FFCP PHASE1:Mm9::chr6:31167664..31167668,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr6:31167664..31167668,- to FFCP PHASE1:Mm9::chr6:31167664..31167668,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=967 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:31167664..31167668,- | |||
|description=CAGE_peak_at_chr6:31167664..31167668,- | |||
|id=chr6:31167664..31167668,- | |||
|ontology_enrichment_celltype=CL:0000838!5.45e-08!12;CL:0000084!2.63e-07!11;CL:0000827!2.63e-07!11;CL:0002031!3.09e-07!25;CL:0000542!7.01e-07!13;CL:0000051!7.01e-07!13;CL:0000738!8.44e-07!17;CL:0002087!8.44e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.25e-11,12;CL:0000542,3.86e-10,13;CL:0000051,3.86e-10,13;CL:0000738,3.96e-10,17;CL:0002087,3.96e-10,17;CL:0000084,6.23e-10,11;CL:0000827,6.23e-10,11;CL:0002031,1.35e-09,25;CL:0000791,1.88e-08,9;CL:0000789,1.88e-08,9;CL:0002420,1.88e-08,9;CL:0002419,1.88e-08,9;CL:0000790,1.88e-08,9;CL:0000624,4.37e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!1.26e-10!154;UBERON:0004111!6.41e-10!122;UBERON:0000025!4.14e-08!114;UBERON:0000955!5.94e-08!50;UBERON:0006238!5.94e-08!50;UBERON:0007023!5.98e-08!51;UBERON:0002021!6.32e-08!10;UBERON:0000411!6.32e-08!10;UBERON:0001950!6.32e-08!10;UBERON:0001017!1.79e-07!73;UBERON:0005743!1.79e-07!73;UBERON:0002616!1.82e-07!49;UBERON:0000033!3.65e-07!63;UBERON:0000073!4.00e-07!75;UBERON:0001016!4.00e-07!75;UBERON:0001049!7.37e-07!52;UBERON:0005068!7.37e-07!52;UBERON:0006241!7.37e-07!52;UBERON:0007135!7.37e-07!52;UBERON:0007811!7.82e-07!86;UBERON:0000475!8.60e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.47e-14,10;UBERON:0000411,4.47e-14,10;UBERON:0001950,4.47e-14,10;UBERON:0000955,4.00e-10,47;UBERON:0006238,4.00e-10,47;UBERON:0004111,9.29e-10,122;UBERON:0002616,2.72e-09,46;UBERON:0000025,4.82e-09,114;UBERON:0002619,1.51e-08,17;UBERON:0000073,1.74e-08,54;UBERON:0001049,2.27e-08,52;UBERON:0005068,2.27e-08,52;UBERON:0006241,2.27e-08,52;UBERON:0007135,2.27e-08,52;UBERON:0003528,7.50e-08,29;UBERON:0002791,7.50e-08,29;UBERON:0001893,7.50e-08,29;UBERON:0000956,1.26e-07,21;UBERON:0001869,1.26e-07,21;UBERON:0000203,1.26e-07,21;UBERON:0007023,1.41e-07,51;UBERON:0002780,1.63e-07,39;UBERON:0001890,1.63e-07,39;UBERON:0006240,1.63e-07,39;UBERON:0003080,3.31e-07,40;UBERON:0002346,4.51e-07,64;UBERON:0003075,4.51e-07,64;UBERON:0007284,4.51e-07,64 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,10.3298658753261,2.67498572088167,4.44722600011788,0.856089841127525,0.398860794976682,7.87523357683546,7.69299541287177,0.666219523631325,0.404950534779652,0,2.5236973228659,3.01651753932625,1.27316895539409,0.850432901510698,1.39007331681239,1.04479915655574,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.811015449756117,0.734187008646726,0.782391344348039,0.218025156380447,0.219686182734472,0.58328969722285,0.279972843250725,0,4.53013036355888,10.1550699881588,10.4189077734164,1.02903774414379,0.573066879877513,1.54701627683233,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0.210324961351382,0.285650984403804,0.441737081903227,0,0,0,1.10115880999389,1.0214987046815,0.614426133024974,0,0.182975287204819,0,0.558365998002762,2.8138130501584,1.98637722109853,0.294628585473668,0.284743361598206,0,0.227178579999552,0,2.89864488701678,0,1.3599426674155,2.15881276655127,0.649776417447669,2.24013443548668,0.280888840263504,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0.506719730950197,0,0.79928715803342,2.07150306917737,1.33597925158342,0,0,0,0.150722640552623,0.352766121407114,0.376999773989026,0.988779870937496,0.722996784599558,0,0,0.220841518460394,0.969750506270444,0,1.75668478206928,2.09446706813455,0.255457055208591,0.11981512450592,0,0.127070227073065,0.599162557619291,2.28750301409313,0,1.91206752211504,2.04572365864264,1.0389402227978,3.0825839982874,0,0.622034853050465,1.76905930903572,2.10441855886474,0,0,0,0,0.136072998302656,0,0.187403449119458,1.29351685369508,0,0,0,0.219195732427575,0,0,0,0,0.702213187313235,0.51469581422943,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0,0.492502392237286,0.56748166682099,0.877199924551994,1.3173006917463,1.61047702512446,1.47202963994889,0.205809224758569,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0.126473074248515,0.295220295959204,0.941992367048249,1.1105744752962,2.07516838961004,0,0,0,0,0,0,0,0.810676133875177,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,1.25578189465339,1.92977408545347,1.66277871149944,0,0,0,0,0,0,0.195133647857799,0.472905432318573,0.8858587585951,0,2.45794972073607,1.55416483679306,1.3018415272336,1.50791283939272,1.63171705145613,0.491764273019036,0.275936746304732,1.60550589987792,2.22702204525186,0,0.757412781613119,0.631016438832513,0.780877488593277,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.790575555893047,3.21321316421807,0.567760340833074,0,0,1.31976098378028,0,0,0,0.188605079755898,0,0,0.775284879504663,0.363533729477506,0.356497378384721,0.632073515871632,0,1.03135543248187,3.40439605753788,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.822745103010605,0.913394847343798,0,0.21183207086382,0.441056796109924,0.32977250588296,0.161464426695906,0.0603129249281559,0,0.164140899745061,0.291480836629851,1.48340241608408,0.341741761595705,0.206386867963223,0,0.565105371014073,1.23024804948923,0.915112692826091,0.509935289981566,0.839708713941948,0.690999869022119,0.954670618015114,0,0,0,0,0,0.134864346384821,0.330613822901344,1.83229159388821,0.388844919875379,1.24267862617385,0,0,0,0.194451188344048,0.258319646955462,0,0,0.2604087696879,0.209718688851422,0.483168241652012,0.864090018773596,0.316011120628178,0,0.308132871494482,0.25984164595559,0,0,0.360586348559907,0.147689527174577,0.201932899896295,0.228620419965,0,0.194915761479505,0.192423683280659,0.116876902181569,1.36038230169127,0.221985953374065,0,0,0.772758376128762,1.12609485270709,0.73260649706906,0.643105137237198,2.50786052017682,1.12950368523413,2.76195141904306,2.29158205375759,4.29632955859219,6.16574267793578,4.5323633843382,6.75022500231806,5.40385443869065,4.07828168085784,7.7664046762773,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0.561142271657738,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,10.3298658753261,2.67498572088167,4.44722600011788,0.856089841127525,0.398860794976682,7.87523357683546,7.69299541287177,0.666219523631325,0.404950534779652,0,2.5236973228659,3.01651753932625,1.27316895539409,0.850432901510698,1.39007331681239,1.04479915655574,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.811015449756117,0.734187008646726,0.782391344348039,0.218025156380447,0.219686182734472,0.58328969722285,0.279972843250725,0,4.53013036355888,10.1550699881588,10.4189077734164,1.02903774414379,0.573066879877513,1.54701627683233,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0.210324961351382,0.285650984403804,0.441737081903227,0,0,0,1.10115880999389,1.0214987046815,0.614426133024974,0,0.182975287204819,0,0.558365998002762,2.8138130501584,1.98637722109853,0.294628585473668,0.284743361598206,0,0.227178579999552,0,2.89864488701678,0,1.3599426674155,2.15881276655127,0.649776417447669,2.24013443548668,0.280888840263504,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0.506719730950197,0,0.79928715803342,2.07150306917737,1.33597925158342,0,0,0,0.150722640552623,0.352766121407114,0.376999773989026,0.988779870937496,0.722996784599558,0,0,0.220841518460394,0.969750506270444,0,1.75668478206928,2.09446706813455,0.255457055208591,0.11981512450592,0,0.127070227073065,0.599162557619291,2.28750301409313,0,1.91206752211504,2.04572365864264,1.0389402227978,3.0825839982874,0,0.622034853050465,1.76905930903572,2.10441855886474,0,0,0,0,0.136072998302656,0,0.187403449119458,1.29351685369508,0,0,0,0.219195732427575,0,0,0,0,0.702213187313235,0.51469581422943,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0,0.492502392237286,0.56748166682099,0.877199924551994,1.3173006917463,1.61047702512446,1.47202963994889,0.205809224758569,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0.126473074248515,0.295220295959204,0.941992367048249,1.1105744752962,2.07516838961004,0,0,0,0,0,0,0,0.810676133875177,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,1.25578189465339,1.92977408545347,1.66277871149944,0,0,0,0,0,0,0.195133647857799,0.472905432318573,0.8858587585951,0,2.45794972073607,1.55416483679306,1.3018415272336,1.50791283939272,1.63171705145613,0.491764273019036,0.275936746304732,1.60550589987792,2.22702204525186,0,0.757412781613119,0.631016438832513,0.780877488593277,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.790575555893047,3.21321316421807,0.567760340833074,0,0,1.31976098378028,0,0,0,0.188605079755898,0,0,0.775284879504663,0.363533729477506,0.356497378384721,0.632073515871632,0,1.03135543248187,3.40439605753788,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.822745103010605,0.913394847343798,0,0.21183207086382,0.441056796109924,0.32977250588296,0.161464426695906,0.0603129249281559,0,0.164140899745061,0.291480836629851,1.48340241608408,0.341741761595705,0.206386867963223,0,0.565105371014073,1.23024804948923,0.915112692826091,0.509935289981566,0.839708713941948,0.690999869022119,0.954670618015114,0,0,0,0,0,0.134864346384821,0.330613822901344,1.83229159388821,0.388844919875379,1.24267862617385,0,0,0,0.194451188344048,0.258319646955462,0,0,0.2604087696879,0.209718688851422,0.483168241652012,0.864090018773596,0.316011120628178,0,0.308132871494482,0.25984164595559,0,0,0.360586348559907,0.147689527174577,0.201932899896295,0.228620419965,0,0.194915761479505,0.192423683280659,0.116876902181569,1.36038230169127,0.221985953374065,0,0,0.772758376128762,1.12609485270709,0.73260649706906,0.643105137237198,2.50786052017682,1.12950368523413,2.76195141904306,2.29158205375759,4.29632955859219,6.16574267793578,4.5323633843382,6.75022500231806,5.40385443869065,4.07828168085784,7.7664046762773,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0.561142271657738,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr6:31167664..31167668,- | |||
}} | }} |
Latest revision as of 14:06, 5 August 2015
Short description: | p@chr6:31167664..31167668, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:31167664..31167668, - |
Coexpression cluster: | MCL_coexpression_mm9:967 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.25e-11 | 12 |
lymphocyte | 3.86e-10 | 13 |
common lymphoid progenitor | 3.86e-10 | 13 |
leukocyte | 3.96e-10 | 17 |
nongranular leukocyte | 3.96e-10 | 17 |
T cell | 6.23e-10 | 11 |
pro-T cell | 6.23e-10 | 11 |
hematopoietic lineage restricted progenitor cell | 1.35e-09 | 25 |
mature alpha-beta T cell | 1.88e-08 | 9 |
alpha-beta T cell | 1.88e-08 | 9 |
immature T cell | 1.88e-08 | 9 |
mature T cell | 1.88e-08 | 9 |
immature alpha-beta T cell | 1.88e-08 | 9 |
CD4-positive, alpha-beta T cell | 4.37e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.47e-14 | 10 |
visual cortex | 4.47e-14 | 10 |
neocortex | 4.47e-14 | 10 |
brain | 4.00e-10 | 47 |
future brain | 4.00e-10 | 47 |
anatomical conduit | 9.29e-10 | 122 |
regional part of brain | 2.72e-09 | 46 |
tube | 4.82e-09 | 114 |
regional part of cerebral cortex | 1.51e-08 | 17 |
regional part of nervous system | 1.74e-08 | 54 |
neural tube | 2.27e-08 | 52 |
neural rod | 2.27e-08 | 52 |
future spinal cord | 2.27e-08 | 52 |
neural keel | 2.27e-08 | 52 |
brain grey matter | 7.50e-08 | 29 |
regional part of telencephalon | 7.50e-08 | 29 |
telencephalon | 7.50e-08 | 29 |
cerebral cortex | 1.26e-07 | 21 |
cerebral hemisphere | 1.26e-07 | 21 |
pallium | 1.26e-07 | 21 |
adult organism | 1.41e-07 | 51 |
regional part of forebrain | 1.63e-07 | 39 |
forebrain | 1.63e-07 | 39 |
future forebrain | 1.63e-07 | 39 |
anterior neural tube | 3.31e-07 | 40 |
neurectoderm | 4.51e-07 | 64 |
neural plate | 4.51e-07 | 64 |
presumptive neural plate | 4.51e-07 | 64 |