D722.43
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.47
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.56
Mouse Schwann, donor1.CNhs12507.11728-123D94.77
Mouse Schwann, donor2.CNhs12573.11746-123F92.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.15
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.32
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.62
accessory axillary lymph node, adult.CNhs10475.1063-29H98.29
adrenal gland, adult.CNhs10508.49-24D77.27
adrenal gland, embryo E14.CNhs11038.406-44C53.47
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F53.92
adrenal gland, neonate N00.CNhs11191.1311-23C16.70
adrenal gland, neonate N25.CNhs11223.1377-27I34.40
amnion, adult pregnant day17.5.CNhs10488.583-22A85.44
aorta, adult.CNhs10498.46-23H18.68
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F54.69
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B221.96
cerebellum, neonate N30.CNhs11135.1395-42I221.57
colon, adult.CNhs10468.36-18H75.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C711.50
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.24
corpora quadrigemina, adult.CNhs10501.16-22A419.17
corpus striatum, adult.CNhs10487.19-21D821.50
corpus striatum, neonate N00.CNhs11226.630-43F116.84
cortex, adult.CNhs10473.12-14D524.68
cortex, neonate N30.CNhs11107.1392-42F221.99
diencephalon, adult.CNhs10482.20-12F220.16
diencephalon, neonate N30.CNhs11201.1388-42B222.39
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.36
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.22
epididymis, adult.CNhs10490.58-23B214.66
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C62.99
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C94.50
eyeball, embryo E17.CNhs11023.1261-18D45.43
eyeball, neonate N00.CNhs11207.633-15C69.12
eyeball, neonate N01.CNhs11140.1532-43E77.56
eyeball, neonate N02.CNhs11205.1551-44G88.62
eyeball, neonate N16.CNhs11188.777-19A211.64
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E23.17
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.55
heart, embryo E11.CNhs10586.331-24E94.35
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D43.31
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C62.93
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E35.02
heart, neonate N03.CNhs11221.1349-25I23.78
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G15.92
heart, neonate N20.CNhs11127.821-26I63.95
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D24.70
hippocampus, adult.CNhs10478.13-16E826.08
hippocampus, neonate N00.CNhs11228.627-43G112.66
intestinal mucosa, adult.CNhs10506.860-29I35.62
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D53.95
intestine, embryo E15.CNhs10602.976-16D84.90
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E94.45
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G13.78
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F85.14
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I24.89
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G75.82
kidney, neonate N10.CNhs11206.758-6D55.82
kidney, neonate N20.CNhs11113.832-19I15.76
kidney, neonate N25.CNhs11122.1353-25F35.18
kidney, neonate N30.CNhs11203.1385-42H15.06
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F83.00
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F44.70
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H13.05
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B18.50
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F84.40
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A65.03
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C67.42
lung, neonate N06.CNhs11212.683-20E58.67
lung, neonate N07.CNhs11111.715-19A35.98
lung, neonate N10.CNhs11219.750-23E69.89
lung, neonate N20.CNhs11109.822-18A46.88
lung, neonate N25.CNhs11119.1359-25C78.81
lung, neonate N30.CNhs11133.1394-42H26.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H25.24
medulla oblongata, adult.CNhs10477.17-12C217.98
medulla oblongata, neonate N30.CNhs11200.1396-42A318.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.92
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I930.53
ovary, adult.CNhs10507.91-2I76.10
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I46.03
oviduct, adult pregnant day01.CNhs10500.988-6G66.60
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E52.83
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I78.92
pancreas, neonate N00.CNhs11105.645-26G99.04
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B69.17
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E64.32
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G34.24
prostate, adult.CNhs10470.859-1F89.48
skin, adult.CNhs10492.30-1C312.37
skin, neonate N00.CNhs11124.650-25G48.40
skin, neonate N03.CNhs11215.662-22H37.72
skin, neonate N06.CNhs11097.693-20I59.07
skin, neonate N10.CNhs11108.762-6C412.64
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C927.44
spleen, adult.CNhs10465.25-2G24.96
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H13.96
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.36
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G84.88
stomach, embryo E16.CNhs11022.459-17D43.02
stomach, embryo E17.CNhs11006.1035-18D53.76
stomach, embryo E18.CNhs10999.1286-20C63.93
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A96.94
stomach, neonate N25.CNhs11104.1355-25E46.54
stomach, neonate N30.CNhs11134.1386-42I15.57
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G532.69
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G54.67
testis, embryo E17.CNhs11029.486-18I53.62
testis, embryo E18.CNhs11027.503-18G54.05
testis, neonate N00.CNhs11189.1300-22B75.52
testis, neonate N07.CNhs11222.726-26I45.60
testis, neonate N10.CNhs11204.763-44D97.97
testis, neonate N20.CNhs11110.839-18H310.63
testis, neonate N30.CNhs11130.1391-42E223.33
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I22.05
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F85.41
thymus, neonate N03.CNhs11137.2104-43C74.43
thymus, neonate N06.CNhs11197.681-26C42.52
thymus, neonate N07.CNhs11211.713-19D36.55
thymus, neonate N10.CNhs11194.748-24E46.15
thymus, neonate N20.CNhs11186.820-7A26.04
thymus, neonate N25.CNhs11125.1362-25G75.87
thymus, neonate N30.CNhs11132.1393-42G26.90
tongue, adult.CNhs10499.32-1B44.08
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E410.05
uterus, adult pregnant day19.CNhs10497.590-15F55.07
uterus, adult.CNhs10509.92-27E57.33
vagina, adult.CNhs10502.89-27D56.00
vesicular gland, adult.CNhs10491.51-27F89.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A220.25
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.77
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A429.46
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A523.42
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A825.38
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A930.03
whole body, embryo E11.CNhs11014.324-5I84.57
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H24.10
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F25.70
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.79
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.93
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.28
whole body, embryo E17.5.CNhs10513.490-9F96.37
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C27.09
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B45.33





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.68e-0823
neuroblast (sensu Vertebrata)6.68e-0823

Uber anatomy
Ontology termp-valuen
gray matter4.69e-1334
regional part of nervous system4.46e-1254
ecto-epithelium4.58e-1273
brain grey matter1.96e-1129
regional part of telencephalon1.96e-1129
telencephalon1.96e-1129
neural tube3.05e-1152
neural rod3.05e-1152
future spinal cord3.05e-1152
neural keel3.05e-1152
ectoderm-derived structure4.26e-1195
ectoderm4.26e-1195
presumptive ectoderm4.26e-1195
neurectoderm4.76e-1064
neural plate4.76e-1064
presumptive neural plate4.76e-1064
brain1.16e-0947
future brain1.16e-0947
central nervous system2.72e-0973
regional part of brain4.21e-0946
pre-chordal neural plate6.47e-0949
anterior neural tube8.61e-0940
nervous system8.77e-0975
regional part of forebrain2.55e-0839
forebrain2.55e-0839
future forebrain2.55e-0839
cerebral cortex4.38e-0821
cerebral hemisphere4.38e-0821
pallium4.38e-0821
occipital lobe1.34e-0710
visual cortex1.34e-0710
neocortex1.34e-0710
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